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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000229:261745..265431- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113565 ID=BlTCONS00113565|Name=BlTCONS00113565|organism=Branchiostoma lanceolatum|type=mRNA|length=3687bp|location=Sequence derived from alignment at Sc0000229:261745..265431- (Branchiostoma lanceolatum)
CGCAGCCTCCAGTATGAACCAGAAACACCTGCTGCGGTTTATCAAGAGTA
AGCTCAGGAAGCATGCCGATGAGGTGGTCATCAAGAACGGAGGCAAGGAA
CAGACCCTGAAGGAGGTGGGCATCATTTTTTATCTGCACTGTTCTGTACA
AATTACATGTAAATAAGGTACATGTTATAACCTAGTGATTTGTGCAGTTG
GTATAGTGGAAATCATACTTCTCTTAGGACTTTTTATGCAGAATGGAAAA
AAATGGAAAAGTTCTCCTAGTTTTGTCAGAAAATCGTTGTTGCACTGTTT
GTTATATGTAATGTTGAACTATTTGTAATGTCTCATTCCCTCCTGTTGTA
GGTGTTTGAGAACCTGAACCTGACAGCCTATGAGCTGAATGTGGACTCAC
TGGATGTCCATGCTGTAAGTAGGACCTAGTTTCTGTGGTACCTTGACAGG
GGTTTTGTTTACAGCTGTTGAACAGTTGATTAATGAAAAAAAACAGATGA
TTGTAAAAATGCAATGAAGCTGATAAATTCCATCAGATTACAACATGTAC
CTGTTATTTGAAATTCACCTTTCTTGGATCAGAATTTTTTGCGTCTTTAT
TATTATGATTTTATTGATTTTTTTCACTCAAGTGACACATTAAACGAAAC
TTGAGGATACGTTTTATGAAAATATGCCAAAGTAAAATTACAATTTCTTA
TTACCAGTAGTCCTAGAAAGTTTCTTATTGTGTATAGATGATGTTTCTAT
TAAAGTGACACAATGTCCTTGCATGTGGTAATGTCTGTCCACCTTGACTC
CTGACAGGATCGTAACACATTCCACCGGTTTGACAAGTTCAACCACAAGT
ACAACCCCATGGGGCAGAGCGTGCTGAGGGAGATCTTCCTCAAGACTGAC
AACTACTTAGGTGGAAAGTACTTTGCTGAACTCATGAAGGTACAGTACAT
GTACTGTACTTCAAAGGTCCTGAGTCATCAAGTTTTCTGTTTGTGCTATA
TTTGTATTGTAGAATGAAAAAAGACCAAAATGTAAACTAAGAATACACAA
AGCCAAAAATAATCTGTTTTAATTGATATGTTTAAAGAGGCTTTAGGTGC
CTTCATCATACGATATTGGCATGCTTTAAATGCATTTAAGTTCACGGTGA
TTTGATTTCGCGGTATGGAGAATATGGAGTGTTCGCAGCGGTATTTAGCT
CACGGTTGAAGCAAGGTGGTAGGCAGGAAGAAGACAGAACAAGCATTTTT
TGCTTACCGTGAAAGCTGTGAACATGAAACCTCTACAAAATTAAATGCAC
TTACAGTAACTCATTAGCTGGTCAGCTGTGGGAAGATTGGGAGAGTTAGA
AATTGCACCAGCCTTACAAGGATAGACACTTTCTAATCTTTTGAACAATA
AAAGTGTTCACGGTGGTCTCTAGTTAGTTCGCGGTTTAAACAAGTCGGTA
GACAGGAAGAAGACAGAGCAAGTATGTTTGTGGTGTTTTAAGTTCGAAAT
GAAAGGCTTCCCAAGGAAACACGTGAACATGAAGCCACTGCAAAATCAAA
TACATTTTACACTAAGTAACTCATTAGCTGGTCAGCTGTGGGAAGGTTGG
GAAAGTTAGAAATTGCCCCNTGTGGGAAGATTGGGAAAGTTAGAAATTGC
CCCAGCCTTACAAGGATGCAGGTTTTTCTCTTCCTAATCTTTTGAACAAT
TTTGACCAAGTTGTGATTATCCCCATCAGGAAGTGATGGAGGACCTGGAG
GAGAGTAAATACCAGTTTGCTGAGCTGCGTCTGTCCGTCTACGGCCGGTC
CTACGACGAGTGGGACAAGCTGGCAAAGTGGGCGGTCAAGCACAACGTCT
ACTCCGACAACGTTCGCTGGCTCATTCAGATCCCACGGCTCTAGTAAGTG
CAGGGACATGAAAAAAATTTGGTGCAGAATAGAGTCCATTCCAAGTCACC
ACAAGGGTTGTTATTGTCCTAATTTACAAATGTTTTCAATCTATTGTAAT
TATTTGAGTGAGAGATTTTATACTTAAGAAATATTTTGAATGTGATTTCA
ACTTTATAAATATTTCTCCGGTTTTCTAAAACTTCAGAAATATTCAAAAG
CACCTACTTTTATGGGGGCAATGACCATTCTACCATTCTTAACCATTTTC
TACCATTTTTTGTAAATATTTCTAAAAGTGAAAGAATCACATAGATGTTT
AGAAATTATTCTAAATAAAGAGATTTTTTTGCAGTTACTTTCAAAATATT
TCTAAATTATCTAATTGAATTCAAATAAATTCATATTTCTATATTCAATC
TTTCAGAAAAATTTATAACTATTCTAAGACAGATATTCTTTTATTAGAAT
TTTTTCTAAATTATTTCAAATATTAGTATAAAACCCTCTTGGTCACTTGG
AATGGACTCTACTTAGAAACATTTTAGAATCTAGCTGTTGCTTTGATCAT
TTGGTATTCCAGAGGAAGGATTCGATTTTTAGTTTTTTTTAAGGTCTTTA
AAACAAATACTGGTACTCTCCCTTCCATTCCAGTAGCTTCAGACTATATG
TATATGCACTTGATGACAAAGTGAAATTAGTTAACATGTACATGTAGTAG
CTGTGTTGTATTCTGCCCTTCTGTTCTTATGTATCTTTTTCTTTTCATTT
GAGTTTTCTAATCTTTATACTCTATTGCTTACAGATGTATTTGGTGATGT
TACTGTTTTGTGGAGGGCATGTTGGAGAGTCCATTGCATGCAAGTCATGG
ATTTAAGGTTTTTGTGTTGATAACTGTCTTACGTTATTGTGTGTATGTTT
TATGTTGCTATATACTCCATCGATGTTCACTGTTGCTTTCTATGTCTGTT
CCCAGTGATGTGTACCGGAGTAAGGGCACCCTCAGTAACTTCCAGGAGGT
GCTACAGAACATCTACATGCCACTGATTGAAGCCACTGTTGACCCACAGA
GCCACCCTGAGCTTCACGCCTTCCTGAAATACGTGAGTGGAAAACATGTG
TTCTTACTCGGTTCTCCAAGTTTTGTGAACAATCTTGAACTTCACAAGTG
TTTTGGTATTGGAAGGAGTAGCCCATCCCTCTCCTTCCACCACCTTTTAC
CTCCCCAACCAAAGGTTCCCATTTTACACCTGGGTGGAGTGAGGAAAGTT
GTGTAAAGTGCCTTTTCCAATGGCTCAACTTTGCTGGCATGTCGGGATTT
AAACCCCAGGACCCCTGGGTTCTGGACCAAACACCCTAACTGTTGCACCA
ACATGATGCCACAAAAATGTGGCATAGCTCTGTATGCCTGTAGCTCAGTA
TGATTGATGTTTTGTATCCTGTTGTTGTGCAGATAATAGGGTTTGACAGT
GTGGATGATGAGTCCAAGCCGGAGAGACACATGTTCACCATGGACAGCCC
CCTGCCTGCAGAGTGGACTGATGAGGAGAACCCACCGTATGCCTACTACC
TCTACTACATGTACGCCAACATGGTCATCCTCAACCATCTGCGAAGGTAC
CTTTTTTTTTCCCCTGTCAATTTTGATTGTGTGAAGTTTTAATTTCCTTT
GCATTTTAAATTTTTGAAGCTGAAGGGAAAAGTGAAAACTACAAGAGTTA
AGAAAAATGTAGGAAGGTCTGATGAGTCAATACCTGGAAGTAGTACTAGT
AGTGAGGACCTGTTCCTTTTGTGTTGTGTTCAGGGAG Coding sequence (CDS) from alignment at Sc0000229:261745..265431- >BlTCONS00113565 ID=BlTCONS00113565|Name=BlTCONS00113565|organism=Branchiostoma lanceolatum|type=CDS|length=768bp|location=Sequence derived from alignment at Sc0000229:261745..265431- (Branchiostoma lanceolatum)
GCAGCCTCCAGTATGAACCAGAAACACCTGCTGCGGTTTATCAAGAGTAA
GCTCAGGAAGCATGCCGATGAGGTGGTCATCAAGAACGGAGGCAAGGAAC
AGACCCTGAAGGAGGTGTTTGAGAACCTGAACCTGACAGCCTATGAGCTG
AATGTGGACTCACTGGATGTCCATGCTGATCGTAACACATTCCACCGGTT
TGACAAGTTCAACCACAAGTACAACCCCATGGGGCAGAGCGTGCTGAGGG
AGATCTTCCTCAAGACTGACAACTACTTAGGTGGAAAGTACTTTGCTGAA
CTCATGAAGGAAGTGATGGAGGACCTGGAGGAGAGTAAATACCAGTTTGC
TGAGCTGCGTCTGTCCGTCTACGGCCGGTCCTACGACGAGTGGGACAAGC
TGGCAAAGTGGGCGGTCAAGCACAACGTCTACTCCGACAACGTTCGCTGG
CTCATTCAGATCCCACGGCTCTATGATGTGTACCGGAGTAAGGGCACCCT
CAGTAACTTCCAGGAGGTGCTACAGAACATCTACATGCCACTGATTGAAG
CCACTGTTGACCCACAGAGCCACCCTGAGCTTCACGCCTTCCTGAAATAC
ATAATAGGGTTTGACAGTGTGGATGATGAGTCCAAGCCGGAGAGACACAT
GTTCACCATGGACAGCCCCCTGCCTGCAGAGTGGACTGATGAGGAGAACC
CACCGTATGCCTACTACCTCTACTACATGTACGCCAACATGGTCATCCTC
AACCATCTGCGAAGGGGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113565-exon-Sc0000229-1564993656:265317..265431 | BlTCONS00113565-exon-Sc0000229-1564993656:265317..265431 | Branchiostoma lanceolatum | exon |
| BlTCONS00113565-exon-Sc0000229-1564993656:265018..265080 | BlTCONS00113565-exon-Sc0000229-1564993656:265018..265080 | Branchiostoma lanceolatum | exon |
| BlTCONS00113565-exon-Sc0000229-1564993656:264493..264624 | BlTCONS00113565-exon-Sc0000229-1564993656:264493..264624 | Branchiostoma lanceolatum | exon |
| BlTCONS00113565-exon-Sc0000229-1564993656:263539..263702 | BlTCONS00113565-exon-Sc0000229-1564993656:263539..263702 | Branchiostoma lanceolatum | exon |
| BlTCONS00113565-exon-Sc0000229-1564993656:262450..262576 | BlTCONS00113565-exon-Sc0000229-1564993656:262450..262576 | Branchiostoma lanceolatum | exon |
| BlTCONS00113565-exon-Sc0000229-1564993656:261935..262099 | BlTCONS00113565-exon-Sc0000229-1564993656:261935..262099 | Branchiostoma lanceolatum | exon |
| BlTCONS00113565-exon-Sc0000229-1564993656:261745..261748 | BlTCONS00113565-exon-Sc0000229-1564993656:261745..261748 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000229 | genome | Sc0000229:261745..265431 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055716 |
|
