BlTCONS00113604 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00113604
Unique NameBlTCONS00113604
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000229:432369..442177-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00113604 ID=BlTCONS00113604|Name=BlTCONS00113604|organism=Branchiostoma lanceolatum|type=mRNA|length=9809bp|location=Sequence derived from alignment at Sc0000229:432369..442177- (Branchiostoma lanceolatum)
TGTCAGGTCTAAATGTCAGCACTTCAGGTGAGGGTCTTCTGTAGTACCGG CAGCCAATTAACAACATGTATACCCAGATAAAGAAGGAATCTTATCCTAC TGACTATTCGTGCCTACCCTATGTTGTACTGCTCACTCAGCAGGCTTTAT AGACTAAATATATTTCAATTAAGTGTGTTGTGATGACGTAATTGGAAAAT GCTGGCCACTTGTCGTATGTTTTCTATACAAGTCAACGATCTGTATGACG TCCGTGCAAAGGCCTGGTGCGAGATCTCTCTCGCAGAGGAGTGTTGTAAG TAGGCAAGATTTGGAGAAACAGTTGTTCGCGTGCCACTGAGGTTGGTACA CGGTACTGAGCGACATTTGGCTTCATTCAGACACCAAGAATGCTGAATTG AACATAAGGGGCTGTCGGTCTCTCCGTTCTAAATCCCGGGTCTCAAGGCA TGGTTGTTTTTCTTTCCTCCAATCTCGTGTCGACTCAAGTAGTGTGCTCA CGTGTGGGGGCCAACCGCAGATTTCTAAAAGTAGAAAAAGAGAGTTCAGT TGTATCGGATACACTTCCACTTGACTCCGAGTGTGTTTTTTTTTTTCTTT TCTGGAAACTGTCACCATTTTATCATGCTGACACTCGGTTGAGGTTCGGG TTTTTCCGAGGTCGTGAAGGTCATATTCACGCTCACAGCTTCTTCTGGCA GCGGAAGTGGGGGTCGGAGGGGGGGGGGTCCCGGATTCACCCCGACGGGT CGCCTTGAGACTGACCGCTGAGAATTGATCTTGCCCAGGCACGGCACACG GCCCGACCCGTCAGGCGGCAGGATTTATCCCCTGTGATTGCACCGCTCGA TGAGTGAAGTGCGTGTTGCCAGTTCTCCTGATTGGGAGCCAGGCCGGGCG AATGTCATATCGACTCGGCATTCTCCGGAGTACGAGCTGCCAGACGTTCC ATAGCTACCACAGAAGAGACAGCTCTANATAGCTACCACGGAAGAGACAG CTCTATTCAACTCGTCGATGTGTTCTACTCGGTAATCGTCGGCCCTGCCG AGACTTTCCGAGCGCGGTTCTGGGACAGAGATTGCGCAGCGGTTCCAGTC ACGTTCGTGGGCCTTATGGGACATGAGAAATAAGCTGTTGAAACGTGGGG CGGCCGTGCGCTGTGCTTAACTTGTCGGGGAGTGAAGGCATCTTAGGACG GCACTTCACTGGCTCTCAGAGTCTCCTTGAGGTGGGTGATTAGGTCAGAG AACGTCTTGTTGAACGCGTGTAACACGTTTGCAATAGAATATAGAAAACC TTANTTGCCATAGAACATAGAAAACCTTAATCCGGAGGTTTACCCAGACC GTGGGATGTGATTTGAATGAGTTTGTAGTTCCTGAAATGGAGCCGAGGAA GGCTGGGACCATTTTTCATCATGGCCAATTATATATAATCACTTAAAATG TTATTCAGAAATTCTAACAACCAGTTGTTTTTCACTTCTATCCTTGATTT ACACGACCTCGTCTTAATTCTGGCAGTTAACATGCAACATCGCGTTAGCA GGCTCATTAAAAGAAGCGTGAAGAAAATTGTCTTTGACAGAGAGGTCGGA AATAATTGGTCGAGGGCAGGCCGATACCCACTGGCATTCTTCCTTTTTTT TGGAAAAAAAATTTCATTAAGGAAACTACATCTGCCCAGTATTTCGCTTT CCTGTACTAATGCGAGATGACGGAGGAGACTTGGGCCATGTCGGAAAGCT AGCAGCATATTTGTTAGCACAACTCAAGAAGGGCGCCAGGCGCAGAACCT TCCGTTCAGCAGGGCGGGCAGGTCGTCCTTTGGCAGGGCCTGCTGTGATT AGAGCTGGTGCGACAACTTCTGGGTGTGCTTCGCTGTTTGCTGGTATGTT TTCTAAATTCTTTGGGCCGACGTAGATTTTGTTAGAACACATGAATATCT CGCAGCCAGCCGGCAGCTCTTTCGTTTCGCGCCGTGAGTTGATACAATGT CTGGTGAGAGGACATGGATCAAACCCAAGCACAGCAGGGCAGCACTTTGT GCCAAGAAAGAATTGTGGGCTTTCCTAGTACAGTAAATCTGGCACTTTAC TGCTGTGCCTCTCACCACACTGTAGAGGCTCTCACGCGGACATTTGGTCA GTTTTGGGTCATTTTCGATCGGGAGATGCAAGTTTTGCACCGTCTTCGCA AATGTTCTCTTCTCATTTCAATCTAAGGCTCTGGCTTTGACCGACATTGT TAATTTAAACCGCTGTTTTTGTGTTACTCTCAAAGTTAAAGCTGGTCATC TACCTTGGCACTAATTAGCTGGGTGGCCTTGCCTGCTATACCCCGGCAAG GCATCCCGCATACCAAGTGATAGTGGCCTTTCCAGTCTTGGGGCAGTCTG TCTACTTCGCACTCGGAAGGTGAATTGCTGACAGAGACTTTTCTTTCTGC TCCGATCATTTCTAATTACTAGTACCCTTTGCGGAGCTGACCTTCGGGTT GAGGAGTCAGGGTACCCAGGAGGATCCCTGCCAGTCTTCTTCCTTTCAAG GCGCTGGTTGCGGCATCTCGTTGTCTTTACATCAGTTTCCTGTATCCCAA GGAGAACCCTTCGCTTCCAAATTAAGGAGACCATGCAATAGAACCAGCCT CGTTAAAGACGGAAGCCCGACATACTAACGATCTAACCGTTCCGGCTGTT TGTAGACAGTCTGTTGGAATATGTGGATTGGGGAGACATTTAAGTTAATG ATGAGAGAACATATCTCATTATACCACTCTGTCAACTTATCTTCCCGTAA AAATTGACCGTCTGTCTGGTAAAGTTATCACGGTCTATAATTAGAAGTCA CTATCTAACATATTATCACGTGAAGTCAAGCATAGCTCGTCCTCCAGGCG TTTCTGAGAAAGTATAGGCGCGTTATCTGTGATCTTGGTCTTCCATTTGT GTCTGTTGGTAGACCTGTCACCGTTGTCAGGCGTCTGATGTACATCGCAC CGAGATGACTGCCTCCACCTGTCTCTATTTATTTCCGCGCGATAAGCTGA TAAAACGCCGGAGCCCTCTGTCACTCTCGTATCTTCAGTGTTACAAGAAA ATAAGACAACGTTTTCACGGCCAGTGGTGATGGTAGTGGCATCCTTGCTG AAAGCATGGGCACGTCGCCAGGTCGTTACCATCTCAGGGCCATGGTCACG GCGCCAGGATTGTTTAAGGTCTGTCAATGTAGACACAAGGAGGCTAGAAC GTATATGCCCATCCCCACCCCCTCCTTACTTGCGCTTCAGGACGAATGTC AACGGAAAGATTCTTTCCGAATCAGTTGGGTTTCCCGCCCAACCCAGAGG GACTTATGGTATTAGCTACTTCCTTGCCCTTTCAAACCCCAGGAGTGTGA TGATAGACTTCGCCGGAATCCTACGCCTTAGGACTTTCCTGCATTCACGG GAAAACTTCTTTTTACTTTACTCAGCAGTATCCTGACCCTACATTGATTG CAGGCCGCGACTTTCCTGGATTAACCATAATTGGATCCAGGGAAGGAAGA GGGCAGCATTCTGTCTTCCCGATCACGGATGAAACATAAGAATAGGACCT TAAGATTGTCATCACGTGACCACGAGCAGTGATCCACAGATAGACGAGAC AACTAGCCCAGACTCTGACTCCGCCCACGACTCAAGTCCATATAAACCAC AGTAATCTTGCAACCTCCCAGTGATCTCGTAAATCGTCCTATTAATTGAG CTCTCAACTTTTAAAGCCCCTTTCCTGCCCGTTTCTGTATACCAAGGAAG AACGTGGTGCAGAGAACACTTACTCCTGTAGATGAAAGTAGAAGTCGTGA GCCGTGAAGATCTTCCCAAGTTTTCTCAGGTAAGTTGTTGAATCTTACCC GTAGATCACCGTACCCCAATTCAGTCTGCTGCAGAGCGGTGTCAGAGTAC ATGACCTGTGTCCCGTCACGTTTTATACTGACTTATTAGTACCCTATAAA GCACTCGAGTAGGACCTTTCGTATGGTCGGAGCTATTATGCTTGTACAAG TGTGTTTATCCAGCAATGAGCGGCTTTGTTACCAGCCCTGACATGGGAGG GACTCGGGCTTTCAGTACACATGAATAAGGCTGGTAGGGTCTGAAAGCCT ACAACAATGGACGTGGGATTCTGTTCCTTCTGGGGTTACAAAGTCGGTGT GCTGTCGGGACGGCGTGGGCAGTTTGGAGCCGAACGTGAACTACAGAAAG TGGTAGTTTGAGGCCTGAAGGGGAGGGCATTAAACCCATGTGTAGTACAG AGAAATCAATCCCACTGTTGTCAATAAGGACCCTACAGCGCCTGTACAGT TCCCAGGTTAGTGAATGTCTGCATGTAGTGGGGCTTGTTCTTGTCAAACT TGGTCGTACTGCCGGTCCATAATCTCTATATGGGCCACGCATATGTTTCC TACGTACGATAATGACTCAGCGTTGATGCCTTGGCGTAAGCACACATGAT ATAAAAAGATTATTTATCCAATGTTGTGTTCTCGCATAAGGAAAACACCA CCTGTCCTTGGATCTCCTCAGCCGGGGAAAGTTAGCCCGTGATCCGTAAA GTGGCGTTTCGTTGCCAAAACGTGTCATAGTCTGACAGATGTGCGACAGA CTAAAGCTCCGGGATCTAGCTCAGCTGCTAGGGAATAAAAACGCTGCCAG CATCTCTGTCAGCACATTTGTGGTATCTACACATTTCTAATCTGACAAGG GACGGTTTAATACCCGTTCTTACTCACTCAAATGTTGCCGAACCTAGGTC AGAAGACCAGTAATGAAACCTATAGGTTGGTATGGGTGGTCTGTCCTGAA AACGTCAAACTTGCCTGCCACAATAAATGTTTTCGTACACGGCGTGAAAC CTTCTCGCCTGGGCCTCACCTCCGTCTCTATGTCATTTTGATTGACAGCT CCATTCCACAACAGTGGACTAAAGAGAAACACAGAGGGGCTGATGTCGCC CGAGTAGGCCCGATCAGCCCACAAACGTCCCCTACATATGAGCTTTCCTT ACGCACATTCTTGTTGTAGTTCCCTTGCTACAACTCAAGGGACACAAAGG ACTATAACACATTGTGCAGAGTGTGTTGGGGGATGTAAGTTTTGACTAAG ACGTCTCAGTGCGTGTATTGTTGACGTATCACTTTCTTGCGATAATCCTT AATTTTGGCAAGCTAATCCAGATCGTTTGGCGCTCAGTGGTGCGTAGCTA TGCAGGCTGTACTCGGAGGGCAGCCTGGATATATTCCATTTCATAGCGAG CTGCCGACGTTCAGAAGGTGACTCACACGGTGTTAAAGTTATCACAGATG AACTCTTCTGAGAGAGTACTCGTGCTTAATGTGGTAAACCACATCCCGGG CTGCCAGTTCAAACGATAGTGGCTTTATCAGATATCGTTCAGAGATCCGG CCTTTCCCACCACAGCCCGTGTGTTGTATTGTGTTTCCCGTGCCACCTGC CGGAGTAGGTAGGGCGTGTTGTCTGCAGTCTGGGAAGGATCGCTAGTGAC GAGAGAAGAAGCCCAGTGGGGATTCCTCCCTGAACTTCTACGGTACGCGG TCTCTTTGCTACTGTCGAACGTGTGGCGATTAGCAACATGTGGTCTACAG CTATTTGTATGTCCTGTGGTAACTATATATACAATATGTCTGTTACACTC AGCTGTCGATAACCCATATCTGACATTGCCCTTCGTAAATTTATGTTTGT AGTCATTTCAAAAGATTATTTCCTGGTGTTCTCCTTTGATCTTTCTTTTG TTCCATTTCCCTTCATCGTTTCATTCCTCTCCTCATTTTTCCCACATCCA TTTCGTTGCTTAATTCCCTGTCTAAGCTCTCTCGGGAGCCTTGAGAATTT CTGTCACACGGAAACTCAAATAAATGTCCGATTGAGCACCTGACTAAACC TCGGTAAGGCGCTCCTGTGCGGAACACAGCGGACACAACACAGGCGTGGG CCCGTGTACACATGATGACGTTTACGACGTGTGAGAACGCCGCTGTATTC GCTTCATCAAACGACACCTTGTTCACCTGCACGGCTCGGGAGAGATTCTA AATCCGGATGTTAAGATGTAGAGTCTGAGTCTAAAGTTTGGCAGCAAGTC AGAACACATCACGTGATCTGCACCGCTATTCTCTCTTCAAAAGGCCCCAG CAAGTTCCCAGACTAGAATGTGTGTGCCTTGGGGAAACAAACACAGACAG GAATACCTTTGACTACCAGCGTCAGATTGTTGGTATTTGTGCAATTTCTT CTGGCGTAACCGCCATATGGCTGATTGATACCCTTGGAAAGAAACGGAAG AGGCCGCATACTTTCCCGATAACATTTAATCCTACATGCCAATAAGAACG GAGTCGAGATGTAATGATGAATGAGACAACGGCGAGAACAATCTTCTGTA TGTATGATTTAATAGATCTTAAGTCATAAATATGGAAAGCAACTGTAAAA TGTGCTGCTATGTTGAACATCAGTCAAAGCTGTCTTCATGAAAACAGGAT GATGAAACGCAGAAGGAATACCTTACAAATTCTACTACCAAAGAACCTTG GGTGGATTTTGGCAACCCTTTGTAAATCAAGATGAAAAAACGCAAACGAA CGTGGGAAAGAGAGTGACAGATGGTAACAGGCGATGTGTCCAGACAAAGT GATACTAATTAGCAGGATGGGGAAAGTATTGTTTAGACTGGGACCATTGA AGGCGTTTAGACGAATTTGGGAGAAACCGGCTTCTTAGAAGAATCTAAAT CGAATCTAGAGTACAAATGGTCGGACCTGGTCCGTGATCACCGTCACAAA TTATAGGCCACAAATCTCTCCGAGTATACCTGTACAGTTAGATTTAGTAG ACATTGGACTTTCTGAGCAATGGGTGTCATTATTTATTACCATGTGTGTG TCTCTGAAACATTTGCCATTTGCGGAAATGCCTAGTGTCAGCCGATTGGT TTTAGGAGGCAGAAAGAAACCGGTCTTTAGCGTCTTCAAGCTAAAGGTTC AGCGCACGGTACGTGAGTTTTTATGCCCCACGAAGACGTTTTCAAAAACA ATCATCAAACCAACCTAGTACCTATAAACGATCTGTGGTTGTAATTTATT GACATATGTGAAGTTGAATATTTTCTTTGCTCATCCCTGCCTGAGACCCC GGTGCGTGTCCTATAAACCCCGGTGCCGGGCGTTTGTTGATAGCTGTAGT GCCCTTACTCCCGCCAAGATGGCACAGCTGTTATCGTCCAAACAAATCCC TCCACTTGCCCTAGGTCTACAATTTGTTCGAAGAATGTCGACCCGGGCCC CGGGCTATTTTTCTTAGATTTTTAGGTCCCGGTCTGTTTCCGCCCTGGTT CAGAACACGGGGCAGCCTGGTGGGGGATGCGGGTGGTGAACTTGTCCGAT ATCTGGGTTCAGACAGACTGGTCCGTGTGGGATTTATTCCGCCTTGATGT GTTCTCTGCTGTTTGTTTGTCTTCTTAAGTTTTGAGCCGGACCTGTATTT GATGTTTATAATTACTGTGAAATCTGTGCGATAATTCCGGTCCATCCGTG GTCGGACCCAATTACGACTCCAAGCGAGGCAGGCCTGACCCTCCGGTAGA ACCACGTCACTAGTCTCCGAAATAAAGCCAACATGTGGGATCTATTACCC TCCCACAGCCCACTCTCTCGGAGAGTGGCGACCTCGTTTGTATAACTCAG TGCTGTCATTGTCTGTCCTCTGTAAAGTCTCCTCAGTACCGTTCAGTAAT CGCATTGTCTCTCCGCTCTTGCAGGTACCGCACACTTCCCAACCTCAGGG AGTCTGGGCCGTTACCATGGCGACGATGGAAGCCATCATTGTGCTGGTGT TCTCCTCGGCTATGATCGTGAGTGGAAAAGTCATTCACCGTGAGGGCTCC GGCGAGAACAAGGTAAACTACGACTGTGAGGACTGTGTGCGGATGGACAA TGGCGGGCTCGACCCAAACAACGTTCCCGTGCGGATAGACGCCGGCGGGC TGGACCCTAACGTTATCGTGCCCGACATGCGCGTGCCCGAGACGTGCGGC TCCTTCGCCATGTCTCACCTGTCCGCAGACGTGCAGAACCTCCAGCGGGA CCTGACCATGGTCCTGGCCAGGTGGGAGAGGATGGAGAACACGCTGGACG AGGTGCAGGAGAACGTGGCGGACGTGCAGCAGAGCGTGGTGGACCAGGGA GGCAAGATTAACACGCTGGAGGTGCAGTTCTCCGAGGCGCTGTCACCAAC GGGCATCAGCGAGGAACACCAGAGGCACAACGGCCGCAAATACCTGCAGG ACAAAGTCATGTCCCTGCAGAAGGACCGAGAAGAGTTCGTGGAGGTCATA GCTAAACAGAACACGCAGATCGCCCATCTGGTGGACACGATACACGGGCT CAGGCAAAACGTCTTCCGTCTGAGGGTCAAGCTCAAGAAAATGTCCGAAG AAGAAGACGAACACAAGGACGGGGATATGAGAGAACTTGAAACCAATTTG ACCGTCATGGAGGAGAACGGGAACGGGTACGTGAACGGGGTTACGCCACA TCCGCGGAAGTGAGGGGGAGAGACTGGGATAAATTCAGATGGATTCTTTC CTTGAGATACTGTTATTGATTGACACAACCGCTACACCTGTGTTTTACTT CAGAGAGCTGACATAGAGTTGAGAACGCAATGCTGTCGTGCTTATGAAAG AACTGCACAGATATAAGCTAGAGGGTTGGACTTGTTGCATGCACTATGCA AGACCCTTGACAAACGTCCAGCGGCCGGTTCCGTGCTGTTGACAGGTTGG ATTAACCTTTCCACTTTCACTTCCACCAGGCCGGACATCGCAGTTTATTT TTGGCAGGCAAATGTTGACCGTTCTTTGTTTAGTTGCTGTTAAAAGCTAC AAGTGGGACCACTTAGTAAGTATCTGACTAAAGCACGTAGTGGCAGGCCG CCGGTCCCCCATGTGTCACTTCAGACGACAGGGTAAAGGAACGTAAAAGA AAAATAGTTGGTAAACACAGATGCGCCATGTTGTGCCTTTGTTGAATTGT GGTACATTATAAGTGAGATTGTATGTATCTGCATAGTTCTTACCAATTTG TCACATCGTAGAGCCGTATTTGTATCTAGTCCACCCGGTGTCTAGCAACA GTCGACTTAATGACGTGTTTACTTGGAAAACAAACGGTCGACCACACCGA CAGAGTGCGAGTGTCAACCCTCTACTGTTACATCTGGACCTCGCGTCTTG ACTCTAGATCAACTTTAAGTTCTTATGTCTTGGCCACATGTGCATTTGGC CTTGTACGTGTACGTTAGGTTGGAATAATTGTGTTCAGATCGTTGAATAG TTTATTATACATACTATATACTAGATTTTGAACTGTTGATATTTTTTTAG TTTCTATCAATTCTATGTCTGCTCTGTGTAGTGACAAGTAACTGTAGTCG TCCTCACTGGGGAAGGCCAAGACGTTTAAAAAAAGAAGATTAGTAGGTGA AGTCAGCGAAACGATCAAAGCTGTGAATCTCACTGTCATGCCAAAATTGT TTTGTAATCGGTTTTCGTTCTGATCCTGTCAGAGCACAGTGGCACAGTCC TTGTATATTTTGTTCTCTATCCAAACAATTAAAAAGAGGATGATTTACAC ATTGTATGATGCGAGAAACGTTTTGTTTGGTGATGTTTGAGAAATGTCAG AACCTCCGAGTCATCTGTCAAGTCTGAGAAAGTTTCTAAACGTGACAACA TGTGTCCCT

Coding sequence (CDS) from alignment at Sc0000229:432369..442177-

>BlTCONS00113604 ID=BlTCONS00113604|Name=BlTCONS00113604|organism=Branchiostoma lanceolatum|type=CDS|length=804bp|location=Sequence derived from alignment at Sc0000229:432369..442177- (Branchiostoma lanceolatum)
ATGTCAGCACTTCAGGTACCGCACACTTCCCAACCTCAGGGAGTCTGGGC
CGTTACCATGGCGACGATGGAAGCCATCATTGTGCTGGTGTTCTCCTCGG
CTATGATCGTGAGTGGAAAAGTCATTCACCGTGAGGGCTCCGGCGAGAAC
AAGGTAAACTACGACTGTGAGGACTGTGTGCGGATGGACAATGGCGGGCT
CGACCCAAACAACGTTCCCGTGCGGATAGACGCCGGCGGGCTGGACCCTA
ACGTTATCGTGCCCGACATGCGCGTGCCCGAGACGTGCGGCTCCTTCGCC
ATGTCTCACCTGTCCGCAGACGTGCAGAACCTCCAGCGGGACCTGACCAT
GGTCCTGGCCAGGTGGGAGAGGATGGAGAACACGCTGGACGAGGTGCAGG
AGAACGTGGCGGACGTGCAGCAGAGCGTGGTGGACCAGGGAGGCAAGATT
AACACGCTGGAGGTGCAGTTCTCCGAGGCGCTGTCACCAACGGGCATCAG
CGAGGAACACCAGAGGCACAACGGCCGCAAATACCTGCAGGACAAAGTCA
TGTCCCTGCAGAAGGACCGAGAAGAGTTCGTGGAGGTCATAGCTAAACAG
AACACGCAGATCGCCCATCTGGTGGACACGATACACGGGCTCAGGCAAAA
CGTCTTCCGTCTGAGGGTCAAGCTCAAGAAAATGTCCGAAGAAGAAGACG
AACACAAGGACGGGGATATGAGAGAACTTGAAACCAATTTGACCGTCATG
GAGGAGAACGGGAACGGGTACGTGAACGGGGTTACGCCACATCCGCGGAA
GTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113604-exon-Sc0000229-1564993656:442151..442177BlTCONS00113604-exon-Sc0000229-1564993656:442151..442177Branchiostoma lanceolatumexon
BlTCONS00113604-exon-Sc0000229-1564993656:432369..434353BlTCONS00113604-exon-Sc0000229-1564993656:432369..434353Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113604BlTCONS00113604-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000229genomeSc0000229:432369..442177 -
Properties
Property NameValue
GeneIDBlCUFF055727