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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000229:287831..293887- Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113584 ID=BlTCONS00113584|Name=BlTCONS00113584|organism=Branchiostoma lanceolatum|type=mRNA|length=6057bp|location=Sequence derived from alignment at Sc0000229:287831..293887- (Branchiostoma lanceolatum)
CCTGGGGTCGTTCACCTGACGTTGTGGTTTAGTTGCGGAAAATGTCCATC
TCATGTCACGTCCCCGGTATTGTTTACTACAGACAAGGTGCGCCGTGTGG
GCATGGTGATCAGACAGGTGACTAACATAATCCAACAGCCAAACAGTATA
AACACAGTCTGGGGGTCCCCTGTCCGTTATTTCATCACCACATGTTGACA
GTCAACTTGTTGTTCGAAAGTTCCGATCGTAATATTTTTCCAGTGATTAA
GTATGTCTGGTGCGGACGCTTTCGTGAAGTGCCCCAATGTTACTATTTAC
AACAGGAATGTACGTATTGTCAGGCCGTGATGGTTTGCCAGACTTATGTT
TTATAAAGTGCAGTTGATTTTTAAGAAAGTACGCTGTCGGCANGACGCGT
TCGTGAAGTGCCCCAATGTTACTATTTACAACAGGAATGTACGTATCGCC
AGGCCGTGATGGTTTGCCAGACTTATGTTTTAGAAAGTGCAGTTGATTTT
TAAGAAAGTACGCTGTCGGCATTGTGGATTAAATGTTATGTTGTTGCTTT
TCCTCAGCTGGTTGAAGTGGACCCAAAAGTGAGGAAGACTCTGACCTTCA
CACTGCCGTCCCCCACATCAGACCTGGACTGTGTGGTGCCAACCGGCGCA
GAGTACCTACACGACGACCAAGATATTTCTCTCGGTAAGTCCAAATTATA
TGTTTCTTTTTTTTTTCTTCGGAATTACCAACAAAGCTCCTTGGTTACCA
GCATTTTTCTTTTAATCTCTAGAGCTTTTCTCGATTTATTTTTCTTTTTC
TAATGTGTTTCTTCTTCGCTCTCACGTTTCCCACACTGTTTGTCTTTTAC
TAACTTATCTTTGCAATTTTTAATTAGTTCTGTCAACAAATCCGCGTATG
TAATCAGACGCATTCCAGGCTACGAATGAATTATGCATGAGACGTTTCAG
ATTACGTCAGATTGGCAAAATGATTATAAACGCGATCTTTAATCCAAAAC
ACACCTAATTCAAATGGCTTGCTGGAACAGTTCCAGTTTGCCCATCTTGT
GGTTTGTGGTGCCCATCGTGTGTGTGGATTATTCGCGCCCTTAGCAGGCC
CCAGGGCAGTGGTGGGTGGGACTCCCATGGGCTTCTGAAAAACAAGACAT
CTCATTTCTGTGTAATCCAAACAAGCTGACTCACTGAGCATGGCTGACCT
TGCATCTTTGCCAAAAGATAAGCTAGCCTTGCCTGGCAGTAATGAGATAC
GAGAGCGCGCGAAGGACAGATCAAACCCCGTCTCTTACAATTGCACAGAA
GGTCATCTAAACACCCAATCAAATGCCAGCGCCGAAAATAGTCTTCCTGA
GTGGCTGACAAGGTAAAATTGGAAACCTGAGTCCCACTATCGCCTGGATA
CAGGCACGGTATCAGTGAGCCTCCCTGGTTTTCACTTAGCAAAGGTGTTT
CCTATTTACAGGGATTACGGGTAACCTTTCGGCGAGTGTGTCGGGGCCTA
ACGATATTAGAAAAGGCGGTGGAGACAGGGTCCAGAATTGATATGATTGA
TTCCGTTTATTTCTTACAACATCGCCCTCAAATTCAGAAGACGACACAGG
TCCACATGTGGTCATTCAATACGCCGAATTCAATACTCCCCGAGAAGGCT
TTTCTCATTCAAATCAGGCATCATCTGATCTGGCCCAGGGCCCTCTAGGA
GGCGGGATTTGTGACGTCACGCGTGGGCGTCCGTCTCTCACCAGACGTGA
CCAAATATGGTAGCGCTCAAACAATGCTTATGTATGATGTCACCCGCGCC
AGCCTTCATTCATAAAACTGGCGATCGTGCCAGACGACCGTAACATTAGA
GTACGCCGCAGTTCGGGAAGGATGGTTCTTATCAGGGGTACGCACACTTC
CCAAATTTCTTAGGCCACTCACTACTAAAGCTTGTGCGCCTGTGCTGACT
TGATCATTCTGGCTTCTGTTTTCGCTTGGGACGGCAGCACGATTCGCCTC
CTTTCTCAATTCTACCGCTCGTCCGCCACTTTTTGAAGTCCTTTAGTTAC
TTCGGCTCTGGTTTTTCCATGTCTTCAGGTATTTTTTTGGCCGGAATTTG
CTGGCGACTTTTCTTTACCTTTCATTCTTTCTCTCTTGTATGCTTGTATT
AGATTACCTTCCGCTACTATAACGCTACATGGTCTATGTGTGAATCACTC
TTCTGTCATAGTCACAATTAGTGCATGCGTTCTATTAATTACTTGTTGTA
ACTTTTCAACTTTTAAATTTGTTTTCTTTTCAAAGTTGTTTTCTTTCCAT
TATTTAGATATTGGCAAGTCGTTTTAATAATAGTCATTTGCTGTTTTAGT
AATCAAACTGGAATTTAGTTGCCGAATGCCTTGTATGTCACCCGTTACCT
ATTTATGTGGCCGAGGTCAGGCTTGAAGTGATTGCGACAGCATGTCACCA
GGCCGTGCAAAGCTACACGTGTTTATCCAAGAGCGCTGGCTTACGCCTGA
AGGCCGCCAGTGTCCCATTTGTGTAAAGTTTGTACTTCGTGATGTTCCGC
AACTGGAACGCCCTTCGTGTTGACTGACAGTTCACTGTGGATGACGTTAG
CCATGGAGCGAAAACTAAAGCGAGCTTGTTATGTTTTGTCTTCACAGACT
TGCACCCAGCCATTCCACCAGTCACGCCTGGCACCAACGCTCTCATGACG
GAGTGCCTCAAGCAGAGCTACAGCAGCTTCAAGGAGGAGCGCCAGAAACT
TGGCATCTTCAAAGGTAAATATTATTTTTAAAAGGGACTTAAAGAAATCA
CAACAAATTAAAAATGATACTGCTAGAGTTGCAGTTTCTTGGGAAAACAC
CGGGGAGTGATTTGCCCCACGACGTCACCATGGGTTGGGCACTGGTGCCT
CGGGGCGACGGTTGATTTTTAAATGCTTTACAGTGGGTTTGGGTTTCATG
TAATTATACCTCTCGCCGAGTACAAATTAACAACAGGCCAATGTGTTTTT
AATAATCGAACACATTATGGATGTTATAGAAATAGAACGTTAAACAAACA
ATTAACTTATTCTTAACTACCCAAGATTATTTAATTTGAAATGATACTTA
CTATCTTACTTGCTTTTGTTTCCTGATAGATCCTCGCCAGTGGTCCGACA
CTCAGGTCCTGCAGTGGGTCTCCTGGGCGTCCAGGGAGTTCTCCTTGCAC
GGAATCCGACCCTCCAACTTCACAGTGACAGGCAGAGAGCTGTGCTCCAT
GGACAAGGACAGGTTCCTCAGCCTGGCCCCTCCGTTTGTTGGAGACATCC
TGTGGGAGCACCTGGACATGCTGCAGAAAGGTAAATATCGGTCATGCACT
TTAACAACCTGAAATTTCCAGTTATTTCTCTTGGTGAAATTCTATAGTTT
GGTTGACCCTGAAGCGTTACTAAGCCTTCCTTTGTTCCTTCTGTGTTTTC
TACAGAAGTGGATGAAGACAAACAACAGGAGTTTGTCAGCAAGACCACAA
ACATTCCTTTGGAAAGTGTGCCAGCCAATTTCTACGAATCCGTCTGCATG
CCTGACTTCAACGACTTCCTGGCGAGAGGAGCGTTGCCGGGACAGGCCTT
CTGTGGAGGTGTCCCCATGTTGGATTCACAGCTCATGGAAGGCACCAGCT
ACCAGATCTCAGAATCTCTGCAGACCTTGAACGACATCAACGCAGAAGAC
CTGCTGCCAACGCACAAGATCAAGACGGAAGACTCCGACTACTACAGCTG
GGCATCTAGCACCCCCTCCCCCTGCTCATCGTACCAGACCGAGGAGTCCT
ACGACAGCATCGTCCCTGAATATTACCCCACATTCCAGCGGAACACCAAG
CCCATGCAGTCCGGAGGACAGGCGTACGAGAGACCAATCAGAGGTAGGCA
TCACATGCTTTAAGAGATAATTTTTCTGTCACTTTTAACTGACTCTTCTT
GAAATTGAATACATGTCTTACTTGACATTCTTCTAACAGTGTATTGTCCA
ATTTGTGTTTTTTTAGGAAAGTTCGGAGGGATGAACAACACGTACCAAGG
CGAGTACAACAACAGTAGTTCTCCCTATGGCAGCTTCAACCCTTCAAGCA
GCGGTCTGCAGCGGGTCCCCTCCTTCTCCTCCCTCAACAGTAGCCATGGC
AACGGAGATTTCAACGACTTCTCATTCAACACACAAGAGTCCAGACCGCA
GACAGTCGAACCCGGCAACCCTGTCATCCAAGCCGCTGTGTTGGCCGGAT
ATTCTGGTGAGTGTTTGGATAAAGACACCCTTACAGTTCCACTTTTGTAG
TTGGGGGAGTTTGGCAAGAGGTTACAACCTTAAGTTCAAACAGAAAACAA
TCCCTGTATCAACTTAGTGGGAGGATAAAGCTGTCAAGATAGAAATTGCT
TCTGTGTGAGGCAAGGCTTCTCTGAGATTAAGGTCAGCTGTTGTAACGTT
TCAATGTCAATATAGGTACTTAATTGACACGTGTGAAACAAATTACTTAA
TTTCCCTTGTTTTTATTTCAACAGGCAGTGGCCCTATCCAGCTATGGCAG
TTCCTGCTCGAGTTGTTGACAGACAAGTCCTGCCAGCACTTCATCACCTG
GACCGGTAACGGCTGGGAGTTCAAGCTCATCGACCCTGACGAGGTCGCCC
GCCGGTGGGGCATCCGTAAGAACAAGCCCAAGATGAACTACGAGAAGCTG
AGCCGTGGTCTTCGCTACTACTACGACAAGAACATCATCCACAAGACGTC
CGGGAAGCGGTACGTGTACCGGTTCGTGTGCGACCTGCAGAACCTGCTCG
GGTACACACCAGAGGAGATCCACGCCATGGTCGACCTCAAACCCGTGCTC
AGCGACGACGAGGAAGACGAGAAGTGAGCCGGAGGTCGAACTGAACTTTG
AATCCTGGCTAAAGCAATGATGACTTGATCAGGTCTGGCTGTGTGACACA
CGGTCTTGCATTTCTTGTCCGTCCATCATTCGTGTTGGCGGGCTGATTTC
TCTGGCTCACTTGGCGTCGGTTCTGTACTGACATGTAAAGGGCCATGCTC
CTGGCCTAAGTGCAATACGACATTCGCATGTGTGCGGTTTACGGTCCACT
GTTGGGACCTACCAAGTGTTCTTTCGGGCTGGTCCCCTAGTATAACCTAA
CAATATCCAGGGTTTGTACCAACCAGCCCAGGGAAGTAGAGTCGTATTGT
TGGGTACCACCCAAACTAAGAAGAGGGATGTAAAAACACTTCGTTGGCAT
TTGTCTGACAACTGTGTATTTAAACCTCACTTATTCACTGCCAAACAGTA
CTGTGTACTTACTGAGTGAGAAGCTATCCACTCATATCCATTCCTGCTTA
GATCTGTATCCACAATGCAGTGAAATGACTCTAAAACTTGTGTCTTGTTC
TCGATGTTTGTGAATATAAATGTCAAACTTTGTATATTTTTTATATCGGA
TTGACCTAAGAGTAAGATAAGGTTTAAAACAAAGGAAGAAGTGATGCAGG
CGTCAGGCTAGTTCTCCAAAGCAATATGTATTTTGGATGTTATTGGTCTT
GTTTGTTGCAGGGGGTTGAACTAGATGGCAGGACCTGAATTTAACATGTT
GCGAGGACAATGATATTGATCGTCCAGAAATGTTTTAACGCCAAATGCAA
GGTGTATTACTTATTGTACAGATCCTTATGTGGAGACATGTAAATATGTT
GTCATTGTTCAGCTTCTGTTGTAAACCTATTCGTGAAGAATAATGAAAAC
CTGGCTATGTGTCAGTCGTAAACCGACTGAATATATGAAGAAGAAAGGTA
ACCATTCACAGTATTGTGATTCACAAGGGGACAAAGAAACATAGTCCTGG
AGGACTTTATATTGGAAGTAAAGGGTATTTGTATACTTTTGTACGATACA
TGAGACGTTCTAAATATATCTATCTATATATATGTATACCAAGTGCCACT
TAGTGAAAGTGTTGAACTTTGTACTTTTTATACGTTTGTTGGAATAAATT
ATACATGATCGTGAATCAGAATCTGTTGTGTACTAATTTGAAAACTCTTA
CTTACTG Coding sequence (CDS) from alignment at Sc0000229:287831..293887- >BlTCONS00113584 ID=BlTCONS00113584|Name=BlTCONS00113584|organism=Branchiostoma lanceolatum|type=CDS|length=1593bp|location=Sequence derived from alignment at Sc0000229:287831..293887- (Branchiostoma lanceolatum)
CCTGGGGTCGTTCACCTGACGTTGTGGTTTAGTTGCGGAAAATGTCCATC
TCATGTCACGTCCCCGGTATTGTTTACTACAGACAAGGTGCGCCGTGTGG
GCATGGTGATCAGACAGCTGGTTGAAGTGGACCCAAAAGTGAGGAAGACT
CTGACCTTCACACTGCCGTCCCCCACATCAGACCTGGACTGTGTGGTGCC
AACCGGCGCAGAGTACCTACACGACGACCAAGATATTTCTCTCGACTTGC
ACCCAGCCATTCCACCAGTCACGCCTGGCACCAACGCTCTCATGACGGAG
TGCCTCAAGCAGAGCTACAGCAGCTTCAAGGAGGAGCGCCAGAAACTTGG
CATCTTCAAAGATCCTCGCCAGTGGTCCGACACTCAGGTCCTGCAGTGGG
TCTCCTGGGCGTCCAGGGAGTTCTCCTTGCACGGAATCCGACCCTCCAAC
TTCACAGTGACAGGCAGAGAGCTGTGCTCCATGGACAAGGACAGGTTCCT
CAGCCTGGCCCCTCCGTTTGTTGGAGACATCCTGTGGGAGCACCTGGACA
TGCTGCAGAAAGAAGTGGATGAAGACAAACAACAGGAGTTTGTCAGCAAG
ACCACAAACATTCCTTTGGAAAGTGTGCCAGCCAATTTCTACGAATCCGT
CTGCATGCCTGACTTCAACGACTTCCTGGCGAGAGGAGCGTTGCCGGGAC
AGGCCTTCTGTGGAGGTGTCCCCATGTTGGATTCACAGCTCATGGAAGGC
ACCAGCTACCAGATCTCAGAATCTCTGCAGACCTTGAACGACATCAACGC
AGAAGACCTGCTGCCAACGCACAAGATCAAGACGGAAGACTCCGACTACT
ACAGCTGGGCATCTAGCACCCCCTCCCCCTGCTCATCGTACCAGACCGAG
GAGTCCTACGACAGCATCGTCCCTGAATATTACCCCACATTCCAGCGGAA
CACCAAGCCCATGCAGTCCGGAGGACAGGCGTACGAGAGACCAATCAGAG
GAAAGTTCGGAGGGATGAACAACACGTACCAAGGCGAGTACAACAACAGT
AGTTCTCCCTATGGCAGCTTCAACCCTTCAAGCAGCGGTCTGCAGCGGGT
CCCCTCCTTCTCCTCCCTCAACAGTAGCCATGGCAACGGAGATTTCAACG
ACTTCTCATTCAACACACAAGAGTCCAGACCGCAGACAGTCGAACCCGGC
AACCCTGTCATCCAAGCCGCTGTGTTGGCCGGATATTCTGGCAGTGGCCC
TATCCAGCTATGGCAGTTCCTGCTCGAGTTGTTGACAGACAAGTCCTGCC
AGCACTTCATCACCTGGACCGGTAACGGCTGGGAGTTCAAGCTCATCGAC
CCTGACGAGGTCGCCCGCCGGTGGGGCATCCGTAAGAACAAGCCCAAGAT
GAACTACGAGAAGCTGAGCCGTGGTCTTCGCTACTACTACGACAAGAACA
TCATCCACAAGACGTCCGGGAAGCGGTACGTGTACCGGTTCGTGTGCGAC
CTGCAGAACCTGCTCGGGTACACACCAGAGGAGATCCACGCCATGGTCGA
CCTCAAACCCGTGCTCAGCGACGACGAGGAAGACGAGAAGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113584-exon-Sc0000229-1564993656:293771..293887 | BlTCONS00113584-exon-Sc0000229-1564993656:293771..293887 | Branchiostoma lanceolatum | exon |
| BlTCONS00113584-exon-Sc0000229-1564993656:293204..293330 | BlTCONS00113584-exon-Sc0000229-1564993656:293204..293330 | Branchiostoma lanceolatum | exon |
| BlTCONS00113584-exon-Sc0000229-1564993656:291124..291240 | BlTCONS00113584-exon-Sc0000229-1564993656:291124..291240 | Branchiostoma lanceolatum | exon |
| BlTCONS00113584-exon-Sc0000229-1564993656:290558..290758 | BlTCONS00113584-exon-Sc0000229-1564993656:290558..290758 | Branchiostoma lanceolatum | exon |
| BlTCONS00113584-exon-Sc0000229-1564993656:289995..290432 | BlTCONS00113584-exon-Sc0000229-1564993656:289995..290432 | Branchiostoma lanceolatum | exon |
| BlTCONS00113584-exon-Sc0000229-1564993656:289632..289871 | BlTCONS00113584-exon-Sc0000229-1564993656:289632..289871 | Branchiostoma lanceolatum | exon |
| BlTCONS00113584-exon-Sc0000229-1564993656:287831..289363 | BlTCONS00113584-exon-Sc0000229-1564993656:287831..289363 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000229 | genome | Sc0000229:287831..293887 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055718 |
|
