BlTCONS00113599 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00113599
Unique NameBlTCONS00113599
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000229:432369..434768-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00113599 ID=BlTCONS00113599|Name=BlTCONS00113599|organism=Branchiostoma lanceolatum|type=mRNA|length=2400bp|location=Sequence derived from alignment at Sc0000229:432369..434768- (Branchiostoma lanceolatum)
GGGCAGCCTGGTGGGGGATGCGGGTGGTGAACTTGTCCGATATCTGGGTT CAGACAGACTGGTCCGTGTGGGATTTATTCCGCCTTGATGTGTTCTCTGC TGTTTGTTTGTCTTCTTAAGTTTTGAGCCGGACCTGTATTTGATGTTTAT AATTACTGTGAAATCTGTGCGATAATTCCGGTCCATCCGTGGTCGGACCC AATTACGACTCCAAGCGAGGCAGGCCTGACCCTCCGGTAGAACCACGTCA CTAGTCTCCGAAATAAAGCCAACATGTGGGATCTATTACCCTCCCACAGC CCACTCTCTCGGAGAGTGGCGACCTCGTTTGTATAACTCAGTGCTGTCAT TGTCTGTCCTCTGTAAAGTCTCCTCAGTACCGTTCAGTAATCGCATTGTC TCTCCGCTCTTGCAGGTACCGCACACTTCCCAACCTCAGGGAGTCTGGGC CGTTACCATGGCGACGATGGAAGCCATCATTGTGCTGGTGTTCTCCTCGG CTATGATCGTGAGTGGAAAAGTCATTCACCGTGAGGGCTCCGGCGAGAAC AAGGTAAACTACGACTGTGAGGACTGTGTGCGGATGGACAATGGCGGGCT CGACCCAAACAACGTTCCCGTGCGGATAGACGCCGGCGGGCTGGACCCTA ACGTTATCGTGCCCGACATGCGCGTGCCCGAGACGTGCGGCTCCTTCGCC ATGTCTCACCTGTCCGCAGACGTGCAGAACCTCCAGCGGGACCTGACCAT GGTCCTGGCCAGGTGGGAGAGGATGGAGAACACGCTGGACGAGGTGCAGG AGAACGTGGCGGACGTGCAGCAGAGCGTGGTGGACCAGGGAGGCAAGATT AACACGCTGGAGGTGCAGTTCTCCGAGGCGCTGTCACCAACGGGCATCAG CGAGGAACACCAGAGGCACAACGGCCGCAAATACCTGCAGGACAAAGTCA TGTCCCTGCAGAAGGACCGAGAAGAGTTCGTGGAGGTCATAGCTAAACAG AACACGCAGATCGCCCATCTGGTGGACACGATACACGGGCTCAGGCAAAA CGTCTTCCGTCTGAGGGTCAAGCTCAAGAAAATGTCCGAAGAAGAAGACG AACACAAGGACGGGGATATGAGAGAACTTGAAACCAATTTGACCGTCATG GAGGAGAACGGGAACGGGTACGTGAACGGGGTTACGCCACATCCGCGGAA GTGAGGGGGAGAGACTGGGATAAATTCAGATGGATTCTTTCCTTGAGATA CTGTTATTGATTGACACAACCGCTACACCTGTGTTTTACTTCAGAGAGCT GACATAGAGTTGAGAACGCAATGCTGTCGTGCTTATGAAAGAACTGCACA GATATAAGCTAGAGGGTTGGACTTGTTGCATGCACTATGCAAGACCCTTG ACAAACGTCCAGCGGCCGGTTCCGTGCTGTTGACAGGTTGGATTAACCTT TCCACTTTCACTTCCACCAGGCCGGACATCGCAGTTTATTTTTGGCAGGC AAATGTTGACCGTTCTTTGTTTAGTTGCTGTTAAAAGCTACAAGTGGGAC CACTTAGTAAGTATCTGACTAAAGCACGTAGTGGCAGGCCGCCGGTCCCC CATGTGTCACTTCAGACGACAGGGTAAAGGAACGTAAAAGAAAAATAGTT GGTAAACACAGATGCGCCATGTTGTGCCTTTGTTGAATTGTGGTACATTA TAAGTGAGATTGTATGTATCTGCATAGTTCTTACCAATTTGTCACATCGT AGAGCCGTATTTGTATCTAGTCCACCCGGTGTCTAGCAACAGTCGACTTA ATGACGTGTTTACTTGGAAAACAAACGGTCGACCACACCGACAGAGTGCG AGTGTCAACCCTCTACTGTTACATCTGGACCTCGCGTCTTGACTCTAGAT CAACTTTAAGTTCTTATGTCTTGGCCACATGTGCATTTGGCCTTGTACGT GTACGTTAGGTTGGAATAATTGTGTTCAGATCGTTGAATAGTTTATTATA CATACTATATACTAGATTTTGAACTGTTGATATTTTTTTAGTTTCTATCA ATTCTATGTCTGCTCTGTGTAGTGACAAGTAACTGTAGTCGTCCTCACTG GGGAAGGCCAAGACGTTTAAAAAAAGAAGATTAGTAGGTGAAGTCAGCGA AACGATCAAAGCTGTGAATCTCACTGTCATGCCAAAATTGTTTTGTAATC GGTTTTCGTTCTGATCCTGTCAGAGCACAGTGGCACAGTCCTTGTATATT TTGTTCTCTATCCAAACAATTAAAAAGAGGATGATTTACACATTGTATGA TGCGAGAAACGTTTTGTTTGGTGATGTTTGAGAAATGTCAGAACCTCCGA GTCATCTGTCAAGTCTGAGAAAGTTTCTAAACGTGACAACATGTGTCCCT

Coding sequence (CDS) from alignment at Sc0000229:432369..434768-

>BlTCONS00113599 ID=BlTCONS00113599|Name=BlTCONS00113599|organism=Branchiostoma lanceolatum|type=CDS|length=849bp|location=Sequence derived from alignment at Sc0000229:432369..434768- (Branchiostoma lanceolatum)
GGCAGCCTGGTGGGGGATGCGGGTGGTGAACTTGTCCGATATCTGGGTTC
AGACAGACTGGTACCGCACACTTCCCAACCTCAGGGAGTCTGGGCCGTTA
CCATGGCGACGATGGAAGCCATCATTGTGCTGGTGTTCTCCTCGGCTATG
ATCGTGAGTGGAAAAGTCATTCACCGTGAGGGCTCCGGCGAGAACAAGGT
AAACTACGACTGTGAGGACTGTGTGCGGATGGACAATGGCGGGCTCGACC
CAAACAACGTTCCCGTGCGGATAGACGCCGGCGGGCTGGACCCTAACGTT
ATCGTGCCCGACATGCGCGTGCCCGAGACGTGCGGCTCCTTCGCCATGTC
TCACCTGTCCGCAGACGTGCAGAACCTCCAGCGGGACCTGACCATGGTCC
TGGCCAGGTGGGAGAGGATGGAGAACACGCTGGACGAGGTGCAGGAGAAC
GTGGCGGACGTGCAGCAGAGCGTGGTGGACCAGGGAGGCAAGATTAACAC
GCTGGAGGTGCAGTTCTCCGAGGCGCTGTCACCAACGGGCATCAGCGAGG
AACACCAGAGGCACAACGGCCGCAAATACCTGCAGGACAAAGTCATGTCC
CTGCAGAAGGACCGAGAAGAGTTCGTGGAGGTCATAGCTAAACAGAACAC
GCAGATCGCCCATCTGGTGGACACGATACACGGGCTCAGGCAAAACGTCT
TCCGTCTGAGGGTCAAGCTCAAGAAAATGTCCGAAGAAGAAGACGAACAC
AAGGACGGGGATATGAGAGAACTTGAAACCAATTTGACCGTCATGGAGGA
GAACGGGAACGGGTACGTGAACGGGGTTACGCCACATCCGCGGAAGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113599-exon-Sc0000229-1564993656:434708..434768BlTCONS00113599-exon-Sc0000229-1564993656:434708..434768Branchiostoma lanceolatumexon
BlTCONS00113599-exon-Sc0000229-1564993656:432369..434353BlTCONS00113599-exon-Sc0000229-1564993656:432369..434353Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113599BlTCONS00113599-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000229genomeSc0000229:432369..434768 -
Properties
Property NameValue
GeneIDBlCUFF055727