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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000229:392784..401587- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113596 ID=BlTCONS00113596|Name=BlTCONS00113596|organism=Branchiostoma lanceolatum|type=mRNA|length=8804bp|location=Sequence derived from alignment at Sc0000229:392784..401587- (Branchiostoma lanceolatum)
GGGAACCCATCTCACTCCGGCTTCCCCTCCATCCGACACGGATGTTGTGT
TCTGGGCGGGCGTGATAATTAGCCTACTGACACCCCATTGGTCGGCGTGC
ACGCCGCATAATCCGCCTCTCACTGTTATTGTCAACAGCGATTGCAGTTC
CTCTCAATGAAAAAGGCCCTCGGGCCCCTCCATCGCCTCTTTATATCCAC
AGAGGAAATGTAATATTGCCAGGTAGACCCCGCGCGGCGCAGATCGGAGT
CGTGTAGAGTACACTGTGCTGCGGACGAGCAGGTCGCAGACAGGCAAGCC
GAGACAAACAGACGACAGGGTAGCGGTCACGGGCAGCTGCCGCCCAGGTC
TACATAGATGTCTTTACTCAAAGCTTCAGTGTCATCCGACTGCTACAGTC
ACCATCGTTGCGCCTTCAGTATACCGATGTTTCTCGCCGGTAAAAACGAC
ATTTTTGTTCTGTAGTCATTATCTCTTTTTCAACCCACCCTTGGCTAGTT
TTTCTCTGAACGCGCTTAACCGTTCGCCCGAAGGTCTGCTGTTTCATTGT
GCAGACAGGTGCTTATTCCCAAGCCGCGGGGAAAATGTGTGGAACCTCAC
ATTTATATCATATACACTTACTGATGTTTCCCTTTTTGTTTTTACTATTG
ATGTAGTGTATATTTACGTCTGCAATGTACGCTTTATTTACCACGTCGAC
GCACAGTTAACATGCGAGAAGCCCGTATCTCTGCTTCCCTTAGTCCTACA
TGACGCACATGCAACCCTGCATTTAATCCCCAACCTTTACGGGCTCCAGG
CTTCTTCACGCGTACTCAATATGATGTCTTTATTCGTTATAACGCAGGAC
GCATTCCATGTTTGATATTTTCTTGTTTTTCCCGTAGACCCGTCGTACGA
GTGCCTGATGAGAGAGCGGCAGGCGGCGGGGGGATGGAACGCTCAGGCAG
GCTCCGCCTCCACAGAGAAAGGTAAAAATCTCTCACAGTTTCCTCTTACT
TTGCCTAGCAAGAATTCATATCATTGTCACGGCCGTTAACACATCCATAG
AAAATAGCGTTAGCTACAGTTGGACCTACAAAAGGCCATGGTCGCGCTTT
GTTGTTTGAGTCCGCTATTTGAAAATGTCCACCGTGCCTGCTACAGTTCT
GAACCAATTCTGATAGTTCTATCGCACAGGTATCGCGAGCTTATACCGGT
AAATGTGTTAGCTCTACGGTTTCTTTATTTAGAGTGTTGTGTGTTACATT
TCACTGTTTTGTCGTGGGATGTCCGATTTTCGAATACACCCTTTCGCTCA
ACCCTTAGTCCCCGATATTTGCCAGTACGGTGAACAGGTAGGCAGGGTGA
ACAACTGCCCCGAATGACCTCCAATTTAGTATCTGTATTTTGTGGTGGCG
GCAGGACCTTCTGTACAGCCCGTGAAGCGCGTGTTGGCTGATTCTCCCCG
GCCCGTGACCCGGGAAGTCACACGTATTTCCTGGCCGTCAGCTATCTCTC
CAGCCCGCCGTAAGGAGCGCCAATGAGTTCCCAATATCCTGTAGTGGCGC
TTTTGAGACTGCTGTAATTTTACGGTAGGGCTAGATGTAACTAACCTCCT
CCCAAGTTAATTCTACCCGTTCAGAAACGGTCGCCATTTACGGTCGGTAT
TTTCTACGCGGCAGTCCTTGATAGAGAGGGGAGACGGAGACAAAACGCCC
TGAAAGGCGACGATTTGGCGGCGGAACTAAGGGTCAGCGGTGGAATTTCC
GACTGTCTTCGGGACTCGGTCATGTTCAAGTGGCCCCACATGAAAGGTAG
ACAACGGCCCCGTGCCGTTCTTGGCCGCATCAAAGCCGAATGTTTGTCTC
AGCTTTCCGTGCACATCCCCTGAACACTTTATCTTCCCGGGCAGTGAATA
CTGCTCGTAGCTCTCCGCCTTATCTCAGTCCACACGAGCAATTATCGCCC
GAGCACAGAGCAGTCGTGCCTGTCGTTCATAAACCGCCTTCAATAGAAGA
ACGGCTTATCTCTCGCGCGCAGGGAACAATAGGTGCCGCGCTTTCTCACC
GCCGCGAGTCGCAACCGCTATATGACATTTTCCTACCCTTATCTGTCAGA
GAGAATTTTCCACATTAACGTTTCCCTTCTTTTCTTTTTCCTCTTATTTA
TCCTCCCAGACTTCACAGCGCCGTCTATCCACTCCGTCACCAAGCCCGTA
GTCGATGTAGCCAGTGTGCATGCTCAGACAAGGAACATGCAAGGTAACAC
ACGCACACACGCACACGCGTCTTTTTCTNCGCACACACTCACACGCGTCT
TTTTCTATCCTCCTCTGCTCTCATCTTTGATCAAATTAGTAGATGTCGGA
CGTACAGGAAGGTCTCTCCGCTTGAGCAGGATGTCGGGGCTGATGTATGC
TCTTGAGGAGGGCAAAGAACACGGCCTTTCTCTCAACGCCCATTTCCTGA
CAGAAGATAAAGGAATCCGGTCCGTCCGACCCCGATAAATCTATAGCTGT
ATCTTGAAGCAGCACGATGGGTTAATGTTGTAGACTGATAGCAGGGGAAG
GGCGACATGTTTGGACATCTGTGATGTGCTGTGGGGACGTTTGGCTGTGC
GTGCGACTTGGAACAACTTCAACCAACAAAATTACAATCATCAAATGTCT
TTAATGACCCCTTTCTGTGGATTAATCGTTGCTACATTAACAAGAAATGG
GGACGGAGAGAGAAACCGATAGCTAGACTATATTTGATTAGATTGTGTGT
TTTCGGAAATATTCGTCGATTTTTGTTCGTTTAAAGCCAAGTATTATTAC
AGAGGAAGCAGTATTCCCGTTTTAACACAGATGGGATAGGTTTCTACACA
AAAGTATCGTTTCAAGTACATTTTTCGCATGTTTTCGTTTGCAAACAGTA
GCAAATCACATGCCAAAGAAGGACGGGCTTGAAACGGCTCATCTTTCCTC
ACAAATCGAAGTCGGCAAAAAGGCGCAAACACAACGACATAAGCATCTCA
TATTTGGTGATATTTTTGGCACTACTACACACTTGTGTTTATCAACATTC
GCCTCTCCTTGACGTCGGTTCCTCTATGATGAGCACAGCATGTTTATCGT
GATGATGGGAACATCCTTTTCCCCAGCTTTACATAACGGTGCTTACAATC
AGACCGGACCGAGATCAGTAGTTTCTCATTATAAGGCTACCTCTGTTCAA
ATTAAATCTTTCCTTATTATTACCCGCAGAGAGTGTTTTCATCCTTTTTT
GTACATGGGAATAGGTGCAAGCCGAATCTCCTCCTGTATACTCCTGTTTC
GTAACGTTCTACCCTTCCCGTCCCTTAATTCGTGTTTCCTCCACATGTTA
CGTAAATTGGAACGGTCTAGGGTTTCCGCGGGCAGCTACTATATTGGTTG
TTTTGTGTTGTCATGGTGGATGACTGCTGTAGTTTCTATGGCCCTAAGCA
CAAGGAACATCTCGAATGCAAACTAAATATATCCACCTCAAAGGCAGACA
TCAAAATGATACAAAGGGCTATGAACTGTGTGTGTAATTGGCTTGCCGGG
GTTTCTTGAAGCTATTCTTAGCGATGCAGGACGTACATACATTCATGATT
TAAAGGTAGCGGATGCACAAGTGATGTGGTGAACATGAACATGTTTGTTT
GTTTCTCGCCCCGTGCAGTGACAGACCCGTACCAGCTGTTTGCCCCCATC
ACCAGTCGGCTGTGCAGCCAAGGTACGTACAGTCCTGCAGCCTACAGTAA
TCATATCAACAGACATGTAGCCATGGTACCCAAACCATCTGTCCTGGAGA
AGGGACAGGTACGTCAAACGCTAATGAGGGAGACAGCTTGAGAGCATAAT
AAACAAAATGGATAGTCATGGTTCCGTATTACAGCCATTGCATCTTCATG
ACATTCGCAAATGAGCGGCCAACAAAATCCATGAAACGAATAATCTTGTC
AGGGTGTAGGAAAATTGCCATAGAGACTCTAAAATAGAGGATACTATGTG
TACTTAGCATTCAAATTCTATCTGAGTTGTAAAAGTGTTTAAGGGTAAAA
ACGGGTAGATTTAAGTGGTAAAGGTCGATGGATAATGTTAGTTAACAGTC
CTCTGTGGGGTTCGGACGGTGGTAACATCGGTCCCGGAGACTTACGAAAC
CTTTGGCGGCTAAAAACTATATGATCAGAATGTGGTTAAAATCAGTGAGT
TAGACCGGGCCCACCCATGCTTTGCAGCATTATGCGTCATTCAAACTCAG
GCACAGATACGGGGATGTTGCCTTTTAGTTATTATACAAGTTGTGCGACA
AAAGTTCTGTTTTGTGATGTAAGGTGATATAATGTGAAATAAGGAAGTGT
GGACACCAATACAGCCAGAGAATAAAAAAGGTTAGCAGTCTACTCTTTAG
TCAGTAACTTGACCATAACGCCACTCGAACGTTCTGAGAAGTGAATACCA
GTGTGGCCATTTTTCTCTCCACCATGACTGGGTCATTCCTACGTTATTTG
CATGGGCATGAGTGATTATGCGTCGTTTTTCACATGGTAGATTTGATGCT
GTTTCTACATTCATGATGACACTGCTTTGGAGAATGCCTAGACCTTCCTT
TATACGGAAACTTTGTTTGATGTTTATTTTCATGAATTGGTGCATATGTT
TGAATTGATCCCACCCGCTGTGATCACGTCCAGTTCAAACTGTTTTGTTA
CCAGTAACAGTCCCTAAACACCCCTGACTGTGCCTGAGGCAGAATGATTT
TTGAATGTAATTGTGTCTGAAGATGGGCGGATCAAAGCTATATAGACCCT
GTCAATCAAATAGTTGATAGAGAAAGGAACTTGATTTTGAACGCTCGTGT
TGATCACATTTTCGATCATTTGGTTTGATATTTTGATTCCCCCAACAGAA
CAATGGATGAATATTATTGTATTTTTTTCACAAAGTCATAACAACTTGGA
CACACGTACTACGATTTTACCTGGTCACTTCTGACACCCTGACTTGTTAT
TTCTCTGAAAAATGCTGAACTTTTTTTTCTCTATCGGATATATGGATTTC
GAGTGTTCTGGGGTAAAACAGCCAAAGAAAGGAATCGCCACATTCGGATT
GACAGTTAAACCATTTCTACCCATTTGCTTGGGTAACTGTTACCTTGTGT
ATCTTTTTACCTGAATGTTTAACCTTCATCGAAGTAACTGTGCGATAGCT
AGTTTAAAACACACAAAAGGAAATACGGGAAAACGCGGGAGAAGGAAGTC
ATTAACCATATATGTTATTATCCCCCCATACCGTGACTTCCGGTCCGGTG
TATTAACTATAATAAGGAATACCCTGTTTTATGAAATAAACGTAGGAGAA
ATCATGTTTGTCTGCCGGATATTGATATAAACGTATTTGTCCAGTCTGTG
AGTATTGGAGGGNATTTGTCCAGCCTGTACGTGTTGGAGGGTTCGCACTA
GTCTGCGTGACTAGAGGGTTTGTGGGCTGTGGAGTCACTGGAAATGGGTG
TAAGAAATGCATGGATATTGATGATATGAAGTGAGATAAACATTCTTTAA
CTAATTAAATGTTAGAAACAAATCAAGTGGCTAGCAAACTGGTTATCATC
GCACAAGGCAATATCTATTAATAGTAACGATACAAACGGTAACATGGGTC
AATTTGTGTGCGCTGTCCCTGGTGCTGAATGACTATCCCTGTGTATTGCG
ACAGAAAACAACAACTGTAATAATTACTACGCCTTTGAATATTAGACATT
GAATAGACTTCTGCGCTGTAGGAAAACTCTTTATTCTTTAGTTTTAGATG
CCATATGGTCTGGCCTTGGTGCTGAAAGCACGGTGTTGTGTTTCAGAGCC
CTCCAATAACAAGAAACTACAAAAACATCATTATTACACCTGCCAGAAGG
AAACCTCAATGCATGTCTTCGCAAGGTAGTACCATACTAAGAAAACGTTT
TTGGATGAAAGAGGTAGAGACATCTCAATTCTAGTGTTCTCGGGTTTTTC
AACGTAGATACTGTGATCTTATCATAGTGTGGTTCTTCCGAAAAACATAA
ACAACAACAACCAAATTTCAGGTCACAGATGTTTTATTAGCTAGTCTAGT
ACATTGTAGTTCCATTTGTGAGAACAAATGCCCTAACATATACTATAGTG
ACCCGGATATTAATTGCAATATCTTTGTCATCGTGATAAACCAGTCAGCG
CGTTGAAAGGTTTAAAGGTACACCACCTCATTTGTTCGATCAATTGAGAA
ATGTTCAATCTATTTACATATCTATCAGGGAAGGTAGATCTTTCAAACAC
TGTTTCCACTAACATTGGAAGTCATATTGACTGTAACAGCCTTTGAAATG
CGTGTCTGTGTGCTCCACGGCACCTTCGACAAGAAAGCTTGTCCTTGCAT
TTATATAATTGATTTGCTGATTTTTCATCCAGTACTTCCTGCGAAGACCG
GAGGACTACAAGTGCCTTCTGATTGAAGCATGTTTTTGAATTCCCCTATT
TAATACCAAGACTCTCACTTTGGGACCTTTAGTCATTTTTTTTCCTGAGA
GCGGGGAGGGCAAGGGCTCTTATCGCAAACGGGGGAAGGTTCTTAACACA
ACACACAAGCCGATTCAGCATTTCCAAACAGCGCTAGCGTTAGGCGTGCT
CTTGAATAAACGCCAGCCGTGTGTTCTTCTCTCTACGTCAGTGATTCAAT
TATTCATCAGTCGCCTGTATGGTGATTTTCGGCTCTGCTGGGCGCCTCAG
TTGCTAGCTTTTAGGCCCCGAATTCGCCACTTCATGCAGGGCCTCGTCGC
TGAGCGACGGACCTATTGTCCTTGTTAGGAAATAGGTTCTACCTACAGAG
CGGATAGGAATATCCCAACATCGTTATGCGTTTCCTCGCAAGTCACGAGT
CAATTACCGGGTATTTATTAATGTGTCTATTACCATTATTGGGACTGATT
GTTACCGGCGGTGCTGTGCGTCATCGCCGCGCGTTGCGGATGAAACAGAA
AGCCGTCTCCACGTGAACTGGTGGAACGTGCGTCCTTGTGAGCCTCGCAT
CCTGTCCCCTTCCTCTCATCACGAGGCTAAGACACAATGAACTCATTCTC
ACTCATGGCTGATTCTGAGAAAAACGTATTGACTGTGAAAACAGTTAAAT
AGAATTCTATTAGCGTCTATTAGCATGTCGATTTAACAGCGGGATCAACC
CCTTTATTTTCATATCGTATTGTAGCAGCGGGTAGTACATGTATATTTTG
ATTGCTTTTGATGTCATTAACCAATAGTTAACTTCCCTTGTAGCTGTCCT
GTAACTATGGTTACAATGTTTTTCATAGCAACCGTACATAACATCATTAC
TGGGCAAGGTTGTACAAGAAGGTCACGTCAAAAGTGACGAACATTTTTAG
GTACGAATAAGTACGGTTCAGTTTTTCCATATACTATCTGTAAGTGTCAC
TTTAGAATTTAGCTAATTCTATTCATTCAAATAGGATAAACACAGGAAGT
AAGATCTCAGTGAGTAAACAATATCCAGTGTAACGGACTCCTCTTCTGCC
AGGTTCAGGCCAGATCCAGCTGTGGCAGTTCCTCCTGGAGCTCTTGTCTG
ACGCCGCCAACGCCAACTGCATCACCTGGGAGGGAACCAACGGCGAGTTC
AAGATGACGGACCCTGACGAGGTGGCGCGGCGCTGGGGGGAGCGCAAGAG
CAAACCCAACATGAACTACGACAAGCTCAGCCGCGCACTGCGCTACTACT
ACGACAAGAACATCATGACCAAAGTGCACGGCAAGAGGTACGCCTACAAG
TTTGACTTCCACGGACTGGCCCAGGCCGCCCAGGCAGCGGCAGGCGGTAT
CGCCTCCCCGTACAAGTTCCACACAGAACTGTCCTACCTGCCCGGGTACC
CGCACGGGCCCAAACTGAACTTCATGGGAGGACATATCCCGTCGTCCTCT
GCAAACCTGTTCGCGTCGCCATCTTCCTACTGGTCCTCCACAGCAGCGGC
CAACATCTACCAGAACCATGGCATGACGTCACATCCGGGGCACTTAAGTT
CTTATTACCCTTGAAACATTCGCTTTCTTTTCTATAATCTCCCCAGAAAT
GAGAACCACGTGATAACCACGATCTCACGAGATCTATAGTCCAAACATAG
TGACGATAAAAGGACCTTTCCGAACGGTTCAGAGAAACACTGATTGATAA
AACAACATAGTGACCCACTACGGGCTGATCATGATTGTTCTCATCCAGAT
GGTATAAAAGACATTGCGCATGCCCACGCGCATGGCATCTAGGGTGTATA
TTGGTGAGGCTCATCGGCCATGTTTGCCGTGGAAGACATTTTGACAAAGT
CAAAGATTGACTGTTTACTTGGAAATCAGAGAAGTGTAACTTCAGAAGTT
CAGAAATTTTATTCTTTCAATTTGTGGGACCAAGTTGGAAAAAGATCGTG
CATGAGGATGTAGTCCGTGTAAATCAAAGCTTTCAGGCTACAACAGACCA
ATGTTTATTTCTGTTGTTTAAGTGTGCATCTTTTTCCTTCTCTAAACTGT
ACACACCAAGTCTCTCAAGATAGATTTATGTTGATAAGATGCATAAGATC
AGTTTCTTCAACTACATAATAGCGTAACTTAAGTAGAACACAACTTGGAG
TAGAATACATTGTAAAAAATGTATGTCTGTAAGTATGGATATCAATAGAA
AAATAATGTTTACCAAGTCTATACTATTGCAACATGTCCTTGTCAATGAT
TTTCCTCTTCTTTTGACTCGTCATTATACACATGTTGAACACTAAACGTT
GTGG Coding sequence (CDS) from alignment at Sc0000229:392784..401587- >BlTCONS00113596 ID=BlTCONS00113596|Name=BlTCONS00113596|organism=Branchiostoma lanceolatum|type=CDS|length=732bp|location=Sequence derived from alignment at Sc0000229:392784..401587- (Branchiostoma lanceolatum)
ATGTCTTTACTCAAAGCTTCAGTGTCATCCGACTGCTACAGTCACCATCG
TTGCGCCTTCAGTATACCGATGTTTCTCGCCGACCCGTCGTACGAGTGCC
TGATGAGAGAGCGGCAGGCGGCGGGGGGATGGAACGCTCAGGCAGGCTCC
GCCTCCACAGAGAAAGTGACAGACCCGTACCAGCTGTTTGCCCCCATCAC
CAGTCGGCTGTGCAGCCAAGGTTCAGGCCAGATCCAGCTGTGGCAGTTCC
TCCTGGAGCTCTTGTCTGACGCCGCCAACGCCAACTGCATCACCTGGGAG
GGAACCAACGGCGAGTTCAAGATGACGGACCCTGACGAGGTGGCGCGGCG
CTGGGGGGAGCGCAAGAGCAAACCCAACATGAACTACGACAAGCTCAGCC
GCGCACTGCGCTACTACTACGACAAGAACATCATGACCAAAGTGCACGGC
AAGAGGTACGCCTACAAGTTTGACTTCCACGGACTGGCCCAGGCCGCCCA
GGCAGCGGCAGGCGGTATCGCCTCCCCGTACAAGTTCCACACAGAACTGT
CCTACCTGCCCGGGTACCCGCACGGGCCCAAACTGAACTTCATGGGAGGA
CATATCCCGTCGTCCTCTGCAAACCTGTTCGCGTCGCCATCTTCCTACTG
GTCCTCCACAGCAGCGGCCAACATCTACCAGAACCATGGCATGACGTCAC
ATCCGGGGCACTTAAGTTCTTATTACCCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113596-exon-Sc0000229-1564993656:401149..401587 | BlTCONS00113596-exon-Sc0000229-1564993656:401149..401587 | Branchiostoma lanceolatum | exon |
| BlTCONS00113596-exon-Sc0000229-1564993656:400617..400700 | BlTCONS00113596-exon-Sc0000229-1564993656:400617..400700 | Branchiostoma lanceolatum | exon |
| BlTCONS00113596-exon-Sc0000229-1564993656:397866..397919 | BlTCONS00113596-exon-Sc0000229-1564993656:397866..397919 | Branchiostoma lanceolatum | exon |
| BlTCONS00113596-exon-Sc0000229-1564993656:392784..394035 | BlTCONS00113596-exon-Sc0000229-1564993656:392784..394035 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000229 | genome | Sc0000229:392784..401587 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055725 |
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