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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000229:392784..401605- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113597 ID=BlTCONS00113597|Name=BlTCONS00113597|organism=Branchiostoma lanceolatum|type=mRNA|length=8822bp|location=Sequence derived from alignment at Sc0000229:392784..401605- (Branchiostoma lanceolatum)
AGAATCTTGACCCTGGGAGGGAACCCATCTCACTCCGGCTTCCCCTCCAT
CCGACACGGATGTTGTGTTCTGGGCGGGCGTGATAATTAGCCTACTGACA
CCCCATTGGTCGGCGTGCACGCCGCATAATCCGCCTCTCACTGTTATTGT
CAACAGCGATTGCAGTTCCTCTCAATGAAAAAGGCCCTCGGGCCCCTCCA
TCGCCTCTTTATATCCACAGAGGAAATGTAATATTGCCAGGTAGACCCCG
CGCGGCGCAGATCGGAGTCGTGTAGAGTACACTGTGCTGCGGACGAGCAG
GTCGCAGACAGGCAAGCCGAGACAAACAGACGACAGGGTAGCGGTCACGG
GCAGCTGCCGCCCAGGTCTACATAGATGTCTTTACTCAAAGCTTCAGTGT
CATCCGACTGCTACAGTCACCATCGTTGCGCCTTCAGTATACCGATGTTT
CTCGCCGGTAAAAACGACATTTTTGTTCTGTAGTCATTATCTCTTTTTCA
ACCCACCCTTGGCTAGTTTTTCTCTGAACGCGCTTAACCGTTCGCCCGAA
GGTCTGCTGTTTCATTGTGCAGACAGGTGCTTATTCCCAAGCCGCGGGGA
AAATGTGTGGAACCTCACATTTATATCATATACACTTACTGATGTTTCCC
TTTTTGTTTTTACTATTGATGTAGTGTATATTTACGTCTGCAATGTACGC
TTTATTTACCACGTCGACGCACAGTTAACATGCGAGAAGCCCGTATCTCT
GCTTCCCTTAGTCCTACATGACGCACATGCAACCCTGCATTTAATCCCCA
ACCTTTACGGGCTCCAGGCTTCTTCACGCGTACTCAATATGATGTCTTTA
TTCGTTATAACGCAGGACGCATTCCATGTTTGATATTTTCTTGTTTTTCC
CGTAGACCCGTCGTACGAGTGCCTGATGAGAGAGCGGCAGGCGGCGGGGG
GATGGAACGCTCAGGCAGGCTCCGCCTCCACAGAGAAAGGTAAAAATCTC
TCACAGTTTCCTCTTACTTTGCCTAGCAAGAATTCATATCATTGTCACGG
CCGTTAACACATCCATAGAAAATAGCGTTAGCTACAGTTGGACCTACAAA
AGGCCATGGTCGCGCTTTGTTGTTTGAGTCCGCTATTTGAAAATGTCCAC
CGTGCCTGCTACAGTTCTGAACCAATTCTGATAGTTCTATCGCACAGGTA
TCGCGAGCTTATACCGGTAAATGTGTTAGCTCTACGGTTTCTTTATTTAG
AGTGTTGTGTGTTACATTTCACTGTTTTGTCGTGGGATGTCCGATTTTCG
AATACACCCTTTCGCTCAACCCTTAGTCCCCGATATTTGCCAGTACGGTG
AACAGGTAGGCAGGGTGAACAACTGCCCCGAATGACCTCCAATTTAGTAT
CTGTATTTTGTGGTGGCGGCAGGACCTTCTGTACAGCCCGTGAAGCGCGT
GTTGGCTGATTCTCCCCGGCCCGTGACCCGGGAAGTCACACGTATTTCCT
GGCCGTCAGCTATCTCTCCAGCCCGCCGTAAGGAGCGCCAATGAGTTCCC
AATATCCTGTAGTGGCGCTTTTGAGACTGCTGTAATTTTACGGTAGGGCT
AGATGTAACTAACCTCCTCCCAAGTTAATTCTACCCGTTCAGAAACGGTC
GCCATTTACGGTCGGTATTTTCTACGCGGCAGTCCTTGATAGAGAGGGGA
GACGGAGACAAAACGCCCTGAAAGGCGACGATTTGGCGGCGGAACTAAGG
GTCAGCGGTGGAATTTCCGACTGTCTTCGGGACTCGGTCATGTTCAAGTG
GCCCCACATGAAAGGTAGACAACGGCCCCGTGCCGTTCTTGGCCGCATCA
AAGCCGAATGTTTGTCTCAGCTTTCCGTGCACATCCCCTGAACACTTTAT
CTTCCCGGGCAGTGAATACTGCTCGTAGCTCTCCGCCTTATCTCAGTCCA
CACGAGCAATTATCGCCCGAGCACAGAGCAGTCGTGCCTGTCGTTCATAA
ACCGCCTTCAATAGAAGAACGGCTTATCTCTCGCGCGCAGGGAACAATAG
GTGCCGCGCTTTCTCACCGCCGCGAGTCGCAACCGCTATATGACATTTTC
CTACCCTTATCTGTCAGAGAGAATTTTCCACATTAACGTTTCCCTTCTTT
TCTTTTTCCTCTTATTTATCCTCCCAGACTTCACAGCGCCGTCTATCCAC
TCCGTCACCAAGCCCGTAGTCGATGTAGCCAGTGTGCATGCTCAGACAAG
GAACATGCAAGGTAACACACGCACACACGCACACGCGTCTTTTTCTNCGC
ACACACTCACACGCGTCTTTTTCTATCCTCCTCTGCTCTCATCTTTGATC
AAATTAGTAGATGTCGGACGTACAGGAAGGTCTCTCCGCTTGAGCAGGAT
GTCGGGGCTGATGTATGCTCTTGAGGAGGGCAAAGAACACGGCCTTTCTC
TCAACGCCCATTTCCTGACAGAAGATAAAGGAATCCGGTCCGTCCGACCC
CGATAAATCTATAGCTGTATCTTGAAGCAGCACGATGGGTTAATGTTGTA
GACTGATAGCAGGGGAAGGGCGACATGTTTGGACATCTGTGATGTGCTGT
GGGGACGTTTGGCTGTGCGTGCGACTTGGAACAACTTCAACCAACAAAAT
TACAATCATCAAATGTCTTTAATGACCCCTTTCTGTGGATTAATCGTTGC
TACATTAACAAGAAATGGGGACGGAGAGAGAAACCGATAGCTAGACTATA
TTTGATTAGATTGTGTGTTTTCGGAAATATTCGTCGATTTTTGTTCGTTT
AAAGCCAAGTATTATTACAGAGGAAGCAGTATTCCCGTTTTAACACAGAT
GGGATAGGTTTCTACACAAAAGTATCGTTTCAAGTACATTTTTCGCATGT
TTTCGTTTGCAAACAGTAGCAAATCACATGCCAAAGAAGGACGGGCTTGA
AACGGCTCATCTTTCCTCACAAATCGAAGTCGGCAAAAAGGCGCAAACAC
AACGACATAAGCATCTCATATTTGGTGATATTTTTGGCACTACTACACAC
TTGTGTTTATCAACATTCGCCTCTCCTTGACGTCGGTTCCTCTATGATGA
GCACAGCATGTTTATCGTGATGATGGGAACATCCTTTTCCCCAGCTTTAC
ATAACGGTGCTTACAATCAGACCGGACCGAGATCAGTAGTTTCTCATTAT
AAGGCTACCTCTGTTCAAATTAAATCTTTCCTTATTATTACCCGCAGAGA
GTGTTTTCATCCTTTTTTGTACATGGGAATAGGTGCAAGCCGAATCTCCT
CCTGTATACTCCTGTTTCGTAACGTTCTACCCTTCCCGTCCCTTAATTCG
TGTTTCCTCCACATGTTACGTAAATTGGAACGGTCTAGGGTTTCCGCGGG
CAGCTACTATATTGGTTGTTTTGTGTTGTCATGGTGGATGACTGCTGTAG
TTTCTATGGCCCTAAGCACAAGGAACATCTCGAATGCAAACTAAATATAT
CCACCTCAAAGGCAGACATCAAAATGATACAAAGGGCTATGAACTGTGTG
TGTAATTGGCTTGCCGGGGTTTCTTGAAGCTATTCTTAGCGATGCAGGAC
GTACATACATTCATGATTTAAAGGTAGCGGATGCACAAGTGATGTGGTGA
ACATGAACATGTTTGTTTGTTTCTCGCCCCGTGCAGTGACAGACCCGTAC
CAGCTGTTTGCCCCCATCACCAGTCGGCTGTGCAGCCAAGGTACGTACAG
TCCTGCAGCCTACAGTAATCATATCAACAGACATGTAGCCATGGTACCCA
AACCATCTGTCCTGGAGAAGGGACAGGTACGTCAAACGCTAATGAGGGAG
ACAGCTTGAGAGCATAATAAACAAAATGGATAGTCATGGTTCCGTATTAC
AGCCATTGCATCTTCATGACATTCGCAAATGAGCGGCCAACAAAATCCAT
GAAACGAATAATCTTGTCAGGGTGTAGGAAAATTGCCATAGAGACTCTAA
AATAGAGGATACTATGTGTACTTAGCATTCAAATTCTATCTGAGTTGTAA
AAGTGTTTAAGGGTAAAAACGGGTAGATTTAAGTGGTAAAGGTCGATGGA
TAATGTTAGTTAACAGTCCTCTGTGGGGTTCGGACGGTGGTAACATCGGT
CCCGGAGACTTACGAAACCTTTGGCGGCTAAAAACTATATGATCAGAATG
TGGTTAAAATCAGTGAGTTAGACCGGGCCCACCCATGCTTTGCAGCATTA
TGCGTCATTCAAACTCAGGCACAGATACGGGGATGTTGCCTTTTAGTTAT
TATACAAGTTGTGCGACAAAAGTTCTGTTTTGTGATGTAAGGTGATATAA
TGTGAAATAAGGAAGTGTGGACACCAATACAGCCAGAGAATAAAAAAGGT
TAGCAGTCTACTCTTTAGTCAGTAACTTGACCATAACGCCACTCGAACGT
TCTGAGAAGTGAATACCAGTGTGGCCATTTTTCTCTCCACCATGACTGGG
TCATTCCTACGTTATTTGCATGGGCATGAGTGATTATGCGTCGTTTTTCA
CATGGTAGATTTGATGCTGTTTCTACATTCATGATGACACTGCTTTGGAG
AATGCCTAGACCTTCCTTTATACGGAAACTTTGTTTGATGTTTATTTTCA
TGAATTGGTGCATATGTTTGAATTGATCCCACCCGCTGTGATCACGTCCA
GTTCAAACTGTTTTGTTACCAGTAACAGTCCCTAAACACCCCTGACTGTG
CCTGAGGCAGAATGATTTTTGAATGTAATTGTGTCTGAAGATGGGCGGAT
CAAAGCTATATAGACCCTGTCAATCAAATAGTTGATAGAGAAAGGAACTT
GATTTTGAACGCTCGTGTTGATCACATTTTCGATCATTTGGTTTGATATT
TTGATTCCCCCAACAGAACAATGGATGAATATTATTGTATTTTTTTCACA
AAGTCATAACAACTTGGACACACGTACTACGATTTTACCTGGTCACTTCT
GACACCCTGACTTGTTATTTCTCTGAAAAATGCTGAACTTTTTTTTCTCT
ATCGGATATATGGATTTCGAGTGTTCTGGGGTAAAACAGCCAAAGAAAGG
AATCGCCACATTCGGATTGACAGTTAAACCATTTCTACCCATTTGCTTGG
GTAACTGTTACCTTGTGTATCTTTTTACCTGAATGTTTAACCTTCATCGA
AGTAACTGTGCGATAGCTAGTTTAAAACACACAAAAGGAAATACGGGAAA
ACGCGGGAGAAGGAAGTCATTAACCATATATGTTATTATCCCCCCATACC
GTGACTTCCGGTCCGGTGTATTAACTATAATAAGGAATACCCTGTTTTAT
GAAATAAACGTAGGAGAAATCATGTTTGTCTGCCGGATATTGATATAAAC
GTATTTGTCCAGTCTGTGAGTATTGGAGGGNATTTGTCCAGCCTGTACGT
GTTGGAGGGTTCGCACTAGTCTGCGTGACTAGAGGGTTTGTGGGCTGTGG
AGTCACTGGAAATGGGTGTAAGAAATGCATGGATATTGATGATATGAAGT
GAGATAAACATTCTTTAACTAATTAAATGTTAGAAACAAATCAAGTGGCT
AGCAAACTGGTTATCATCGCACAAGGCAATATCTATTAATAGTAACGATA
CAAACGGTAACATGGGTCAATTTGTGTGCGCTGTCCCTGGTGCTGAATGA
CTATCCCTGTGTATTGCGACAGAAAACAACAACTGTAATAATTACTACGC
CTTTGAATATTAGACATTGAATAGACTTCTGCGCTGTAGGAAAACTCTTT
ATTCTTTAGTTTTAGATGCCATATGGTCTGGCCTTGGTGCTGAAAGCACG
GTGTTGTGTTTCAGAGCCCTCCAATAACAAGAAACTACAAAAACATCATT
ATTACACCTGCCAGAAGGAAACCTCAATGCATGTCTTCGCAAGGTAGTAC
CATACTAAGAAAACGTTTTTGGATGAAAGAGGTAGAGACATCTCAATTCT
AGTGTTCTCGGGTTTTTCAACGTAGATACTGTGATCTTATCATAGTGTGG
TTCTTCCGAAAAACATAAACAACAACAACCAAATTTCAGGTCACAGATGT
TTTATTAGCTAGTCTAGTACATTGTAGTTCCATTTGTGAGAACAAATGCC
CTAACATATACTATAGTGACCCGGATATTAATTGCAATATCTTTGTCATC
GTGATAAACCAGTCAGCGCGTTGAAAGGTTTAAAGGTACACCACCTCATT
TGTTCGATCAATTGAGAAATGTTCAATCTATTTACATATCTATCAGGGAA
GGTAGATCTTTCAAACACTGTTTCCACTAACATTGGAAGTCATATTGACT
GTAACAGCCTTTGAAATGCGTGTCTGTGTGCTCCACGGCACCTTCGACAA
GAAAGCTTGTCCTTGCATTTATATAATTGATTTGCTGATTTTTCATCCAG
TACTTCCTGCGAAGACCGGAGGACTACAAGTGCCTTCTGATTGAAGCATG
TTTTTGAATTCCCCTATTTAATACCAAGACTCTCACTTTGGGACCTTTAG
TCATTTTTTTTCCTGAGAGCGGGGAGGGCAAGGGCTCTTATCGCAAACGG
GGGAAGGTTCTTAACACAACACACAAGCCGATTCAGCATTTCCAAACAGC
GCTAGCGTTAGGCGTGCTCTTGAATAAACGCCAGCCGTGTGTTCTTCTCT
CTACGTCAGTGATTCAATTATTCATCAGTCGCCTGTATGGTGATTTTCGG
CTCTGCTGGGCGCCTCAGTTGCTAGCTTTTAGGCCCCGAATTCGCCACTT
CATGCAGGGCCTCGTCGCTGAGCGACGGACCTATTGTCCTTGTTAGGAAA
TAGGTTCTACCTACAGAGCGGATAGGAATATCCCAACATCGTTATGCGTT
TCCTCGCAAGTCACGAGTCAATTACCGGGTATTTATTAATGTGTCTATTA
CCATTATTGGGACTGATTGTTACCGGCGGTGCTGTGCGTCATCGCCGCGC
GTTGCGGATGAAACAGAAAGCCGTCTCCACGTGAACTGGTGGAACGTGCG
TCCTTGTGAGCCTCGCATCCTGTCCCCTTCCTCTCATCACGAGGCTAAGA
CACAATGAACTCATTCTCACTCATGGCTGATTCTGAGAAAAACGTATTGA
CTGTGAAAACAGTTAAATAGAATTCTATTAGCGTCTATTAGCATGTCGAT
TTAACAGCGGGATCAACCCCTTTATTTTCATATCGTATTGTAGCAGCGGG
TAGTACATGTATATTTTGATTGCTTTTGATGTCATTAACCAATAGTTAAC
TTCCCTTGTAGCTGTCCTGTAACTATGGTTACAATGTTTTTCATAGCAAC
CGTACATAACATCATTACTGGGCAAGGTTGTACAAGAAGGTCACGTCAAA
AGTGACGAACATTTTTAGGTACGAATAAGTACGGTTCAGTTTTTCCATAT
ACTATCTGTAAGTGTCACTTTAGAATTTAGCTAATTCTATTCATTCAAAT
AGGATAAACACAGGAAGTAAGATCTCAGTGAGTAAACAATATCCAGTGTA
ACGGACTCCTCTTCTGCCAGGTTCAGGCCAGATCCAGCTGTGGCAGTTCC
TCCTGGAGCTCTTGTCTGACGCCGCCAACGCCAACTGCATCACCTGGGAG
GGAACCAACGGCGAGTTCAAGATGACGGACCCTGACGAGGTGGCGCGGCG
CTGGGGGGAGCGCAAGAGCAAACCCAACATGAACTACGACAAGCTCAGCC
GCGCACTGCGCTACTACTACGACAAGAACATCATGACCAAAGTGCACGGC
AAGAGGTACGCCTACAAGTTTGACTTCCACGGACTGGCCCAGGCCGCCCA
GGCAGCGGCAGGCGGTATCGCCTCCCCGTACAAGTTCCACACAGAACTGT
CCTACCTGCCCGGGTACCCGCACGGGCCCAAACTGAACTTCATGGGAGGA
CATATCCCGTCGTCCTCTGCAAACCTGTTCGCGTCGCCATCTTCCTACTG
GTCCTCCACAGCAGCGGCCAACATCTACCAGAACCATGGCATGACGTCAC
ATCCGGGGCACTTAAGTTCTTATTACCCTTGAAACATTCGCTTTCTTTTC
TATAATCTCCCCAGAAATGAGAACCACGTGATAACCACGATCTCACGAGA
TCTATAGTCCAAACATAGTGACGATAAAAGGACCTTTCCGAACGGTTCAG
AGAAACACTGATTGATAAAACAACATAGTGACCCACTACGGGCTGATCAT
GATTGTTCTCATCCAGATGGTATAAAAGACATTGCGCATGCCCACGCGCA
TGGCATCTAGGGTGTATATTGGTGAGGCTCATCGGCCATGTTTGCCGTGG
AAGACATTTTGACAAAGTCAAAGATTGACTGTTTACTTGGAAATCAGAGA
AGTGTAACTTCAGAAGTTCAGAAATTTTATTCTTTCAATTTGTGGGACCA
AGTTGGAAAAAGATCGTGCATGAGGATGTAGTCCGTGTAAATCAAAGCTT
TCAGGCTACAACAGACCAATGTTTATTTCTGTTGTTTAAGTGTGCATCTT
TTTCCTTCTCTAAACTGTACACACCAAGTCTCTCAAGATAGATTTATGTT
GATAAGATGCATAAGATCAGTTTCTTCAACTACATAATAGCGTAACTTAA
GTAGAACACAACTTGGAGTAGAATACATTGTAAAAAATGTATGTCTGTAA
GTATGGATATCAATAGAAAAATAATGTTTACCAAGTCTATACTATTGCAA
CATGTCCTTGTCAATGATTTTCCTCTTCTTTTGACTCGTCATTATACACA
TGTTGAACACTAAACGTTGTGG Coding sequence (CDS) from alignment at Sc0000229:392784..401605- >BlTCONS00113597 ID=BlTCONS00113597|Name=BlTCONS00113597|organism=Branchiostoma lanceolatum|type=CDS|length=816bp|location=Sequence derived from alignment at Sc0000229:392784..401605- (Branchiostoma lanceolatum)
ATGTCTTTACTCAAAGCTTCAGTGTCATCCGACTGCTACAGTCACCATCG
TTGCGCCTTCAGTATACCGATGTTTCTCGCCGACCCGTCGTACGAGTGCC
TGATGAGAGAGCGGCAGGCGGCGGGGGGATGGAACGCTCAGGCAGGCTCC
GCCTCCACAGAGAAAGACTTCACAGCGCCGTCTATCCACTCCGTCACCAA
GCCCGTAGTCGATGTAGCCAGTGTGCATGCTCAGACAAGGAACATGCAAG
TGACAGACCCGTACCAGCTGTTTGCCCCCATCACCAGTCGGCTGTGCAGC
CAAGGTTCAGGCCAGATCCAGCTGTGGCAGTTCCTCCTGGAGCTCTTGTC
TGACGCCGCCAACGCCAACTGCATCACCTGGGAGGGAACCAACGGCGAGT
TCAAGATGACGGACCCTGACGAGGTGGCGCGGCGCTGGGGGGAGCGCAAG
AGCAAACCCAACATGAACTACGACAAGCTCAGCCGCGCACTGCGCTACTA
CTACGACAAGAACATCATGACCAAAGTGCACGGCAAGAGGTACGCCTACA
AGTTTGACTTCCACGGACTGGCCCAGGCCGCCCAGGCAGCGGCAGGCGGT
ATCGCCTCCCCGTACAAGTTCCACACAGAACTGTCCTACCTGCCCGGGTA
CCCGCACGGGCCCAAACTGAACTTCATGGGAGGACATATCCCGTCGTCCT
CTGCAAACCTGTTCGCGTCGCCATCTTCCTACTGGTCCTCCACAGCAGCG
GCCAACATCTACCAGAACCATGGCATGACGTCACATCCGGGGCACTTAAG
TTCTTATTACCCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113597-exon-Sc0000229-1564993656:401149..401605 | BlTCONS00113597-exon-Sc0000229-1564993656:401149..401605 | Branchiostoma lanceolatum | exon |
| BlTCONS00113597-exon-Sc0000229-1564993656:400617..400700 | BlTCONS00113597-exon-Sc0000229-1564993656:400617..400700 | Branchiostoma lanceolatum | exon |
| BlTCONS00113597-exon-Sc0000229-1564993656:399345..399428 | BlTCONS00113597-exon-Sc0000229-1564993656:399345..399428 | Branchiostoma lanceolatum | exon |
| BlTCONS00113597-exon-Sc0000229-1564993656:397866..397919 | BlTCONS00113597-exon-Sc0000229-1564993656:397866..397919 | Branchiostoma lanceolatum | exon |
| BlTCONS00113597-exon-Sc0000229-1564993656:392784..394035 | BlTCONS00113597-exon-Sc0000229-1564993656:392784..394035 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000229 | genome | Sc0000229:392784..401605 - |
Properties
| Property Name | Value |
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| GeneID | BlCUFF055725 |
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