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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000229:265884..274493- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113570 ID=BlTCONS00113570|Name=BlTCONS00113570|organism=Branchiostoma lanceolatum|type=mRNA|length=8610bp|location=Sequence derived from alignment at Sc0000229:265884..274493- (Branchiostoma lanceolatum)
TTATGACTTGGTGCCAACTGCGTACTACTGCCATGAACTGGAACGAAGTG
GAAGTTTCCAGATAGGACGGTGTCATTTCGGCTATAAAAGCCAACAGATT
GCAACATACGTATCACACAGTCAACAGTACAGCATAGGAAGACAACTACT
GAAAAAGAACAGTCAGGATCAGTGAGAAAACAAGCAGAAAGATAGTAAAA
TGCCAACATCTGGTAAATATCACCTCTTTTACATTAATTTATACTACAGA
ACATTTTTATTCCCAAGGATTTGTATTTTTCTTTGATTTTGATTTATTGG
TATAAAGTGGACTCAGCACATGCACGACACTGTGTCAACTTGCCATCAAA
GGAATAATTGACATAAATTTGAGCAACTGACATTATAATGATTATTACTT
GTCGACTTGGTACTGTGAAGTATCTTTTTTCAATGATGAATCTGTCTGAT
CTAAAGGTAACAGAATCAATCAGATTTGTCAGGTTAAGTGGGTGGTATGT
TAAATATGGTAGGCTGATAATATTACATTGAGTCAATACAATACAATACA
CTACAATGTTGTAGTGATTTGTGAGTCATTAAGTCATGAGATAAAAGGAG
ATTTCAGAAAATGCAAGATGGTGGTCTTTGTAACAGAGTATGACGTAGCT
CACTAAAGCTGTGTGCTGCACCATCTAGGTCACATCACGAGACACAAGAA
GGAATGTCTGACAAACATGTTGACTGAAAACTGAAATTGGAGATTTGTTT
TGCAGCTCAAATTGGTTGGACTTTGGCTGCAGTCCAGGCCTGACTTTATG
GTGACATAGCTTATCTAACATTTATCATTTGGGCAGGGTATCATTATAGG
GTTACAGCGGTGACAAGTACACCTCAGTTATACACTGACTGCAGTACTTC
ATTTCCATATTTCTATTAGTATTACTTTGTCTGTCTTGTAAGGAAGGAAT
GGTGGTGTATATCTTATTGTCTCTTTTCTAATTCTATACATTCAAACAAA
TTTAGACATGTAACATATCACATTAGAAACATTAAAAAAACATAACCAAT
AAAATTTTAAAAACACTTTTTGATGCTGAAAGTCAATTGTCCCAAAGGGG
AAGTCAGTGTCTCTAGTTCTGAAATATTCCAAAAACAATCTCAGCTCCCA
CAACATGTTTCTCATAACACTAGGGTGTATGAAATATGTTGGCAAAGCTT
TAAAACATTCCATCTGTTGACCCCTGACCTCTCCAACATGTACGCCCTTA
TTGCACAATCCGAGGCCCATCTTGTGCAATCATATAGGATATAACCAAGA
CCTTACGCAATCAAAATGCCTTAAGCAGGAGGGTCCAAAATCTGTTTTGC
TTGACAGTTTGTTATTACAATGTAAATCTTTGAAAAAAGGTTATGAGGTA
CAAGTAGCTTTATTGATTTGGCCCTAGGTCAAAGGAGACACTGATAGTAG
CTCCGACATGTAGATTCATGTATTTTCCACTATCAAAATATATGTATTGT
TAAACATGTACATGTATATTGTTCTGTCTGAAAGAATATCGGAAATCGCT
ATCACATTATGAATTAAATATCTATGTGTGTGCCAATAGATTCTGCTAAT
ACTATGAAGTATGAGTGGTCTAAATATTTTTGGAAAGAAACCCACAGTAA
CATAATCCGCGAGCTTCTTACTGAATAAAATCAGCATCGGTATTTCGTGC
TGTTAGTATTTATACTAAAAAGCAGTAAACGTGGAAGAACATACCTTTGC
ATGAACATACCTTACGCAATGATGTAATGTCTATTCCGCGGATTAAAAAG
AAGCATGTTTTCTTCATATTCAGAATCATTACTGTTCCTGGGAAAAAGGC
ACTTGAATTCCATCTGCCCTAAAGGACTGCCCCTTGCCCAGTAAATGGAA
CGTTCCATTCAAATTTTGTAAATCAGCTGTTTGGCAAGAGGCGGCCAGAA
GGGGACCAGCTGGCCTGTGTTTTCTGGCTGCCATTGTGAATTCTAACCAG
TGAGTGAGACTCAAAAGCTAAGCATATCTCCTGAACTACTGTTTTCAGGT
CACCATGGAGTCCCCCTGAGTCAAGGTACTGATAGCTTTTACATGTATAT
CATTATGTTGCTCTTTTGAGATAGAAACTGCAAGATTTGATACCTGGAGG
AATCATGAAGATCACTATGTCTATAGTCAGTGGTTGGAGCCTTCCAAAGG
TCAGACCCAGTGCACAACACCATCTACACAAGACTGTTATTTGTGACAGG
GCAGAACATGTCACAACTAGGGATGGAAAATCTGCTCAATGCAGACATTT
TAATGTGTGTACATTGAGCTATAAGATATTGTATTTGTACTTTAACTGTA
ACATGTATTATGTATGAAAATGCTTGTTTTTTTGGCATGGCTGGGTCAAT
AGATCAGTAGTTGGGGTAATAATTTGTAGGTCCCCAGTCTGTAGTGTAAA
AGGACAGGTTCAGTCCAAGCTGTGTTTTCATGTCATTTCTGCTGAAAATT
TGCCCTGGGCTTGCTTCAGACAGAAATGATCTGTCAATGATTCAGTGTGT
TTATCACAAATTTGGACAACTGTTGATTTATCAGATGGCAGGCAGCACAA
TTGTTTTTGTATAAGAGGTAAATGCTGACCTATGACCATCAGTTATTTGC
CATCAGACATGTCCTCCTCAATCCTGATAACGTTTTAAATGTCATGACCT
GTGGCACCTCCACAGCCTCTTCTTCATTCATATTCATTCCCCTACCCAGT
TAAAGCCAGCACAGGTAATAGATAGCGTCCATTCCGCCATTTATGATTTC
ACCGGCAAGTGGCGACAGGATGAGCTGTGACACAAAATGGCCTGTTAGGT
AACGGGAAAGCTGTCGTCTGTTGGTGATATAGTCCATTCTGTTCGTTATC
TGTGCTTATCGGTTCTTGGTGTATCAGGAAATCTAGAAATCCTGATTCAT
GTCGCTGCAGGCTGTTACAATGCAGCTTGATCAGCAGCAGTTGAAAGATA
TTGATGTGCATGACTTGACATTTTTGTTCGCCATCAATTGCTCTCTGCTT
AAGTGCATTGTATTCGTACAGATTGCTATTTTGTGTTGATTGACCACACA
ATTTAATTACATCAATGATTCTAAATCATTTTCGATACCTGACTTACAAT
GAAAGATGTTTGCTTGGTGTAGCTAGCCAATATATTTATGCATTTTGCTA
TAACTTGTGCTGATCATCTATTATTAAGTATTTCATAGTTTTTATCATGC
AACTTGTAGCATTGTTACCATGCTCTATTTTAGGATATCCAAATAACATG
TCTTTGCCTCTAGTCAATTTGAAATGTATGGGTTGGGGGGGAGGGGCGTG
CGAGTGTGGGGAGTGGGTTGTCCATCAGCATATCTTGTCTGACTACATGT
GGGCTGTCCTGATCAGCAAAATGCAAATTAGTAATTTTGATATCACTGGA
GAGTTTGACCACTTTGTTATAATTTATGAAATTCTCCGGTAATTGGCTAG
AGGCAAGGATAATCAATATTTGTTTCCCAATGTCTGTCTCTTCAAGATTA
TGTCTGAGGTTCAATATTGTTAAAAGTGATATTTCACTTTCTATGGCAGC
TTTACTTAGTATTTTCATATTCCTTCACTCAGCATCTGATCCATATATAT
GGCCTCCGTCGGTCAGTATTGACCATGGTAAAATCCTAATTCACAACAGT
CCTACAGCATCGACTATGGCTAATCAGCCCTATACGAGAATGGCAGTCTC
TGCCACAAAAATCACATCTGTAAGCTGACTCAGTTCTGTTGCAAAGCTCT
TTTCTGTGGATCTGCTTTTCTGATCCACTGCATAGTTAACCATGTTTGTC
ACAGAAATAACCAACCACTGTTTCTACCTCACACAGAGACTGAGCCTGAC
CTGGCAGGGTCGCTGTCCCCCCCGCGGAACAACGTGCTGTCTCCCACCCG
CTCGTCCTTCCCGAAGCATGTCCATACAGTCATGGACGACAAGTTCAAGG
AGATCGCCAACGACCTGTTCAAGCGAAGTCGCCACGAGTCGGAGACCTTC
CACCCGGACCTCACGGCGCCGTACGAGTACCCCGACCAGTGTCCTCTGGA
GTCGGAGGACGAGAAGAAGAAGCGTCTGGAGCGACAGATGAGCCAGTGCA
ACGATGTTAAGATTAAGTTTAAGTGAGTGGCAGTGCCCTTCCCTGGAGTT
TCACAGGCTGTAGCAAGTTGGATCACTCGTAATGAAGTGGAGAGTAAAAT
TGGAACATTCAAAACAAGAGCATATTAATTATTATACCTAAGAGCCTCCT
TGGTTGAACCCATGAGGGACATGAAATGAAGTGTCTACAATACAAATAAT
TCTAGTCCTAATCCAGGCATGGTGGTACGATGACATGGCATGGGGTGCTA
CCACAAGAAAACAATGGAAGAAGAAAAACCTATTTTACCGTACCACTGCA
CCAAAAATAGGTGACCATTGTTGGAAAGAATTTAGCATCATTTCCTTTGA
ATGACAGGTATTGTACAGGAGGACTCATTATCCTTACAAACAAAGAAATT
CTGTACAACCCTGTCCATTACATGGAAATCAGTTCAATAGCTTTCTCTTG
ACTGAGTCTTACAAAATGAGAGAATATAAAGAAGGAATGATTTTCATTAA
AAAACTACTTGTACATCAGAAGAAAATTTTCTTAATATTTTTAGTGGAAT
TACCCCAAAATAACACATCTTTTTCAAAATTTGTGTTGTTGTGGACATAT
ACATGCAACAGTTTAAGACATTGGGCTAAGCCTGCATTCCTGATAAAGAC
AAATGTGATCTGTTAGCTATGAGTAAACATCATGAGTGTTCCAGCCTTGC
TCAGCCTGACAACCCTGGGCATTGTGACCTGCCTAACCTGTGTGCAGTGC
TGCCTTACACTAACCCTCAGTTTGATGTGTTCTTATCCCTCTCACTATAT
CTTCTCAGCCACTTTACTTGTCGTCCCTAGCAGGTTGGGTTAGGTATAAA
CAAATAGAATCATCAGGACCATGGAAATTTAAAATGCTATAAATTCAAGT
ACATGTACATATATCAAATTTTACCACTCATTTTGACTGGGCTGTCAAAG
ACCTGGTCTTCTTGAAAACAGCCTATTTGTAGTCTAGTCGAAATTTATTC
GGAAAGATAAACAATATTTAGGTTTGAAAAACTTATTTTGGTATCCTCAT
GGAAAATTGCATGAAAAGGACTTTCAGACCAAAAAAAATGTACTGATGTG
TTAAGATAGTGTTAACTTAAACATATGAAATATGAATAATGCATTGCAGA
TTGTACAATCATGTACTACATCGTAATTGTTAATTGTATTAGACAGGATT
GTCATAAATCGCCTAGTAGTACACACGACAAGCTGAAAAAATTTCTGGTG
ACTGAAATTTTCCATGTTGTTTCCCCTACCACTACTTGCATGCCATGATT
TGCTGTGTGCTGTACAGGGGTTTGGATGGAAGGTAAGAAACAGACAGGCA
GATATTGGCATGTCCTAACCAGTCAGTAGGTTCACATTACAGTACTTATG
TTTAGCATTGTTTATTTTTTTGTTTTCATTTATTTTGGCAACACTTCTAA
CAATGCAAGAAGCCACTACATGAATATTCAAAAACTGGACTAACCATATG
CAATGGCCAGACTTTCCACATGTTTGTGTCTGGCATATTGTGACCAGCAG
ATAACCCGTTTTTGTTGGACATACATGCATGTAACACCCTGTGCGTATTT
CGCCATCTTTTTTTTTAAACTAAAAGGTTGAAATTGTGGGCTGAAATTTG
TACAATCATTGACACATGAAGATCTACATTAGTACTGTTTTGTAGCCTTA
TTTTCTTGTTGCTTGCAGAATGGTAGACACATCACCAGTCGTGTAATCAT
ATGTCTGGTGAAATTACTGTGTAGCTGTAGACTCTGATTCAACGAGTACC
ATTGCAAACACCAACATTTCTAATTCTACTACTCTGCATTCCAGTCTATC
ACAAGACTATACAACACTGCATGCTAACCTAAACTCCACTGTACTAAGTC
TTCTTCTTTAGTACTGTAATCTTTGTAGAAATTAATGGTTCCATGCTAGT
GAAAGATGTGCATGATTTTTTTCTTAGTTTTGTTACTACAACTTATTGTA
GATTCTTGTTGCATTCAATGTATGTGAATATTTTTTGGCATACTTCAAAG
GAATGAAAAGGGAAGTGATGAGACTTTAAGCTTTGAAATTAACATGAGTT
ATCTAACATATATTTGCCATGAATTATGAACTCATCATCACAATTCACCT
TACAAACCACCATGTTACAAATCATAACACATCTTTCATAGCATGACCAA
TATAGCAGTTTTGAAGCGTCAAGTCATCATCGGATGGAATGCCCATGACG
AGGTGACGATGAACGCTGGTTTGACGTGATGCTTGTTTCTTTAGTTGTGT
GGACTAACTTTGCGGTGTGTTTTCCTCCTCCTATCACTCCCCCTCCCCTC
CTCAACATCTGAAGGTACGACAATAATGACAGGGAAGCTAGAACTACCCG
CAAACTGAAACTCAAAGATTTACAAGAGTGAGTGCCTGATTCCTTATCAT
AGAGGACAGATAATTAGAATACTTTTACAGGTAATGAAAGATCTGAAGAA
GTAACATATAGATAACTCTTCTAATGCAACTGAAGTCTATTTATACATTT
TTAAGTTATACTTTACTAGGTACAGTTAGATTTTCAGTCTAACATATTAT
CTATGTTCTTATCAATGCTTACATCAGGGAGCAGATGTACAAGTCCACTA
ATGCTTTTGTTATAATAGAGACTTGTCCTGGTGACAATCCCATGCAAAAC
TAATGCTACATATGTATAAACAAATGATTATGAATGGACAGGATTATACT
ATGGGGCCTGGCTAGATTTCTAGAAAGAAGGTTTCTGTTTTCCTCATCAA
AGCCTACCTCTTCCATTTTTGTGCCCTTTTTAGATTTTGCCTTTTTCTCA
AATTGCAGATAATCTGTGCTAATATTAAGTCTGAATCATAGTAAAATAAA
TCTGTTAAAATAGACAGGCACCAATGGATACAAACCAAAATGGGGCCACC
TAACCAAAGATGTAATCAATTATTTGATACCTTATTAAGTTATCTATTTC
ATACTTATTCATGTGCACACCTTGTAATCTGGAGAAATTATTCCATACTT
TTAGAACGACCATGTGCATAAAAAAGGGCCAATTTCCTATAATTGCATGT
TCTGCATGTTACCATGGTGTTCCATATGGAGCAGAAGGAAGCACAGTACT
TGTGGGAAAGACTGTATCTGCTCGCCCGCCTTTTCTATAGAAACAGTAAC
ATATGGTCTGGTATTTTAGAATCTGCTGTCACGGTACAGTCATTGCAAAT
CAAGCGCATCAACATCTTAAAAATCTTAACATGTTGAAAATCATGTGTCT
GTGACAGAGACACTGCAAACATTTAGTGATTATTTAAAATGACCAGTTTC
ATAATGTTCTAGACATTTTGTAATTTGAGCCATACCTTTACAACCCGGCC
CAACTTATGAATATGTCTACGGAGTTTCATAGATTCTTATTGGATCCAGC
CATCTGACACCTGTTTTTTTAGACCAATGTTGAAACAGATTATTGAAGGT
CAGGTACCTCCTAGATGCTGAGAACCTAACCACATGTAAAATTGCATGCA
AAAAGTGCTAACCCAGCTTGTACACTAGAGGTGAAATTTGTTTGGTTACT
AAATTTTTGAATTTTTCTGCGTATGTGGTACATGTAGTGTTATAGGAATG
TTTAGTATGAGCTGCTATTTCAGTTCTAACGTAACTATGGATTGTGTACA
TGAATAAGTGCCCTTTGTTGCTTTCACCCAAAGGGCATTTGGCATTAGTT
GTGCACTTTATGAGTTATACCTGGGTCTCTGTAGTGGCCAGGTAAGCCCA
TAATACCTGGTACTGCACCTGGCGAATCACTTAAAGTGACAGTGATCAGT
GCAGCCATTAACACCCCAGAGTCTCCCAGTAAGCTATCTGTGCACGTTAG
TCCCAATGGAGCTGACAGTAATTCTTTCATTTTGAAACACAAAGTGGTTT
TCCATCCCATCTAGAGCCTTCAGTAATGTTATGCACATTTGTACTGTATA
GGCAACTGGAGAGGCAAACATCAAATGCAAAAGTCTTTGGAAGTTTAACT
GTCACTTGTACTGTGTCTATTAGTACAATTATGTAAATACTGCTCTTCCA
GATAAGGCTATTGTAAATACAAAATGGTGCTCAGTTGTTCATAAAATCTG
GTAGATTGACATATTTAGCCCGCATGTACAGTATACGCTGCAGTCAGGTA
GTTAAGCAAGCATTCACACCCATCCCCTTGTTGTGACAACACTTCCATAT
TGAAAAGTGTGCATTTAAAAATCAATCCTTCTTGACCGTATTGTTCCCAC
CAGGCACCAACAGAATGTGAAATCCCCAACGTTCTTTGGGGCCACCTTGA
CGCCCGCAGAATTCACAAAGGAAGAGGAGGAGGTGTTGGGACAGTTCCAG
AGAGTGTCCATCACTGGGGATGAAACCACTGGGGCAAGTCTTCTCATTGG
GAGTTTGAAC Coding sequence (CDS) from alignment at Sc0000229:265884..274493- >BlTCONS00113570 ID=BlTCONS00113570|Name=BlTCONS00113570|organism=Branchiostoma lanceolatum|type=CDS|length=456bp|location=Sequence derived from alignment at Sc0000229:265884..274493- (Branchiostoma lanceolatum)
ATGCCAACATCTGAGACTGAGCCTGACCTGGCAGGGTCGCTGTCCCCCCC
GCGGAACAACGTGCTGTCTCCCACCCGCTCGTCCTTCCCGAAGCATGTCC
ATACAGTCATGGACGACAAGTTCAAGGAGATCGCCAACGACCTGTTCAAG
CGAAGTCGCCACGAGTCGGAGACCTTCCACCCGGACCTCACGGCGCCGTA
CGAGTACCCCGACCAGTGTCCTCTGGAGTCGGAGGACGAGAAGAAGAAGC
GTCTGGAGCGACAGATGAGCCAGTGCAACGATGTTAAGATTAAGTTTAAG
CACCAACAGAATGTGAAATCCCCAACGTTCTTTGGGGCCACCTTGACGCC
CGCAGAATTCACAAAGGAAGAGGAGGAGGTGTTGGGACAGTTCCAGAGAG
TGTCCATCACTGGGGATGAAACCACTGGGGCAAGTCTTCTCATTGGGAGT
TTGAAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113570-exon-Sc0000229-1564993656:274282..274493 | BlTCONS00113570-exon-Sc0000229-1564993656:274282..274493 | Branchiostoma lanceolatum | exon |
| BlTCONS00113570-exon-Sc0000229-1564993656:270322..270607 | BlTCONS00113570-exon-Sc0000229-1564993656:270322..270607 | Branchiostoma lanceolatum | exon |
| BlTCONS00113570-exon-Sc0000229-1564993656:265884..266040 | BlTCONS00113570-exon-Sc0000229-1564993656:265884..266040 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000229 | genome | Sc0000229:265884..274493 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055717 |
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