|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000229:269778..274380- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113579 ID=BlTCONS00113579|Name=BlTCONS00113579|organism=Branchiostoma lanceolatum|type=mRNA|length=4603bp|location=Sequence derived from alignment at Sc0000229:269778..274380- (Branchiostoma lanceolatum)
CACACAGTCAACAGTACAGCATAGGAAGACAACTACTGAAAAAGAACAGT
CAGGATCAGTGAGAAAACAAGCAGAAAGATAGTAAAATGCCAACATCTGG
TAAATATCACCTCTTTTACATTAATTTATACTACAGAACATTTTTATTCC
CAAGGATTTGTATTTTTCTTTGATTTTGATTTATTGGTATAAAGTGGACT
CAGCACATGCACGACACTGTGTCAACTTGCCATCAAAGGAATAATTGACA
TAAATTTGAGCAACTGACATTATAATGATTATTACTTGTCGACTTGGTAC
TGTGAAGTATCTTTTTTCAATGATGAATCTGTCTGATCTAAAGGTAACAG
AATCAATCAGATTTGTCAGGTTAAGTGGGTGGTATGTTAAATATGGTAGG
CTGATAATATTACATTGAGTCAATACAATACAATACACTACAATGTTGTA
GTGATTTGTGAGTCATTAAGTCATGAGATAAAAGGAGATTTCAGAAAATG
CAAGATGGTGGTCTTTGTAACAGAGTATGACGTAGCTCACTAAAGCTGTG
TGCTGCACCATCTAGGTCACATCACGAGACACAAGAAGGAATGTCTGACA
AACATGTTGACTGAAAACTGAAATTGGAGATTTGTTTTGCAGCTCAAATT
GGTTGGACTTTGGCTGCAGTCCAGGCCTGACTTTATGGTGACATAGCTTA
TCTAACATTTATCATTTGGGCAGGGTATCATTATAGGGTTACAGCGGTGA
CAAGTACACCTCAGTTATACACTGACTGCAGTACTTCATTTCCATATTTC
TATTAGTATTACTTTGTCTGTCTTGTAAGGAAGGAATGGTGGTGTATATC
TTATTGTCTCTTTTCTAATTCTATACATTCAAACAAATTTAGACATGTAA
CATATCACATTAGAAACATTAAAAAAACATAACCAATAAAATTTTAAAAA
CACTTTTTGATGCTGAAAGTCAATTGTCCCAAAGGGGAAGTCAGTGTCTC
TAGTTCTGAAATATTCCAAAAACAATCTCAGCTCCCACAACATGTTTCTC
ATAACACTAGGGTGTATGAAATATGTTGGCAAAGCTTTAAAACATTCCAT
CTGTTGACCCCTGACCTCTCCAACATGTACGCCCTTATTGCACAATCCGA
GGCCCATCTTGTGCAATCATATAGGATATAACCAAGACCTTACGCAATCA
AAATGCCTTAAGCAGGAGGGTCCAAAATCTGTTTTGCTTGACAGTTTGTT
ATTACAATGTAAATCTTTGAAAAAAGGTTATGAGGTACAAGTAGCTTTAT
TGATTTGGCCCTAGGTCAAAGGAGACACTGATAGTAGCTCCGACATGTAG
ATTCATGTATTTTCCACTATCAAAATATATGTATTGTTAAACATGTACAT
GTATATTGTTCTGTCTGAAAGAATATCGGAAATCGCTATCACATTATGAA
TTAAATATCTATGTGTGTGCCAATAGATTCTGCTAATACTATGAAGTATG
AGTGGTCTAAATATTTTTGGAAAGAAACCCACAGTAACATAATCCGCGAG
CTTCTTACTGAATAAAATCAGCATCGGTATTTCGTGCTGTTAGTATTTAT
ACTAAAAAGCAGTAAACGTGGAAGAACATACCTTTGCATGAACATACCTT
ACGCAATGATGTAATGTCTATTCCGCGGATTAAAAAGAAGCATGTTTTCT
TCATATTCAGAATCATTACTGTTCCTGGGAAAAAGGCACTTGAATTCCAT
CTGCCCTAAAGGACTGCCCCTTGCCCAGTAAATGGAACGTTCCATTCAAA
TTTTGTAAATCAGCTGTTTGGCAAGAGGCGGCCAGAAGGGGACCAGCTGG
CCTGTGTTTTCTGGCTGCCATTGTGAATTCTAACCAGTGAGTGAGACTCA
AAAGCTAAGCATATCTCCTGAACTACTGTTTTCAGGTCACCATGGAGTCC
CCCTGAGTCAAGGTACTGATAGCTTTTACATGTATATCATTATGTTGCTC
TTTTGAGATAGAAACTGCAAGATTTGATACCTGGAGGAATCATGAAGATC
ACTATGTCTATAGTCAGTGGTTGGAGCCTTCCAAAGGTCAGACCCAGTGC
ACAACACCATCTACACAAGACTGTTATTTGTGACAGGGCAGAACATGTCA
CAACTAGGGATGGAAAATCTGCTCAATGCAGACATTTTAATGTGTGTACA
TTGAGCTATAAGATATTGTATTTGTACTTTAACTGTAACATGTATTATGT
ATGAAAATGCTTGTTTTTTTGGCATGGCTGGGTCAATAGATCAGTAGTTG
GGGTAATAATTTGTAGGTCCCCAGTCTGTAGTGTAAAAGGACAGGTTCAG
TCCAAGCTGTGTTTTCATGTCATTTCTGCTGAAAATTTGCCCTGGGCTTG
CTTCAGACAGAAATGATCTGTCAATGATTCAGTGTGTTTATCACAAATTT
GGACAACTGTTGATTTATCAGATGGCAGGCAGCACAATTGTTTTTGTATA
AGAGGTAAATGCTGACCTATGACCATCAGTTATTTGCCATCAGACATGTC
CTCCTCAATCCTGATAACGTTTTAAATGTCATGACCTGTGGCACCTCCAC
AGCCTCTTCTTCATTCATATTCATTCCCCTACCCAGTTAAAGCCAGCACA
GGTAATAGATAGCGTCCATTCCGCCATTTATGATTTCACCGGCAAGTGGC
GACAGGATGAGCTGTGACACAAAATGGCCTGTTAGGTAACGGGAAAGCTG
TCGTCTGTTGGTGATATAGTCCATTCTGTTCGTTATCTGTGCTTATCGGT
TCTTGGTGTATCAGGAAATCTAGAAATCCTGATTCATGTCGCTGCAGGCT
GTTACAATGCAGCTTGATCAGCAGCAGTTGAAAGATATTGATGTGCATGA
CTTGACATTTTTGTTCGCCATCAATTGCTCTCTGCTTAAGTGCATTGTAT
TCGTACAGATTGCTATTTTGTGTTGATTGACCACACAATTTAATTACATC
AATGATTCTAAATCATTTTCGATACCTGACTTACAATGAAAGATGTTTGC
TTGGTGTAGCTAGCCAATATATTTATGCATTTTGCTATAACTTGTGCTGA
TCATCTATTATTAAGTATTTCATAGTTTTTATCATGCAACTTGTAGCATT
GTTACCATGCTCTATTTTAGGATATCCAAATAACATGTCTTTGCCTCTAG
TCAATTTGAAATGTATGGGTTGGGGGGGAGGGGCGTGCGAGTGTGGGGAG
TGGGTTGTCCATCAGCATATCTTGTCTGACTACATGTGGGCTGTCCTGAT
CAGCAAAATGCAAATTAGTAATTTTGATATCACTGGAGAGTTTGACCACT
TTGTTATAATTTATGAAATTCTCCGGTAATTGGCTAGAGGCAAGGATAAT
CAATATTTGTTTCCCAATGTCTGTCTCTTCAAGATTATGTCTGAGGTTCA
ATATTGTTAAAAGTGATATTTCACTTTCTATGGCAGCTTTACTTAGTATT
TTCATATTCCTTCACTCAGCATCTGATCCATATATATGGCCTCCGTCGGT
CAGTATTGACCATGGTAAAATCCTAATTCACAACAGTCCTACAGCATCGA
CTATGGCTAATCAGCCCTATACGAGAATGGCAGTCTCTGCCACAAAAATC
ACATCTGTAAGCTGACTCAGTTCTGTTGCAAAGCTCTTTTCTGTGGATCT
GCTTTTCTGATCCACTGCATAGTTAACCATGTTTGTCACAGAAATAACCA
ACCACTGTTTCTACCTCACACAGAGACTGAGCCTGACCTGGCAGGGTCGC
TGTCCCCCCCGCGGAACAACGTGCTGTCTCCCACCCGCTCGTCCTTCCCG
AAGCATGTCCATACAGTCATGGACGACAAGTTCAAGGAGATCGCCAACGA
CCTGTTCAAGCGAAGTCGCCACGAGTCGGAGACCTTCCACCCGGACCTCA
CGGCGCCGTACGAGTACCCCGACCAGTGTCCTCTGGAGTCGGAGGACGAG
AAGAAGAAGCGTCTGGAGCGACAGATGAGCCAGTGCAACGATGTTAAGAT
TAAGTTTAAGTGAGTGGCAGTGCCCTTCCCTGGAGTTTCACAGGCTGTAG
CAAGTTGGATCACTCGTAATGAAGTGGAGAGTAAAATTGGAACATTCAAA
ACAAGAGCATATTAATTATTATACCTAAGAGCCTCCTTGGTTGAACCCAT
GAGGGACATGAAATGAAGTGTCTACAATACAAATAATTCTAGTCCTAATC
CAGGCATGGTGGTACGATGACATGGCATGGGGTGCTACCACAAGAAAACA
ATGGAAGAAGAAAAACCTATTTTACCGTACCACTGCACCAAAAATAGGTG
ACCATTGTTGGAAAGAATTTAGCATCATTTCCTTTGAATGACAGGTATTG
TACAGGAGGACTCATTATCCTTACAAACAAAGAAATTCTGTACAACCCTG
TCCATTACATGGAAATCAGTTCAATAGCTTTCTCTTGACTGAGTCTTACA
AAATGAGAGAATATAAAGAAGGAATGATTTTCATTAAAAAACTACTTGTA
CATCAGAAGAAAATTTTCTTAATATTTTTAGTGGAATTACCCCAAAATAA
CAC Coding sequence (CDS) from alignment at Sc0000229:269778..274380- >BlTCONS00113579 ID=BlTCONS00113579|Name=BlTCONS00113579|organism=Branchiostoma lanceolatum|type=CDS|length=303bp|location=Sequence derived from alignment at Sc0000229:269778..274380- (Branchiostoma lanceolatum)
ATGCCAACATCTGAGACTGAGCCTGACCTGGCAGGGTCGCTGTCCCCCCC
GCGGAACAACGTGCTGTCTCCCACCCGCTCGTCCTTCCCGAAGCATGTCC
ATACAGTCATGGACGACAAGTTCAAGGAGATCGCCAACGACCTGTTCAAG
CGAAGTCGCCACGAGTCGGAGACCTTCCACCCGGACCTCACGGCGCCGTA
CGAGTACCCCGACCAGTGTCCTCTGGAGTCGGAGGACGAGAAGAAGAAGC
GTCTGGAGCGACAGATGAGCCAGTGCAACGATGTTAAGATTAAGTTTAAG
TGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113579-exon-Sc0000229-1564993656:274282..274380 | BlTCONS00113579-exon-Sc0000229-1564993656:274282..274380 | Branchiostoma lanceolatum | exon |
| BlTCONS00113579-exon-Sc0000229-1564993656:269778..270607 | BlTCONS00113579-exon-Sc0000229-1564993656:269778..270607 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000229 | genome | Sc0000229:269778..274380 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055717 |
|
