|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000229:432369..440453- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113602 ID=BlTCONS00113602|Name=BlTCONS00113602|organism=Branchiostoma lanceolatum|type=mRNA|length=8085bp|location=Sequence derived from alignment at Sc0000229:432369..440453- (Branchiostoma lanceolatum)
GGAGACTTGGGCCATGTCGGAAAGCTAGCAGCATATTTGTTAGCACAACT
CAAGAAGGGCGCCAGGCGCAGAACCTTCCGTTCAGCAGGGCGGGCAGGTC
GTCCTTTGGCAGGGCCTGCTGTGATTAGAGCTGGTGCGACAACTTCTGGG
TGTGCTTCGCTGTTTGCTGGTATGTTTTCTAAATTCTTTGGGCCGACGTA
GATTTTGTTAGAACACATGAATATCTCGCAGCCAGCCGGCAGCTCTTTCG
TTTCGCGCCGTGAGTTGATACAATGTCTGGTGAGAGGACATGGATCAAAC
CCAAGCACAGCAGGGCAGCACTTTGTGCCAAGAAAGAATTGTGGGCTTTC
CTAGTACAGTAAATCTGGCACTTTACTGCTGTGCCTCTCACCACACTGTA
GAGGCTCTCACGCGGACATTTGGTCAGTTTTGGGTCATTTTCGATCGGGA
GATGCAAGTTTTGCACCGTCTTCGCAAATGTTCTCTTCTCATTTCAATCT
AAGGCTCTGGCTTTGACCGACATTGTTAATTTAAACCGCTGTTTTTGTGT
TACTCTCAAAGTTAAAGCTGGTCATCTACCTTGGCACTAATTAGCTGGGT
GGCCTTGCCTGCTATACCCCGGCAAGGCATCCCGCATACCAAGTGATAGT
GGCCTTTCCAGTCTTGGGGCAGTCTGTCTACTTCGCACTCGGAAGGTGAA
TTGCTGACAGAGACTTTTCTTTCTGCTCCGATCATTTCTAATTACTAGTA
CCCTTTGCGGAGCTGACCTTCGGGTTGAGGAGTCAGGGTACCCAGGAGGA
TCCCTGCCAGTCTTCTTCCTTTCAAGGCGCTGGTTGCGGCATCTCGTTGT
CTTTACATCAGTTTCCTGTATCCCAAGGAGAACCCTTCGCTTCCAAATTA
AGGAGACCATGCAATAGAACCAGCCTCGTTAAAGACGGAAGCCCGACATA
CTAACGATCTAACCGTTCCGGCTGTTTGTAGACAGTCTGTTGGAATATGT
GGATTGGGGAGACATTTAAGTTAATGATGAGAGAACATATCTCATTATAC
CACTCTGTCAACTTATCTTCCCGTAAAAATTGACCGTCTGTCTGGTAAAG
TTATCACGGTCTATAATTAGAAGTCACTATCTAACATATTATCACGTGAA
GTCAAGCATAGCTCGTCCTCCAGGCGTTTCTGAGAAAGTATAGGCGCGTT
ATCTGTGATCTTGGTCTTCCATTTGTGTCTGTTGGTAGACCTGTCACCGT
TGTCAGGCGTCTGATGTACATCGCACCGAGATGACTGCCTCCACCTGTCT
CTATTTATTTCCGCGCGATAAGCTGATAAAACGCCGGAGCCCTCTGTCAC
TCTCGTATCTTCAGTGTTACAAGAAAATAAGACAACGTTTTCACGGCCAG
TGGTGATGGTAGTGGCATCCTTGCTGAAAGCATGGGCACGTCGCCAGGTC
GTTACCATCTCAGGGCCATGGTCACGGCGCCAGGATTGTTTAAGGTCTGT
CAATGTAGACACAAGGAGGCTAGAACGTATATGCCCATCCCCACCCCCTC
CTTACTTGCGCTTCAGGACGAATGTCAACGGAAAGATTCTTTCCGAATCA
GTTGGGTTTCCCGCCCAACCCAGAGGGACTTATGGTATTAGCTACTTCCT
TGCCCTTTCAAACCCCAGGAGTGTGATGATAGACTTCGCCGGAATCCTAC
GCCTTAGGACTTTCCTGCATTCACGGGAAAACTTCTTTTTACTTTACTCA
GCAGTATCCTGACCCTACATTGATTGCAGGCCGCGACTTTCCTGGATTAA
CCATAATTGGATCCAGGGAAGGAAGAGGGCAGCATTCTGTCTTCCCGATC
ACGGATGAAACATAAGAATAGGACCTTAAGATTGTCATCACGTGACCACG
AGCAGTGATCCACAGATAGACGAGACAACTAGCCCAGACTCTGACTCCGC
CCACGACTCAAGTCCATATAAACCACAGTAATCTTGCAACCTCCCAGTGA
TCTCGTAAATCGTCCTATTAATTGAGCTCTCAACTTTTAAAGCCCCTTTC
CTGCCCGTTTCTGTATACCAAGGAAGAACGTGGTGCAGAGAACACTTACT
CCTGTAGATGAAAGTAGAAGTCGTGAGCCGTGAAGATCTTCCCAAGTTTT
CTCAGGTAAGTTGTTGAATCTTACCCGTAGATCACCGTACCCCAATTCAG
TCTGCTGCAGAGCGGTGTCAGAGTACATGACCTGTGTCCCGTCACGTTTT
ATACTGACTTATTAGTACCCTATAAAGCACTCGAGTAGGACCTTTCGTAT
GGTCGGAGCTATTATGCTTGTACAAGTGTGTTTATCCAGCAATGAGCGGC
TTTGTTACCAGCCCTGACATGGGAGGGACTCGGGCTTTCAGTACACATGA
ATAAGGCTGGTAGGGTCTGAAAGCCTACAACAATGGACGTGGGATTCTGT
TCCTTCTGGGGTTACAAAGTCGGTGTGCTGTCGGGACGGCGTGGGCAGTT
TGGAGCCGAACGTGAACTACAGAAAGTGGTAGTTTGAGGCCTGAAGGGGA
GGGCATTAAACCCATGTGTAGTACAGAGAAATCAATCCCACTGTTGTCAA
TAAGGACCCTACAGCGCCTGTACAGTTCCCAGGTTAGTGAATGTCTGCAT
GTAGTGGGGCTTGTTCTTGTCAAACTTGGTCGTACTGCCGGTCCATAATC
TCTATATGGGCCACGCATATGTTTCCTACGTACGATAATGACTCAGCGTT
GATGCCTTGGCGTAAGCACACATGATATAAAAAGATTATTTATCCAATGT
TGTGTTCTCGCATAAGGAAAACACCACCTGTCCTTGGATCTCCTCAGCCG
GGGAAAGTTAGCCCGTGATCCGTAAAGTGGCGTTTCGTTGCCAAAACGTG
TCATAGTCTGACAGATGTGCGACAGACTAAAGCTCCGGGATCTAGCTCAG
CTGCTAGGGAATAAAAACGCTGCCAGCATCTCTGTCAGCACATTTGTGGT
ATCTACACATTTCTAATCTGACAAGGGACGGTTTAATACCCGTTCTTACT
CACTCAAATGTTGCCGAACCTAGGTCAGAAGACCAGTAATGAAACCTATA
GGTTGGTATGGGTGGTCTGTCCTGAAAACGTCAAACTTGCCTGCCACAAT
AAATGTTTTCGTACACGGCGTGAAACCTTCTCGCCTGGGCCTCACCTCCG
TCTCTATGTCATTTTGATTGACAGCTCCATTCCACAACAGTGGACTAAAG
AGAAACACAGAGGGGCTGATGTCGCCCGAGTAGGCCCGATCAGCCCACAA
ACGTCCCCTACATATGAGCTTTCCTTACGCACATTCTTGTTGTAGTTCCC
TTGCTACAACTCAAGGGACACAAAGGACTATAACACATTGTGCAGAGTGT
GTTGGGGGATGTAAGTTTTGACTAAGACGTCTCAGTGCGTGTATTGTTGA
CGTATCACTTTCTTGCGATAATCCTTAATTTTGGCAAGCTAATCCAGATC
GTTTGGCGCTCAGTGGTGCGTAGCTATGCAGGCTGTACTCGGAGGGCAGC
CTGGATATATTCCATTTCATAGCGAGCTGCCGACGTTCAGAAGGTGACTC
ACACGGTGTTAAAGTTATCACAGATGAACTCTTCTGAGAGAGTACTCGTG
CTTAATGTGGTAAACCACATCCCGGGCTGCCAGTTCAAACGATAGTGGCT
TTATCAGATATCGTTCAGAGATCCGGCCTTTCCCACCACAGCCCGTGTGT
TGTATTGTGTTTCCCGTGCCACCTGCCGGAGTAGGTAGGGCGTGTTGTCT
GCAGTCTGGGAAGGATCGCTAGTGACGAGAGAAGAAGCCCAGTGGGGATT
CCTCCCTGAACTTCTACGGTACGCGGTCTCTTTGCTACTGTCGAACGTGT
GGCGATTAGCAACATGTGGTCTACAGCTATTTGTATGTCCTGTGGTAACT
ATATATACAATATGTCTGTTACACTCAGCTGTCGATAACCCATATCTGAC
ATTGCCCTTCGTAAATTTATGTTTGTAGTCATTTCAAAAGATTATTTCCT
GGTGTTCTCCTTTGATCTTTCTTTTGTTCCATTTCCCTTCATCGTTTCAT
TCCTCTCCTCATTTTTCCCACATCCATTTCGTTGCTTAATTCCCTGTCTA
AGCTCTCTCGGGAGCCTTGAGAATTTCTGTCACACGGAAACTCAAATAAA
TGTCCGATTGAGCACCTGACTAAACCTCGGTAAGGCGCTCCTGTGCGGAA
CACAGCGGACACAACACAGGCGTGGGCCCGTGTACACATGATGACGTTTA
CGACGTGTGAGAACGCCGCTGTATTCGCTTCATCAAACGACACCTTGTTC
ACCTGCACGGCTCGGGAGAGATTCTAAATCCGGATGTTAAGATGTAGAGT
CTGAGTCTAAAGTTTGGCAGCAAGTCAGAACACATCACGTGATCTGCACC
GCTATTCTCTCTTCAAAAGGCCCCAGCAAGTTCCCAGACTAGAATGTGTG
TGCCTTGGGGAAACAAACACAGACAGGAATACCTTTGACTACCAGCGTCA
GATTGTTGGTATTTGTGCAATTTCTTCTGGCGTAACCGCCATATGGCTGA
TTGATACCCTTGGAAAGAAACGGAAGAGGCCGCATACTTTCCCGATAACA
TTTAATCCTACATGCCAATAAGAACGGAGTCGAGATGTAATGATGAATGA
GACAACGGCGAGAACAATCTTCTGTATGTATGATTTAATAGATCTTAAGT
CATAAATATGGAAAGCAACTGTAAAATGTGCTGCTATGTTGAACATCAGT
CAAAGCTGTCTTCATGAAAACAGGATGATGAAACGCAGAAGGAATACCTT
ACAAATTCTACTACCAAAGAACCTTGGGTGGATTTTGGCAACCCTTTGTA
AATCAAGATGAAAAAACGCAAACGAACGTGGGAAAGAGAGTGACAGATGG
TAACAGGCGATGTGTCCAGACAAAGTGATACTAATTAGCAGGATGGGGAA
AGTATTGTTTAGACTGGGACCATTGAAGGCGTTTAGACGAATTTGGGAGA
AACCGGCTTCTTAGAAGAATCTAAATCGAATCTAGAGTACAAATGGTCGG
ACCTGGTCCGTGATCACCGTCACAAATTATAGGCCACAAATCTCTCCGAG
TATACCTGTACAGTTAGATTTAGTAGACATTGGACTTTCTGAGCAATGGG
TGTCATTATTTATTACCATGTGTGTGTCTCTGAAACATTTGCCATTTGCG
GAAATGCCTAGTGTCAGCCGATTGGTTTTAGGAGGCAGAAAGAAACCGGT
CTTTAGCGTCTTCAAGCTAAAGGTTCAGCGCACGGTACGTGAGTTTTTAT
GCCCCACGAAGACGTTTTCAAAAACAATCATCAAACCAACCTAGTACCTA
TAAACGATCTGTGGTTGTAATTTATTGACATATGTGAAGTTGAATATTTT
CTTTGCTCATCCCTGCCTGAGACCCCGGTGCGTGTCCTATAAACCCCGGT
GCCGGGCGTTTGTTGATAGCTGTAGTGCCCTTACTCCCGCCAAGATGGCA
CAGCTGTTATCGTCCAAACAAATCCCTCCACTTGCCCTAGGTCTACAATT
TGTTCGAAGAATGTCGACCCGGGCCCCGGGCTATTTTTCTTAGATTTTTA
GGTCCCGGTCTGTTTCCGCCCTGGTTCAGAACACGGGGCAGCCTGGTGGG
GGATGCGGGTGGTGAACTTGTCCGATATCTGGGTTCAGACAGACTGGTCC
GTGTGGGATTTATTCCGCCTTGATGTGTTCTCTGCTGTTTGTTTGTCTTC
TTAAGTTTTGAGCCGGACCTGTATTTGATGTTTATAATTACTGTGAAATC
TGTGCGATAATTCCGGTCCATCCGTGGTCGGACCCAATTACGACTCCAAG
CGAGGCAGGCCTGACCCTCCGGTAGAACCACGTCACTAGTCTCCGAAATA
AAGCCAACATGTGGGATCTATTACCCTCCCACAGCCCACTCTCTCGGAGA
GTGGCGACCTCGTTTGTATAACTCAGTGCTGTCATTGTCTGTCCTCTGTA
AAGTCTCCTCAGTACCGTTCAGTAATCGCATTGTCTCTCCGCTCTTGCAG
GTACCGCACACTTCCCAACCTCAGGGAGTCTGGGCCGTTACCATGGCGAC
GATGGAAGCCATCATTGTGCTGGTGTTCTCCTCGGCTATGATCGTGAGTG
GAAAAGTCATTCACCGTGAGGGCTCCGGCGAGAACAAGGTAAACTACGAC
TGTGAGGACTGTGTGCGGATGGACAATGGCGGGCTCGACCCAAACAACGT
TCCCGTGCGGATAGACGCCGGCGGGCTGGACCCTAACGTTATCGTGCCCG
ACATGCGCGTGCCCGAGACGTGCGGCTCCTTCGCCATGTCTCACCTGTCC
GCAGACGTGCAGAACCTCCAGCGGGACCTGACCATGGTCCTGGCCAGGTG
GGAGAGGATGGAGAACACGCTGGACGAGGTGCAGGAGAACGTGGCGGACG
TGCAGCAGAGCGTGGTGGACCAGGGAGGCAAGATTAACACGCTGGAGGTG
CAGTTCTCCGAGGCGCTGTCACCAACGGGCATCAGCGAGGAACACCAGAG
GCACAACGGCCGCAAATACCTGCAGGACAAAGTCATGTCCCTGCAGAAGG
ACCGAGAAGAGTTCGTGGAGGTCATAGCTAAACAGAACACGCAGATCGCC
CATCTGGTGGACACGATACACGGGCTCAGGCAAAACGTCTTCCGTCTGAG
GGTCAAGCTCAAGAAAATGTCCGAAGAAGAAGACGAACACAAGGACGGGG
ATATGAGAGAACTTGAAACCAATTTGACCGTCATGGAGGAGAACGGGAAC
GGGTACGTGAACGGGGTTACGCCACATCCGCGGAAGTGAGGGGGAGAGAC
TGGGATAAATTCAGATGGATTCTTTCCTTGAGATACTGTTATTGATTGAC
ACAACCGCTACACCTGTGTTTTACTTCAGAGAGCTGACATAGAGTTGAGA
ACGCAATGCTGTCGTGCTTATGAAAGAACTGCACAGATATAAGCTAGAGG
GTTGGACTTGTTGCATGCACTATGCAAGACCCTTGACAAACGTCCAGCGG
CCGGTTCCGTGCTGTTGACAGGTTGGATTAACCTTTCCACTTTCACTTCC
ACCAGGCCGGACATCGCAGTTTATTTTTGGCAGGCAAATGTTGACCGTTC
TTTGTTTAGTTGCTGTTAAAAGCTACAAGTGGGACCACTTAGTAAGTATC
TGACTAAAGCACGTAGTGGCAGGCCGCCGGTCCCCCATGTGTCACTTCAG
ACGACAGGGTAAAGGAACGTAAAAGAAAAATAGTTGGTAAACACAGATGC
GCCATGTTGTGCCTTTGTTGAATTGTGGTACATTATAAGTGAGATTGTAT
GTATCTGCATAGTTCTTACCAATTTGTCACATCGTAGAGCCGTATTTGTA
TCTAGTCCACCCGGTGTCTAGCAACAGTCGACTTAATGACGTGTTTACTT
GGAAAACAAACGGTCGACCACACCGACAGAGTGCGAGTGTCAACCCTCTA
CTGTTACATCTGGACCTCGCGTCTTGACTCTAGATCAACTTTAAGTTCTT
ATGTCTTGGCCACATGTGCATTTGGCCTTGTACGTGTACGTTAGGTTGGA
ATAATTGTGTTCAGATCGTTGAATAGTTTATTATACATACTATATACTAG
ATTTTGAACTGTTGATATTTTTTTAGTTTCTATCAATTCTATGTCTGCTC
TGTGTAGTGACAAGTAACTGTAGTCGTCCTCACTGGGGAAGGCCAAGACG
TTTAAAAAAAGAAGATTAGTAGGTGAAGTCAGCGAAACGATCAAAGCTGT
GAATCTCACTGTCATGCCAAAATTGTTTTGTAATCGGTTTTCGTTCTGAT
CCTGTCAGAGCACAGTGGCACAGTCCTTGTATATTTTGTTCTCTATCCAA
ACAATTAAAAAGAGGATGATTTACACATTGTATGATGCGAGAAACGTTTT
GTTTGGTGATGTTTGAGAAATGTCAGAACCTCCGAGTCATCTGTCAAGTC
TGAGAAAGTTTCTAAACGTGACAACATGTGTCCCT Coding sequence (CDS) from alignment at Sc0000229:432369..440453- >BlTCONS00113602 ID=BlTCONS00113602|Name=BlTCONS00113602|organism=Branchiostoma lanceolatum|type=CDS|length=747bp|location=Sequence derived from alignment at Sc0000229:432369..440453- (Branchiostoma lanceolatum)
ATGGCGACGATGGAAGCCATCATTGTGCTGGTGTTCTCCTCGGCTATGAT
CGTGAGTGGAAAAGTCATTCACCGTGAGGGCTCCGGCGAGAACAAGGTAA
ACTACGACTGTGAGGACTGTGTGCGGATGGACAATGGCGGGCTCGACCCA
AACAACGTTCCCGTGCGGATAGACGCCGGCGGGCTGGACCCTAACGTTAT
CGTGCCCGACATGCGCGTGCCCGAGACGTGCGGCTCCTTCGCCATGTCTC
ACCTGTCCGCAGACGTGCAGAACCTCCAGCGGGACCTGACCATGGTCCTG
GCCAGGTGGGAGAGGATGGAGAACACGCTGGACGAGGTGCAGGAGAACGT
GGCGGACGTGCAGCAGAGCGTGGTGGACCAGGGAGGCAAGATTAACACGC
TGGAGGTGCAGTTCTCCGAGGCGCTGTCACCAACGGGCATCAGCGAGGAA
CACCAGAGGCACAACGGCCGCAAATACCTGCAGGACAAAGTCATGTCCCT
GCAGAAGGACCGAGAAGAGTTCGTGGAGGTCATAGCTAAACAGAACACGC
AGATCGCCCATCTGGTGGACACGATACACGGGCTCAGGCAAAACGTCTTC
CGTCTGAGGGTCAAGCTCAAGAAAATGTCCGAAGAAGAAGACGAACACAA
GGACGGGGATATGAGAGAACTTGAAACCAATTTGACCGTCATGGAGGAGA
ACGGGAACGGGTACGTGAACGGGGTTACGCCACATCCGCGGAAGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113602-exon-Sc0000229-1564993656:440285..440453 | BlTCONS00113602-exon-Sc0000229-1564993656:440285..440453 | Branchiostoma lanceolatum | exon |
| BlTCONS00113602-exon-Sc0000229-1564993656:432369..434353 | BlTCONS00113602-exon-Sc0000229-1564993656:432369..434353 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000229 | genome | Sc0000229:432369..440453 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055727 |
|
