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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000229:238628..243293- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113560 ID=BlTCONS00113560|Name=BlTCONS00113560|organism=Branchiostoma lanceolatum|type=mRNA|length=4666bp|location=Sequence derived from alignment at Sc0000229:238628..243293- (Branchiostoma lanceolatum)
AGCTGGTTTACTTTCAGGAGCAGCTGTTTTCTCTTCGGTAGTTGAATCCG
CCCTTACAGCCGCCATCTTACCGGCGGGTGAGTCCATGGTGACCAGGGGG
TGCGATCATCCAAGGTTATGAACTAGAATACCGCGCTTTGAATGAATCTA
TGTGTAATACCTGACNTGCGATTATCTACTGTTATGAACTACAATACCGC
GCCTTGAATGCATCTATGTGTAATACCTGAAGTGATATGACATCAAAATT
GTATGATATTTTCCAAAAAATCAAACATTAATCATTTCATTTCGGTTCCA
ATAAGGTTTTAGCTTCAAACCATTGCCATAATGGTATAGTCTATAGGGCC
TTGAACTCGACAGTGGATTCGAATCGTCTGTTGTCGAATATATCTCCCAT
TTTGGGGACTTACATTAGTGGATAGGGAGTCTTGTATCATACCAAGGTGG
TTTCAAAAGACTCAGACGTCAGAGTCTATGCTGCGAGCAGATTTGGATGA
ATCTTCAGATTTAAGTATCTTCAGATTTGGATGTATCTTTAGATGTCATA
ACTCTAGGTATATAACATTACTTGCCCCGTCCCCCCCCGGGGGTCGACCG
ATGATGATGATGATGATGATGATGATGATAACATTACATTAAAATTTACG
TTGATGAAGGTTAGTCACTGACGAAGGACAGCGGATGCTGTCTGAAACGT
CTGACTGTTTCAAAATTTTATCCAGTTGCTTGAGTAACTATTTTTGGCTC
ACATTAAAACTGCTTTGTTGTGAGATAAGATACCCACGATTTGCCCACCT
GATTGTAACGTTAAGTTAAACGTTTGTTCAGATATTTCAAAGATTAACAG
ATATACATATGTCAGCCTTTAATGTTTAGTGATCATAATCTAAATGTTTC
GTTTTTCTATTTTACAATTTGCAGTTGACCGTACGAAAGTCACTGGGTCA
CCTATTAAATGTCAATAGTGTGACAGTGGGCTGAGCGTAAATCAACTTGA
TTTCTTTAAAGTTAATGCATGTATGTCATATTTTTTATCACTACGTTTAA
CGTAACGTTAAGATTGGAGGGTTTATCTAAATCCTAAATATATTTGGTAC
TTGGTGGGTCCCACATTGTTTGATTAAGGAGGTAACGTTAACCGTTCAAC
GCGTACTAGGTTCAAAAGTTCCTTGCGTATTCAACAAGCTCTAGTAATTT
GCAGGCGTCGTATCCCTCTATGACCTCTATTTGTCTTTGATTTGCAGTTT
TAGCACTGTCATCCTTTCTGTACAAGAACTGCTTCTTTGCAAATATTTCA
CGTTCCATGCACAAGAGAATATCACAATGCTATGTTCTTTAGGACTGGTT
AATCTTGAAAAATATTCCCAAACAAATGAGGTTTGATAGATATCATCATC
AACATCACCTTTATGGACCAGCTAGGAGACGGTGCACTCTTCTTGCTAAC
ATCTGCTTGGAGATTATTTACCGAACCAAGCGAGATATTCGGCACCGAGC
GATTCAAATACCATTCAGTGTGCTGCCCCATTGACGGAGTCGTGAGCGGA
CAAGTTCGTCGAAAACTTTCTGATCCAGACATACAAATTGACCGTGTTTG
ATAGATTTTAAACATGAATATCTTTGTCTTACTCGCTAAAATTTTCTGGA
CTATGCTAGAGGCCTTCGTGCAAAAGTTTGTCCCAGTGAAGAGGAAGAGT
GTGCGGGGGGAGGTTGTGTTGGTAACCGGGGCGGCTCACGGGGTCGGGCG
GTGTCTGGCTCTGGAGTTCGGCCGGCTGGGCGCCACCGTAGTGCTGTGGG
ACATCAATCGGGACGGGAATGAAGCAACTGCCGAACAGATCCGAGAGGAA
GGCGGCACGACCCGAGCCTACCAGTGTGACTGTAGCAAAAGGGAGGAAAT
ACAGAGGGTGGCCCAACAGGTACGTGTGTATTGTGTGTAACGACCGTTAC
TTTATCTAACACAGGCGTAAAAAGTCGCCAAACAACTTATGCAAGTTTGA
GTCAAGTGTGTCAACAGCTTGAAATGCCGTCCAATTTTACCAATAGGGTA
AACCGTTGTTTACCCATTACGATGTTTAGCACACCCGATCTGAAATTTAA
AAGCCATAAATTCATGTGTTTGTCCTCACCTCACACGAGGTCATAGATTG
GACTTTGGCCCGCGATCCTCGATGTTTGACGTCCGAACCCAGAGATAGTC
GTGGCGCCTCATCTGAGTTGACATCCCTACCCTACTCCTACACAATTACA
ACATTTACTCCAACTAGGTGATAATCCTTAAGATTTACAGGAGTTTGATG
AATTGCTACATTATTGCTTGATCCATACTGACAAAAATAAAATCATTATC
ATCATCATTATACTGACTTTTCTTTATCCCATTCTCACCTGCCACAGGTG
AAAGAAGAAGTAGGTGATGTGACTATTCTGTTCAACAATGCTGGTGTGAT
GACCACTGGCTCTGTACTGGACCTGACAGATGACCAGATTGAGAGGACCT
TCCAAGTCAATGTCCTTGCACATTTCTGGGTAAGGGCTAAGCCTCAAGGT
TTTGTCAGTGATGGTTGTTGTCTCAGACATTATGATATACCAAGCATGAT
TTAATATTTTTTCCATAAAGGGAAAAGTAAAAAACATCAAATGATAGACA
TGATAAAGTTCTTTTTCTTTACATATAACGTTACCAATCGTAGATGCCCT
TTTATGTGATTCTGAATATTGTTAAAAAGAATCACTATCTATATATCATA
TGTAACATTCTCTGACATTTTTTCTTAATTTTTATTAAAAGTGACATTTG
GTGAACAGATGTATTGTCGTTCAGACTCTCATGCCACCTTTTTGTTTGAA
TCGTTTGCAGACCATACGTGCATTTTTGCCAAGTATGATGACCAGGAACC
AGGGCCACATTGCTGCATTAGCCTCTATAGCAGGCTACAGTGGAAGTCCA
TATATGGTTGACTACAGGTTGAAGTATCAACTACTGTTCCTCTGAGCTGT
TTGCAAAATCTGCAAACTTGCTAATTGATAATAAACATGGCATAAAGGAA
GACTAACAATATGTTAAAAATTCTAATGCTTTCATGTTTTTGTAGAATCA
TGATAGAATTATTAAGAATGGACAGTTCTGAACAACAACATGTTGATCTG
GTCTTTGCATGGTTGTTATAACTTCCCTGGTCTTTGCTTATGATTTTGAT
AGCTCTTCAAAGCATGCTGTGGTAGGACTGATGGACACCTTGCAGAAAGA
GCTGGGACTGCAGGGGAAGGATGGAATCAGAACAACCACTGTCTGTCCCT
TCTTTGTCGACACAGGATTCTGTCCCAACCCTAAAATTGGAAGGTACAAC
ATTGCATACTGAACCCTGTGTGTTCATGAAAGAGCTGCCAGTCTGACACT
AGATCTAGGATGTCAGAATGGATTTCAATAGATTTAAGCCTGATTGACGA
CATAGGATGCTGGACACCATTCTTTTGCTAAAGTCAAATTTGTTTGAGAA
AAGGTTACCACTAATTTTGAAGGCACTTTATCTCTCAGCTCAGCACAGTC
AGACTATTACCATGTCTTTGACCAAGTCAACCATCGTCCTGTAGTGAAAA
CCACGTTGCTTTAATCTCTGTGTTGTAACCTTCCAGTTCTACAGGCGGGT
TACGTGTTCTGTCACCAGAGGAAGTTGCCTTGGAAGCAGTGGATGCTGTT
CTCAAGAACATAAGACGTGTCATCATGCCATCTGAGATGAGATCTGTACC
TCTCATGACCCAGTAAGTTTGATCACCTGTAGCAGTTTTTCAAGAACATA
CCTGTACTGCCAGTACATCTGGAAAAGATAAGGGGAAATGATATTATTGA
ATATTAGGATCTGCTACAGTTTTGTGTATCACAAAAGCTAAAATTAATTA
TCTATAGTGTTAACCATGTAAGTATTAGATTAGATTACTGTTATAGCGAG
CCAACTGTAATCACCTGCATCGTTTCTTTTCCCCTGTGATTAGACTCAAT
CTGTAGTATTGACTATTGTAGTGCTCATGCAGCCATACGATGTATGATGT
GTGTGCCCTTTATTTAGATATGTATTGCTGAATAATCCACAGTGGACAGT
GCCTGTCTGCAAACAGAAGTTTCTTTCCAATCATACAACTTGTTACAACA
TTCTTTCTTTTTCAGTGCATGTTATATGTTATTATATAGACCTCTGTATA
ACTGTACTACCTATAACATGATACTTTTCATTACAGACTGCTGCCTTACA
AGACACAATCATTGATGCAAAACTCAGCTGACATAAGCTTTGACCTGATG
CAGTCAGGACCACACAACAAGACTGACTAAAGATAGTAATGATATCACTC
CAGCCAAAAAAAGGCTCCAACAAGCACAACTTTGATAAATCAGCAACTTT
TGCATTCTAAAGCAGTTTAGTTTTCTGATGATTAAAGAGATTGATTTAGA
TATGAATGGAATTGTAACTTTCTTTCTTTCAATATTCACAACTAGATCTA
TTTGAAGAAGAAGATTTTTTTCAGAACTTTAGGACAACACCAATGTAATG
TACATGTACTATACATTCAGACTATTTGTAAGTTGATTGGATAGAGTAAA
TACGCATTGCTGTGTATGGTGTGAAATCTATTTTTTGATGTTGTAAACGA
CTAATGTAAAAAATCG Coding sequence (CDS) from alignment at Sc0000229:238628..243293- >BlTCONS00113560 ID=BlTCONS00113560|Name=BlTCONS00113560|organism=Branchiostoma lanceolatum|type=CDS|length=936bp|location=Sequence derived from alignment at Sc0000229:238628..243293- (Branchiostoma lanceolatum)
GCTGGTTTACTTTCAGGAGCAGCTGTTTTCTCTTCGGTAGTTGAATCCGC
CCTTACAGCCGCCATCTTACCGGCGGAGGCCTTCGTGCAAAAGTTTGTCC
CAGTGAAGAGGAAGAGTGTGCGGGGGGAGGTTGTGTTGGTAACCGGGGCG
GCTCACGGGGTCGGGCGGTGTCTGGCTCTGGAGTTCGGCCGGCTGGGCGC
CACCGTAGTGCTGTGGGACATCAATCGGGACGGGAATGAAGCAACTGCCG
AACAGATCCGAGAGGAAGGCGGCACGACCCGAGCCTACCAGTGTGACTGT
AGCAAAAGGGAGGAAATACAGAGGGTGGCCCAACAGGTGAAAGAAGAAGT
AGGTGATGTGACTATTCTGTTCAACAATGCTGGTGTGATGACCACTGGCT
CTGTACTGGACCTGACAGATGACCAGATTGAGAGGACCTTCCAAGTCAAT
GTCCTTGCACATTTCTGGACCATACGTGCATTTTTGCCAAGTATGATGAC
CAGGAACCAGGGCCACATTGCTGCATTAGCCTCTATAGCAGGCTACAGTG
GAAGTCCATATATGGTTGACTACAGCTCTTCAAAGCATGCTGTGGTAGGA
CTGATGGACACCTTGCAGAAAGAGCTGGGACTGCAGGGGAAGGATGGAAT
CAGAACAACCACTGTCTGTCCCTTCTTTGTCGACACAGGATTCTGTCCCA
ACCCTAAAATTGGAAGTTCTACAGGCGGGTTACGTGTTCTGTCACCAGAG
GAAGTTGCCTTGGAAGCAGTGGATGCTGTTCTCAAGAACATAAGACGTGT
CATCATGCCATCTGAGATGAGATCTGTACCTCTCATGACCCAACTGCTGC
CTTACAAGACACAATCATTGATGCAAAACTCAGCTGACATAAGCTTTGAC
CTGATGCAGTCAGGACCACACAACAAGACTGACTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113560-exon-Sc0000229-1564993656:243217..243293 | BlTCONS00113560-exon-Sc0000229-1564993656:243217..243293 | Branchiostoma lanceolatum | exon |
| BlTCONS00113560-exon-Sc0000229-1564993656:241375..241634 | BlTCONS00113560-exon-Sc0000229-1564993656:241375..241634 | Branchiostoma lanceolatum | exon |
| BlTCONS00113560-exon-Sc0000229-1564993656:240765..240896 | BlTCONS00113560-exon-Sc0000229-1564993656:240765..240896 | Branchiostoma lanceolatum | exon |
| BlTCONS00113560-exon-Sc0000229-1564993656:240327..240433 | BlTCONS00113560-exon-Sc0000229-1564993656:240327..240433 | Branchiostoma lanceolatum | exon |
| BlTCONS00113560-exon-Sc0000229-1564993656:239951..240091 | BlTCONS00113560-exon-Sc0000229-1564993656:239951..240091 | Branchiostoma lanceolatum | exon |
| BlTCONS00113560-exon-Sc0000229-1564993656:239532..239657 | BlTCONS00113560-exon-Sc0000229-1564993656:239532..239657 | Branchiostoma lanceolatum | exon |
| BlTCONS00113560-exon-Sc0000229-1564993656:238628..239057 | BlTCONS00113560-exon-Sc0000229-1564993656:238628..239057 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000229 | genome | Sc0000229:238628..243293 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055715 |
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