|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000229:269778..277547- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113580 ID=BlTCONS00113580|Name=BlTCONS00113580|organism=Branchiostoma lanceolatum|type=mRNA|length=7770bp|location=Sequence derived from alignment at Sc0000229:269778..277547- (Branchiostoma lanceolatum)
GTACAAGGAGGTTCAAATTCAAGCCAGTTTGGCCAGTCATAATTCTTCAA
CGAGCTTCAATGTTCTACTCCTAGGAAACAACGCACAGTATGAACGCATG
TATTAAAGAAGACACGCGTTAGGATAGAGTTAAGTACGTTCTACTACTGT
TTGGACAGGTAAGATCGCAAGATTTGACAAAGTATGGAATTCAGTTCCAT
AGTTGCTGTGAAATCACTAAAACCAGTCTGTGACTCTGACCTCTGCTCTA
AATCTCCCGCCATGATTGAACGCAGCAAAAGGTAGAGAAATGGTAAAATG
TCATAAATACCGTAGAAAAACAATATATTCACAACAAACATGATTGATGT
TCAATAGAAAATTTACTATATAGGACAATATACGCCAGTAATTACCATAA
ACGATCACAATGGACGTGTCTGAAGTTTTTGTTACGTTTGGATTCTCCAG
TCTAACGAAAACAATAAAATGGCGGCCAGGGGAACTTCCTGAACATCGCC
CCCTGCCAAACAACAACATTCCAACTTTATTTATCGACCAAATCTAGCCG
TCTTTAGATACATCTGACATTCGGTGAAGAAGATGGAGTTCCATAAATCG
AGACCAAAGCTCATTCGGATGGCGAGCAGGGAACAAGAGACACAGACAGA
CAAACAAACTACTGGTACAGGTAAGTCTGTCTCAGTTCTTGTTGACAAAC
AACATAGTGCAAAAATCTCCCCTCCCACTTTGGTTACGATTAATCTTTAA
CCTCCTCATATTTGTATTTGGTCAAATGTTTGGAGCACCTATTCTATAAG
TGCAGATTTCCATACGTGGTCACGTAGAAGTACTTATAGCTCGTCTCGAC
TCGCTAAACGGCGAGGCATAATTTTGGTCCAGCCTGCGGGCTAGTAGGTT
CAAGGAGGAAGGAACAAAGAAAGTCTTTTTGTCTCTTCTTTACTGTACAA
CGTCTTACTCTCACGAACAAGTGTTCCCAAGTATCTCGAAGTTTCCATTT
CCCAGTGGTTACACTAGTACGTTGTTCTCCTCAGCTGTCTCTGTGGCTTA
GCTAGGTGACTTTTATTTCTAACTCTCCTCTCCACCTTGTTTCTGCACAC
CTGCGGCACCTGTAGGACAGGACATGGAGGAACACCTGTCACCAGGTGAG
TCACAGCTGGACAATACAACCCTCTGATAATGATGCCTTTATCTTCATTG
TTATACTAATTATCCTTGTTCACTTCCTTATTTACCAGGGATAAGATACA
CCTACTGGGTCAAAATTGGAAGGGTCATCTCTTTCTCATTATGATGACCT
CCATACTTCCTCATTTTGTACTAAATAATGTTATTCTTATTTTGCTTTTC
CTTTTTAGCCATTCTTTCTTGCTGTTGAGTCAAAAATGCAACTGGGAATC
ATGCCATAAAGGATGTCCTGCTCTAGTCAGTATTGACTATTGGTATCCTA
TAATGACTGAAATTTTAGTGAGGCAACAAATACAACTGGCATGTCAGGAC
TACAATGTTGACTGTCTTGTCAGGGAGATGTCCTTTTCTGGCACTGCTGC
CAAATGCACAGCAGGAGCCCATCCCTTGGATGACATGTAGATTTTGATTG
TATGTTTCCTTGGTCCCAATGTCGAATTCATATGCATGATGATAAAAAAA
AACAGGCCCGCATTACACACATTATCATTTTCCAGTTCCCTAAAACTATA
TAGTTGCTATTCCTGTTCACCACCACAGTGATGTCATATGTGTTGCTCCC
ACTGGCTCTCTCAAAATTATCATCATCATCATGATGGTGTGCTATTCTCT
CCAAAGAGGAACCACTCCCTCTCAAATAAAGATGGCTACTTGTAAATTGG
GTGTGTTTGCCAGCATACACAACATGGTTCATTGGTACACACCTGTCTTT
GTGCACCATATTGTACAGTAATGGTTCATTCCTCTGACTTAAAAGAGGTC
TATGATTTAAAACACATTTGTAGTGTTAGCTGTATCTAAAAGATGTTGTC
ATAAAAACTGTGGGGTTTTTTTTTGTGTGTGACAGAGGGTTCAGACAAAT
CAGCAAAGCTAACTGACTGTTGGTGGCAATTGACCTTTGATTTTCCATAT
GTATCAGCCATTTCAGCCGGTACCAAATGTCAATGTTAGAAGTTAGAACA
CATCAACCTTTGTTTGAAGACATATGCAAAAAGGCATCTCTGTTGTTGCA
TTTGAAAAAAATTCAGTACCAACAGTATTATTATTGACACATTTAAAGTT
TTGAAACAAACTGGCAGCCTTCAACCTTTCTGCATATCATAATGTATAAC
CTATATGTCAATTAAGTGACCCCAAGGATTGACCTTTACCAATAAGTTAC
TGTGATAAAAGGGTTTGTCCTTTGTTGTGTCCTCCTTGTGATTCCAGGTG
TGGAATTACCATAAATCAGTCATTAACTGGACCAAATATACCATTGCTTG
CTTTGTCACAAACATTCACAGAATTATCTTATGCAAGGTAGTGCTAATTC
CAAACAAAAGCTGATTCCAATGTTCTGTGAAAGGCTACATGAATGTCATT
GTTGGCATTGATGACTTGTGTATACACTGCATAGAATTGTAATAGATGCC
AAGCCATGCTAATGGATTGAGGTAAAGTCAACAAGGATGTCATCCAGTTG
CAATGCAGATATGTTGACTTTAGCTTTCTGACTACTTGGGCATGTGGATT
TTGATGTAAGTGTGTGTCATGGTACAGGTTTTGGTGTATAAAAACTTTGG
GAAATTAGTAGCAGAACAATCCATCAATTCATGTAAAAGTGTTCAAACAT
CATTTCATTCTTGTGGCTATACATGTAAGTATAACCAGTTGTGATGTATT
GATGATATGTTTACAAATGTTAAACATAATCCACTGGTATAGACTTCTCC
CTGGTGCCTAATTAGAGAAATGTAAGTGTAACCAATACAAATTTGGTGCC
AAAAGGCTATTTCAGCAAGGAGAAGGGATCTGTACATGTTGCTATGAAAG
CTCAACTCACCAGTCAGCATGTGTCATGTTCTTTTGGGCATCCTATGTTT
AGACTTATGACTTGGTGCCAACTGCGTACTACTGCCATGAACTGGAACGA
AGTGGAAGTTTCCAGATAGGACGGTGTCATTTCGGCTATAAAAGCCAACA
GATTGCAACATACGTATCACACAGTCAACAGTACAGCATAGGAAGACAAC
TACTGAAAAAGAACAGTCAGGATCAGTGAGAAAACAAGCAGAAAGATAGT
AAAATGCCAACATCTGGTAAATATCACCTCTTTTACATTAATTTATACTA
CAGAACATTTTTATTCCCAAGGATTTGTATTTTTCTTTGATTTTGATTTA
TTGGTATAAAGTGGACTCAGCACATGCACGACACTGTGTCAACTTGCCAT
CAAAGGAATAATTGACATAAATTTGAGCAACTGACATTATAATGATTATT
ACTTGTCGACTTGGTACTGTGAAGTATCTTTTTTCAATGATGAATCTGTC
TGATCTAAAGGTAACAGAATCAATCAGATTTGTCAGGTTAAGTGGGTGGT
ATGTTAAATATGGTAGGCTGATAATATTACATTGAGTCAATACAATACAA
TACACTACAATGTTGTAGTGATTTGTGAGTCATTAAGTCATGAGATAAAA
GGAGATTTCAGAAAATGCAAGATGGTGGTCTTTGTAACAGAGTATGACGT
AGCTCACTAAAGCTGTGTGCTGCACCATCTAGGTCACATCACGAGACACA
AGAAGGAATGTCTGACAAACATGTTGACTGAAAACTGAAATTGGAGATTT
GTTTTGCAGCTCAAATTGGTTGGACTTTGGCTGCAGTCCAGGCCTGACTT
TATGGTGACATAGCTTATCTAACATTTATCATTTGGGCAGGGTATCATTA
TAGGGTTACAGCGGTGACAAGTACACCTCAGTTATACACTGACTGCAGTA
CTTCATTTCCATATTTCTATTAGTATTACTTTGTCTGTCTTGTAAGGAAG
GAATGGTGGTGTATATCTTATTGTCTCTTTTCTAATTCTATACATTCAAA
CAAATTTAGACATGTAACATATCACATTAGAAACATTAAAAAAACATAAC
CAATAAAATTTTAAAAACACTTTTTGATGCTGAAAGTCAATTGTCCCAAA
GGGGAAGTCAGTGTCTCTAGTTCTGAAATATTCCAAAAACAATCTCAGCT
CCCACAACATGTTTCTCATAACACTAGGGTGTATGAAATATGTTGGCAAA
GCTTTAAAACATTCCATCTGTTGACCCCTGACCTCTCCAACATGTACGCC
CTTATTGCACAATCCGAGGCCCATCTTGTGCAATCATATAGGATATAACC
AAGACCTTACGCAATCAAAATGCCTTAAGCAGGAGGGTCCAAAATCTGTT
TTGCTTGACAGTTTGTTATTACAATGTAAATCTTTGAAAAAAGGTTATGA
GGTACAAGTAGCTTTATTGATTTGGCCCTAGGTCAAAGGAGACACTGATA
GTAGCTCCGACATGTAGATTCATGTATTTTCCACTATCAAAATATATGTA
TTGTTAAACATGTACATGTATATTGTTCTGTCTGAAAGAATATCGGAAAT
CGCTATCACATTATGAATTAAATATCTATGTGTGTGCCAATAGATTCTGC
TAATACTATGAAGTATGAGTGGTCTAAATATTTTTGGAAAGAAACCCACA
GTAACATAATCCGCGAGCTTCTTACTGAATAAAATCAGCATCGGTATTTC
GTGCTGTTAGTATTTATACTAAAAAGCAGTAAACGTGGAAGAACATACCT
TTGCATGAACATACCTTACGCAATGATGTAATGTCTATTCCGCGGATTAA
AAAGAAGCATGTTTTCTTCATATTCAGAATCATTACTGTTCCTGGGAAAA
AGGCACTTGAATTCCATCTGCCCTAAAGGACTGCCCCTTGCCCAGTAAAT
GGAACGTTCCATTCAAATTTTGTAAATCAGCTGTTTGGCAAGAGGCGGCC
AGAAGGGGACCAGCTGGCCTGTGTTTTCTGGCTGCCATTGTGAATTCTAA
CCAGTGAGTGAGACTCAAAAGCTAAGCATATCTCCTGAACTACTGTTTTC
AGGTCACCATGGAGTCCCCCTGAGTCAAGGTACTGATAGCTTTTACATGT
ATATCATTATGTTGCTCTTTTGAGATAGAAACTGCAAGATTTGATACCTG
GAGGAATCATGAAGATCACTATGTCTATAGTCAGTGGTTGGAGCCTTCCA
AAGGTCAGACCCAGTGCACAACACCATCTACACAAGACTGTTATTTGTGA
CAGGGCAGAACATGTCACAACTAGGGATGGAAAATCTGCTCAATGCAGAC
ATTTTAATGTGTGTACATTGAGCTATAAGATATTGTATTTGTACTTTAAC
TGTAACATGTATTATGTATGAAAATGCTTGTTTTTTTGGCATGGCTGGGT
CAATAGATCAGTAGTTGGGGTAATAATTTGTAGGTCCCCAGTCTGTAGTG
TAAAAGGACAGGTTCAGTCCAAGCTGTGTTTTCATGTCATTTCTGCTGAA
AATTTGCCCTGGGCTTGCTTCAGACAGAAATGATCTGTCAATGATTCAGT
GTGTTTATCACAAATTTGGACAACTGTTGATTTATCAGATGGCAGGCAGC
ACAATTGTTTTTGTATAAGAGGTAAATGCTGACCTATGACCATCAGTTAT
TTGCCATCAGACATGTCCTCCTCAATCCTGATAACGTTTTAAATGTCATG
ACCTGTGGCACCTCCACAGCCTCTTCTTCATTCATATTCATTCCCCTACC
CAGTTAAAGCCAGCACAGGTAATAGATAGCGTCCATTCCGCCATTTATGA
TTTCACCGGCAAGTGGCGACAGGATGAGCTGTGACACAAAATGGCCTGTT
AGGTAACGGGAAAGCTGTCGTCTGTTGGTGATATAGTCCATTCTGTTCGT
TATCTGTGCTTATCGGTTCTTGGTGTATCAGGAAATCTAGAAATCCTGAT
TCATGTCGCTGCAGGCTGTTACAATGCAGCTTGATCAGCAGCAGTTGAAA
GATATTGATGTGCATGACTTGACATTTTTGTTCGCCATCAATTGCTCTCT
GCTTAAGTGCATTGTATTCGTACAGATTGCTATTTTGTGTTGATTGACCA
CACAATTTAATTACATCAATGATTCTAAATCATTTTCGATACCTGACTTA
CAATGAAAGATGTTTGCTTGGTGTAGCTAGCCAATATATTTATGCATTTT
GCTATAACTTGTGCTGATCATCTATTATTAAGTATTTCATAGTTTTTATC
ATGCAACTTGTAGCATTGTTACCATGCTCTATTTTAGGATATCCAAATAA
CATGTCTTTGCCTCTAGTCAATTTGAAATGTATGGGTTGGGGGGGAGGGG
CGTGCGAGTGTGGGGAGTGGGTTGTCCATCAGCATATCTTGTCTGACTAC
ATGTGGGCTGTCCTGATCAGCAAAATGCAAATTAGTAATTTTGATATCAC
TGGAGAGTTTGACCACTTTGTTATAATTTATGAAATTCTCCGGTAATTGG
CTAGAGGCAAGGATAATCAATATTTGTTTCCCAATGTCTGTCTCTTCAAG
ATTATGTCTGAGGTTCAATATTGTTAAAAGTGATATTTCACTTTCTATGG
CAGCTTTACTTAGTATTTTCATATTCCTTCACTCAGCATCTGATCCATAT
ATATGGCCTCCGTCGGTCAGTATTGACCATGGTAAAATCCTAATTCACAA
CAGTCCTACAGCATCGACTATGGCTAATCAGCCCTATACGAGAATGGCAG
TCTCTGCCACAAAAATCACATCTGTAAGCTGACTCAGTTCTGTTGCAAAG
CTCTTTTCTGTGGATCTGCTTTTCTGATCCACTGCATAGTTAACCATGTT
TGTCACAGAAATAACCAACCACTGTTTCTACCTCACACAGAGACTGAGCC
TGACCTGGCAGGGTCGCTGTCCCCCCCGCGGAACAACGTGCTGTCTCCCA
CCCGCTCGTCCTTCCCGAAGCATGTCCATACAGTCATGGACGACAAGTTC
AAGGAGATCGCCAACGACCTGTTCAAGCGAAGTCGCCACGAGTCGGAGAC
CTTCCACCCGGACCTCACGGCGCCGTACGAGTACCCCGACCAGTGTCCTC
TGGAGTCGGAGGACGAGAAGAAGAAGCGTCTGGAGCGACAGATGAGCCAG
TGCAACGATGTTAAGATTAAGTTTAAGTGAGTGGCAGTGCCCTTCCCTGG
AGTTTCACAGGCTGTAGCAAGTTGGATCACTCGTAATGAAGTGGAGAGTA
AAATTGGAACATTCAAAACAAGAGCATATTAATTATTATACCTAAGAGCC
TCCTTGGTTGAACCCATGAGGGACATGAAATGAAGTGTCTACAATACAAA
TAATTCTAGTCCTAATCCAGGCATGGTGGTACGATGACATGGCATGGGGT
GCTACCACAAGAAAACAATGGAAGAAGAAAAACCTATTTTACCGTACCAC
TGCACCAAAAATAGGTGACCATTGTTGGAAAGAATTTAGCATCATTTCCT
TTGAATGACAGGTATTGTACAGGAGGACTCATTATCCTTACAAACAAAGA
AATTCTGTACAACCCTGTCCATTACATGGAAATCAGTTCAATAGCTTTCT
CTTGACTGAGTCTTACAAAATGAGAGAATATAAAGAAGGAATGATTTTCA
TTAAAAAACTACTTGTACATCAGAAGAAAATTTTCTTAATATTTTTAGTG
GAATTACCCCAAAATAACAC Coding sequence (CDS) from alignment at Sc0000229:269778..277547- >BlTCONS00113580 ID=BlTCONS00113580|Name=BlTCONS00113580|organism=Branchiostoma lanceolatum|type=CDS|length=408bp|location=Sequence derived from alignment at Sc0000229:269778..277547- (Branchiostoma lanceolatum)
ATGGAGTTCCATAAATCGAGACCAAAGCTCATTCGGATGGCGAGCAGGGA
ACAAGAGACACAGACAGACAAACAAACTACTGGTACAGGACAGGACATGG
AGGAACACCTGTCACCAGAGACTGAGCCTGACCTGGCAGGGTCGCTGTCC
CCCCCGCGGAACAACGTGCTGTCTCCCACCCGCTCGTCCTTCCCGAAGCA
TGTCCATACAGTCATGGACGACAAGTTCAAGGAGATCGCCAACGACCTGT
TCAAGCGAAGTCGCCACGAGTCGGAGACCTTCCACCCGGACCTCACGGCG
CCGTACGAGTACCCCGACCAGTGTCCTCTGGAGTCGGAGGACGAGAAGAA
GAAGCGTCTGGAGCGACAGATGAGCCAGTGCAACGATGTTAAGATTAAGT
TTAAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113580-exon-Sc0000229-1564993656:276878..277547 | BlTCONS00113580-exon-Sc0000229-1564993656:276878..277547 | Branchiostoma lanceolatum | exon |
| BlTCONS00113580-exon-Sc0000229-1564993656:276403..276432 | BlTCONS00113580-exon-Sc0000229-1564993656:276403..276432 | Branchiostoma lanceolatum | exon |
| BlTCONS00113580-exon-Sc0000229-1564993656:269778..270607 | BlTCONS00113580-exon-Sc0000229-1564993656:269778..270607 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000229 | genome | Sc0000229:269778..277547 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055717 |
|
