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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000229:265884..272534- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113566 ID=BlTCONS00113566|Name=BlTCONS00113566|organism=Branchiostoma lanceolatum|type=mRNA|length=6651bp|location=Sequence derived from alignment at Sc0000229:265884..272534- (Branchiostoma lanceolatum)
CTGGCCTGTGTTTTCTGGCTGCCATTGTGAATTCTAACCAGTGAGTGAGA
CTCAAAAGCTAAGCATATCTCCTGAACTACTGTTTTCAGGTCACCATGGA
GTCCCCCTGAGTCAAGGTACTGATAGCTTTTACATGTATATCATTATGTT
GCTCTTTTGAGATAGAAACTGCAAGATTTGATACCTGGAGGAATCATGAA
GATCACTATGTCTATAGTCAGTGGTTGGAGCCTTCCAAAGGTCAGACCCA
GTGCACAACACCATCTACACAAGACTGTTATTTGTGACAGGGCAGAACAT
GTCACAACTAGGGATGGAAAATCTGCTCAATGCAGACATTTTAATGTGTG
TACATTGAGCTATAAGATATTGTATTTGTACTTTAACTGTAACATGTATT
ATGTATGAAAATGCTTGTTTTTTTGGCATGGCTGGGTCAATAGATCAGTA
GTTGGGGTAATAATTTGTAGGTCCCCAGTCTGTAGTGTAAAAGGACAGGT
TCAGTCCAAGCTGTGTTTTCATGTCATTTCTGCTGAAAATTTGCCCTGGG
CTTGCTTCAGACAGAAATGATCTGTCAATGATTCAGTGTGTTTATCACAA
ATTTGGACAACTGTTGATTTATCAGATGGCAGGCAGCACAATTGTTTTTG
TATAAGAGGTAAATGCTGACCTATGACCATCAGTTATTTGCCATCAGACA
TGTCCTCCTCAATCCTGATAACGTTTTAAATGTCATGACCTGTGGCACCT
CCACAGCCTCTTCTTCATTCATATTCATTCCCCTACCCAGTTAAAGCCAG
CACAGGTAATAGATAGCGTCCATTCCGCCATTTATGATTTCACCGGCAAG
TGGCGACAGGATGAGCTGTGACACAAAATGGCCTGTTAGGTAACGGGAAA
GCTGTCGTCTGTTGGTGATATAGTCCATTCTGTTCGTTATCTGTGCTTAT
CGGTTCTTGGTGTATCAGGAAATCTAGAAATCCTGATTCATGTCGCTGCA
GGCTGTTACAATGCAGCTTGATCAGCAGCAGTTGAAAGATATTGATGTGC
ATGACTTGACATTTTTGTTCGCCATCAATTGCTCTCTGCTTAAGTGCATT
GTATTCGTACAGATTGCTATTTTGTGTTGATTGACCACACAATTTAATTA
CATCAATGATTCTAAATCATTTTCGATACCTGACTTACAATGAAAGATGT
TTGCTTGGTGTAGCTAGCCAATATATTTATGCATTTTGCTATAACTTGTG
CTGATCATCTATTATTAAGTATTTCATAGTTTTTATCATGCAACTTGTAG
CATTGTTACCATGCTCTATTTTAGGATATCCAAATAACATGTCTTTGCCT
CTAGTCAATTTGAAATGTATGGGTTGGGGGGGAGGGGCGTGCGAGTGTGG
GGAGTGGGTTGTCCATCAGCATATCTTGTCTGACTACATGTGGGCTGTCC
TGATCAGCAAAATGCAAATTAGTAATTTTGATATCACTGGAGAGTTTGAC
CACTTTGTTATAATTTATGAAATTCTCCGGTAATTGGCTAGAGGCAAGGA
TAATCAATATTTGTTTCCCAATGTCTGTCTCTTCAAGATTATGTCTGAGG
TTCAATATTGTTAAAAGTGATATTTCACTTTCTATGGCAGCTTTACTTAG
TATTTTCATATTCCTTCACTCAGCATCTGATCCATATATATGGCCTCCGT
CGGTCAGTATTGACCATGGTAAAATCCTAATTCACAACAGTCCTACAGCA
TCGACTATGGCTAATCAGCCCTATACGAGAATGGCAGTCTCTGCCACAAA
AATCACATCTGTAAGCTGACTCAGTTCTGTTGCAAAGCTCTTTTCTGTGG
ATCTGCTTTTCTGATCCACTGCATAGTTAACCATGTTTGTCACAGAAATA
ACCAACCACTGTTTCTACCTCACACAGAGACTGAGCCTGACCTGGCAGGG
TCGCTGTCCCCCCCGCGGAACAACGTGCTGTCTCCCACCCGCTCGTCCTT
CCCGAAGCATGTCCATACAGTCATGGACGACAAGTTCAAGGAGATCGCCA
ACGACCTGTTCAAGCGAAGTCGCCACGAGTCGGAGACCTTCCACCCGGAC
CTCACGGCGCCGTACGAGTACCCCGACCAGTGTCCTCTGGAGTCGGAGGA
CGAGAAGAAGAAGCGTCTGGAGCGACAGATGAGCCAGTGCAACGATGTTA
AGATTAAGTTTAAGTGAGTGGCAGTGCCCTTCCCTGGAGTTTCACAGGCT
GTAGCAAGTTGGATCACTCGTAATGAAGTGGAGAGTAAAATTGGAACATT
CAAAACAAGAGCATATTAATTATTATACCTAAGAGCCTCCTTGGTTGAAC
CCATGAGGGACATGAAATGAAGTGTCTACAATACAAATAATTCTAGTCCT
AATCCAGGCATGGTGGTACGATGACATGGCATGGGGTGCTACCACAAGAA
AACAATGGAAGAAGAAAAACCTATTTTACCGTACCACTGCACCAAAAATA
GGTGACCATTGTTGGAAAGAATTTAGCATCATTTCCTTTGAATGACAGGT
ATTGTACAGGAGGACTCATTATCCTTACAAACAAAGAAATTCTGTACAAC
CCTGTCCATTACATGGAAATCAGTTCAATAGCTTTCTCTTGACTGAGTCT
TACAAAATGAGAGAATATAAAGAAGGAATGATTTTCATTAAAAAACTACT
TGTACATCAGAAGAAAATTTTCTTAATATTTTTAGTGGAATTACCCCAAA
ATAACACATCTTTTTCAAAATTTGTGTTGTTGTGGACATATACATGCAAC
AGTTTAAGACATTGGGCTAAGCCTGCATTCCTGATAAAGACAAATGTGAT
CTGTTAGCTATGAGTAAACATCATGAGTGTTCCAGCCTTGCTCAGCCTGA
CAACCCTGGGCATTGTGACCTGCCTAACCTGTGTGCAGTGCTGCCTTACA
CTAACCCTCAGTTTGATGTGTTCTTATCCCTCTCACTATATCTTCTCAGC
CACTTTACTTGTCGTCCCTAGCAGGTTGGGTTAGGTATAAACAAATAGAA
TCATCAGGACCATGGAAATTTAAAATGCTATAAATTCAAGTACATGTACA
TATATCAAATTTTACCACTCATTTTGACTGGGCTGTCAAAGACCTGGTCT
TCTTGAAAACAGCCTATTTGTAGTCTAGTCGAAATTTATTCGGAAAGATA
AACAATATTTAGGTTTGAAAAACTTATTTTGGTATCCTCATGGAAAATTG
CATGAAAAGGACTTTCAGACCAAAAAAAATGTACTGATGTGTTAAGATAG
TGTTAACTTAAACATATGAAATATGAATAATGCATTGCAGATTGTACAAT
CATGTACTACATCGTAATTGTTAATTGTATTAGACAGGATTGTCATAAAT
CGCCTAGTAGTACACACGACAAGCTGAAAAAATTTCTGGTGACTGAAATT
TTCCATGTTGTTTCCCCTACCACTACTTGCATGCCATGATTTGCTGTGTG
CTGTACAGGGGTTTGGATGGAAGGTAAGAAACAGACAGGCAGATATTGGC
ATGTCCTAACCAGTCAGTAGGTTCACATTACAGTACTTATGTTTAGCATT
GTTTATTTTTTTGTTTTCATTTATTTTGGCAACACTTCTAACAATGCAAG
AAGCCACTACATGAATATTCAAAAACTGGACTAACCATATGCAATGGCCA
GACTTTCCACATGTTTGTGTCTGGCATATTGTGACCAGCAGATAACCCGT
TTTTGTTGGACATACATGCATGTAACACCCTGTGCGTATTTCGCCATCTT
TTTTTTTAAACTAAAAGGTTGAAATTGTGGGCTGAAATTTGTACAATCAT
TGACACATGAAGATCTACATTAGTACTGTTTTGTAGCCTTATTTTCTTGT
TGCTTGCAGAATGGTAGACACATCACCAGTCGTGTAATCATATGTCTGGT
GAAATTACTGTGTAGCTGTAGACTCTGATTCAACGAGTACCATTGCAAAC
ACCAACATTTCTAATTCTACTACTCTGCATTCCAGTCTATCACAAGACTA
TACAACACTGCATGCTAACCTAAACTCCACTGTACTAAGTCTTCTTCTTT
AGTACTGTAATCTTTGTAGAAATTAATGGTTCCATGCTAGTGAAAGATGT
GCATGATTTTTTTCTTAGTTTTGTTACTACAACTTATTGTAGATTCTTGT
TGCATTCAATGTATGTGAATATTTTTTGGCATACTTCAAAGGAATGAAAA
GGGAAGTGATGAGACTTTAAGCTTTGAAATTAACATGAGTTATCTAACAT
ATATTTGCCATGAATTATGAACTCATCATCACAATTCACCTTACAAACCA
CCATGTTACAAATCATAACACATCTTTCATAGCATGACCAATATAGCAGT
TTTGAAGCGTCAAGTCATCATCGGATGGAATGCCCATGACGAGGTGACGA
TGAACGCTGGTTTGACGTGATGCTTGTTTCTTTAGTTGTGTGGACTAACT
TTGCGGTGTGTTTTCCTCCTCCTATCACTCCCCCTCCCCTCCTCAACATC
TGAAGGTACGACAATAATGACAGGGAAGCTAGAACTACCCGCAAACTGAA
ACTCAAAGATTTACAAGAGTGAGTGCCTGATTCCTTATCATAGAGGACAG
ATAATTAGAATACTTTTACAGGTAATGAAAGATCTGAAGAAGTAACATAT
AGATAACTCTTCTAATGCAACTGAAGTCTATTTATACATTTTTAAGTTAT
ACTTTACTAGGTACAGTTAGATTTTCAGTCTAACATATTATCTATGTTCT
TATCAATGCTTACATCAGGGAGCAGATGTACAAGTCCACTAATGCTTTTG
TTATAATAGAGACTTGTCCTGGTGACAATCCCATGCAAAACTAATGCTAC
ATATGTATAAACAAATGATTATGAATGGACAGGATTATACTATGGGGCCT
GGCTAGATTTCTAGAAAGAAGGTTTCTGTTTTCCTCATCAAAGCCTACCT
CTTCCATTTTTGTGCCCTTTTTAGATTTTGCCTTTTTCTCAAATTGCAGA
TAATCTGTGCTAATATTAAGTCTGAATCATAGTAAAATAAATCTGTTAAA
ATAGACAGGCACCAATGGATACAAACCAAAATGGGGCCACCTAACCAAAG
ATGTAATCAATTATTTGATACCTTATTAAGTTATCTATTTCATACTTATT
CATGTGCACACCTTGTAATCTGGAGAAATTATTCCATACTTTTAGAACGA
CCATGTGCATAAAAAAGGGCCAATTTCCTATAATTGCATGTTCTGCATGT
TACCATGGTGTTCCATATGGAGCAGAAGGAAGCACAGTACTTGTGGGAAA
GACTGTATCTGCTCGCCCGCCTTTTCTATAGAAACAGTAACATATGGTCT
GGTATTTTAGAATCTGCTGTCACGGTACAGTCATTGCAAATCAAGCGCAT
CAACATCTTAAAAATCTTAACATGTTGAAAATCATGTGTCTGTGACAGAG
ACACTGCAAACATTTAGTGATTATTTAAAATGACCAGTTTCATAATGTTC
TAGACATTTTGTAATTTGAGCCATACCTTTACAACCCGGCCCAACTTATG
AATATGTCTACGGAGTTTCATAGATTCTTATTGGATCCAGCCATCTGACA
CCTGTTTTTTTAGACCAATGTTGAAACAGATTATTGAAGGTCAGGTACCT
CCTAGATGCTGAGAACCTAACCACATGTAAAATTGCATGCAAAAAGTGCT
AACCCAGCTTGTACACTAGAGGTGAAATTTGTTTGGTTACTAAATTTTTG
AATTTTTCTGCGTATGTGGTACATGTAGTGTTATAGGAATGTTTAGTATG
AGCTGCTATTTCAGTTCTAACGTAACTATGGATTGTGTACATGAATAAGT
GCCCTTTGTTGCTTTCACCCAAAGGGCATTTGGCATTAGTTGTGCACTTT
ATGAGTTATACCTGGGTCTCTGTAGTGGCCAGGTAAGCCCATAATACCTG
GTACTGCACCTGGCGAATCACTTAAAGTGACAGTGATCAGTGCAGCCATT
AACACCCCAGAGTCTCCCAGTAAGCTATCTGTGCACGTTAGTCCCAATGG
AGCTGACAGTAATTCTTTCATTTTGAAACACAAAGTGGTTTTCCATCCCA
TCTAGAGCCTTCAGTAATGTTATGCACATTTGTACTGTATAGGCAACTGG
AGAGGCAAACATCAAATGCAAAAGTCTTTGGAAGTTTAACTGTCACTTGT
ACTGTGTCTATTAGTACAATTATGTAAATACTGCTCTTCCAGATAAGGCT
ATTGTAAATACAAAATGGTGCTCAGTTGTTCATAAAATCTGGTAGATTGA
CATATTTAGCCCGCATGTACAGTATACGCTGCAGTCAGGTAGTTAAGCAA
GCATTCACACCCATCCCCTTGTTGTGACAACACTTCCATATTGAAAAGTG
TGCATTTAAAAATCAATCCTTCTTGACCGTATTGTTCCCACCAGGCACCA
ACAGAATGTGAAATCCCCAACGTTCTTTGGGGCCACCTTGACGCCCGCAG
AATTCACAAAGGAAGAGGAGGAGGTGTTGGGACAGTTCCAGAGAGTGTCC
ATCACTGGGGATGAAACCACTGGGGCAAGTCTTCTCATTGGGAGTTTGAA
C Coding sequence (CDS) from alignment at Sc0000229:265884..272534- >BlTCONS00113566 ID=BlTCONS00113566|Name=BlTCONS00113566|organism=Branchiostoma lanceolatum|type=CDS|length=411bp|location=Sequence derived from alignment at Sc0000229:265884..272534- (Branchiostoma lanceolatum)
ATGGACGACAAGTTCAAGGAGATCGCCAACGACCTGTTCAAGCGAAGTCG
CCACGAGTCGGAGACCTTCCACCCGGACCTCACGGCGCCGTACGAGTACC
CCGACCAGTGTCCTCTGGAGTCGGAGGACGAGAAGAAGAAGCGTCTGGAG
CGACAGATGAGCCAGTGCAACGATGTTAAGATTAAGTTTAAGTACGACAA
TAATGACAGGGAAGCTAGAACTACCCGCAAACTGAAACTCAAAGATTTAC
AAGAGCACCAACAGAATGTGAAATCCCCAACGTTCTTTGGGGCCACCTTG
ACGCCCGCAGAATTCACAAAGGAAGAGGAGGAGGTGTTGGGACAGTTCCA
GAGAGTGTCCATCACTGGGGATGAAACCACTGGGGCAAGTCTTCTCATTG
GGAGTTTGAAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113566-exon-Sc0000229-1564993656:272419..272534 | BlTCONS00113566-exon-Sc0000229-1564993656:272419..272534 | Branchiostoma lanceolatum | exon |
| BlTCONS00113566-exon-Sc0000229-1564993656:270322..270607 | BlTCONS00113566-exon-Sc0000229-1564993656:270322..270607 | Branchiostoma lanceolatum | exon |
| BlTCONS00113566-exon-Sc0000229-1564993656:267917..267979 | BlTCONS00113566-exon-Sc0000229-1564993656:267917..267979 | Branchiostoma lanceolatum | exon |
| BlTCONS00113566-exon-Sc0000229-1564993656:265884..266040 | BlTCONS00113566-exon-Sc0000229-1564993656:265884..266040 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000229 | genome | Sc0000229:265884..272534 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055717 |
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