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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000229:166837..172410- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113551 ID=BlTCONS00113551|Name=BlTCONS00113551|organism=Branchiostoma lanceolatum|type=mRNA|length=5574bp|location=Sequence derived from alignment at Sc0000229:166837..172410- (Branchiostoma lanceolatum)
AGCTTGTCCAGAACACGAGATATCAAAACAGGAAGTTCCGCTGCAGTACC
GTAACAAGCCGCCAGGGAACCCAAAATCTAATCATTTCCTAGTCTCATCA
AGACCTACCCACTACCAAATATCAAGACAATCCATCCAATCCTTCTCGAG
TTATGCTGGTAGTTACATACATACAAACAAACGCTACCCTATGTATAACC
TTCTTGGCGAAGGTAATAAACGCCAGGATTGATTCAGTGGGACCATACAA
CAACAACAGAACACCCCCCTCCCCCCAATTCTTATTTGTGGTTTCGCTTT
ATCGTTAACGTTAGGCCTTTCTGGAGAGGTTCCTCTCCTTTTTCTCAGGA
GGGTCTCATATTTGGCAGAACAAATCGCGACAAGGTTAACAAGCACAGGT
TAAAGGCCCTGTTAAGGGCACTATGGTGATTATGCCCTGTGATTACGTAA
GGTCGATTTGTCGCGCTCCCATCCAAGCGTAACGCTTGCGACATGTTCAC
CATGCCAGTACGGTCAGACCTACAGAATTATGCCGCTGACGTCCCTGCAC
TAAAATCCTCTGTAATTGAATGTAGTCAGCAAATCACATTATAAGGAGAT
TGTTTGAGCATGCGATTGCAAAAAGCCCNCGATAGCAAAAAGCCCATTTG
TATGGCACTCGTCTCGCCGTGATATATGACAGATAAAAGCCACAAAACCT
GTTTTGCTTGTAGACAATACCTCCGTGAGGTGACAGTATACTAGTAGCAG
ACTACATTTGTCACTACGTATACTCAATCTTCGCCAGTGTTGCAGACATC
CCACGCAAGGTAACCCCAATATCTGTATGTTTGCTGCCAGCATGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTCGTGAAAGGTCATAGCCG
TGGTGTAATGTCATAATGGATTGTTTCACACTGTAGGATATGTATGCAGA
CGGCTATGTCTTCATTGATTCCTAAGACAGCTGTTAAAATGTGGATAGTA
TATACTAGGCACCTAATGTTAGTGTTAGTGAATTCTGATACGGTTAATGG
TATCAGGTTATTTTGCCATAACATGCAACATATTTGTTATTCTTTGAAAT
TCGGGGTCATTCATTTAGTTTCCACCCGAATGAACCGAAGCCAGCATAGC
TTATACACGTACACGTTGGTTCAATGCGTGTTTGTTTTTCTGTGTAGGAT
GGCACATGTTGGCGTAGCGACACAGCTGCTGTGGCTGATGTCACAGACCT
GGTACCTGACGAGGATTGCTCTGCGAATGACGTTTGTGTTCGTCAACAAC
CTGTACGTGGTCCCTGCGCACTTCGTGTGGCTGCTATGTCTGCAGCCCGT
GCGCATGGCCAGACCTGAACTATTCTGGGAACTCGAAGGCACCATGATCA
AGTGGATGTCGGCACAGATCGGCTGGTGGGGGTACAGTGCTGGTTATAAA
AGTAGGTAGTTCAATGACATGTTAGAGAGTGCCTTTTCAAATGCCTTTAA
GTTCTAAAGAAATCTCAATACTGCTTTCATACATTAATGGTTGAATCAGA
GATGCAAGCAGATTAAAAGGTCATTTTCTCTTAATCCGTGTACGCTTTTG
AGTCATCAATTAATACAAACTTGTGATGTAGTGTACCCTTCCATTTTGCT
GCTGTTTCAACACTTTCATTGTCACCTTGTATTTCAAGTGTACGAGTGTG
GAGAGGACATCTCTCACACCTATAGTGACGAGGCTATAGTGATAGTGAAC
CACCAGTCCACAGCTGACGTGGCCACCCTTATGGGAGCCCTCCAGCACAA
GGGACCAGTCGCGCGGCGCATGATGTGGATCATGGACTACATCCTCCTGT
ACACTAACTTTGGACTGTGTGCATGGGTACATGGGGACTTCTTTCTGCAG
CAGGTACGCTTATAACCCTTAGTAGCCTAACCCTGTCTCATAGTGATTTC
TTTCACTCTAAAAAGCCAAGTATTACATATATTTATATTGATACAGGGGC
AGGAGTATCGTGAGGAAATGCTGAAGTCGCTGAAGGATCATCTCAACACC
AGATATTCCAGCAGGAATCATCAGTGGATCGTGCTGTTCCCAGAAGGAGG
GTTTCTTAGGAAGAGACGAGAGAAGAGTCAGAAGTGAGTAAGATTATGTA
ACCCAGCCAGTCAAAGCAAAAATAAAGGAGAAGATCATCAACTCACTAGT
TTTTGTTGTTTGACATTTTAAGCCAGCATCCCATTCATTTTATAATAGAC
TGTTTCTTACGGTGTCACGAAAGAGATATATTTTAGACCAAGTAACATTA
TACAATACGAATTATGTCTTCATGATACGTTTTCAACCCTTGTACGCTCA
CAGGTACGCAAGAAAGAACAACCTGCCTATCTTACAACACGTGCTGCTTC
CCAGAACGGGAGCCATGAAAACCATCCTGGACAATGTTGGCCCACCTCTG
GCCCACACCAATGGGTCACTACAGGTGTTATGTAATAACGGCACCGCGCA
CCACTCGAATGGTAAGTGTTAGTCTCCAACCAGACCCAATAGATTGCAAA
GACCGTATCCAACTGGAAGAAGGAGCTTGTAATGCAAAACGTACTTCCTC
TGCCAGTTTGATACGGTCTTTATGCAACCTATAGATCTGCTTGGAGATTA
GGTAAGTGTGACACTGTGTAGTCTCTGCACGTCTCCGGGAACAGTTGACT
ACGAGACACGACTGAAAATTAACTTGGTTTCAACTTTCGCCAAGTACTTT
TTTCAAAAGCTTTATGTCAACGTTTGCACGGTTATGGATACAGATCCCAC
TTATAATGATAATCAATTATTGCTTATCTTTAAGGCTAATCGCAAGTAAC
TAAACAATAACGTACATTATCATATAGCCAGATGACGTCGACCAAACAGA
AGTTCCCATTGAATATCGGTAATGTCACAGAAGTGCCACAAGAGGTGAAT
AATAAATCTCAAGTAGTGAATAATGAATCTCAAGAGGTAAATAATGATGT
TGATCAATCAGAAGGAGATATACACATGACATTGACCAATCAGAGGGACA
CCCAGAAGGGAGGAATGATGATGAATAGAGTAGAGTACAGTACAGTAGAG
TAGATCTTAAAATAAAAAAATTGACATGCCAAGATTGCAATGTTATGAAA
TATTTTCTGTGGAAACTTTGGTTAAAAGAATGAAATCTGTAATCTTCTGT
ACGAAAAGGACAAATGTAAACTTTCAAATGCATTTCTCAAAAATTGGACG
AATGTATTTACATGTTAATTATTAGTCATACAGGAATTTGTTACTCATGG
GTCAGTTTGGATAGGCTATATGATAAAAACGTTATATTAACGACCAGCCT
ATCCCTAGGTGTATATGGTGTCATAATGCCTGATCATTTGCTATAAACAC
CTCATAAATCCACCGAGTTCGCGATAGCAAATGCGTTATGACACCATATA
TACCTAGGGCCCGGCGGGTCATCAACCCATAATTATCAGTTGCCTAATGT
TAATAACCTAACGTAAGATTCCATATTGATCATTGTTGTTGGGTTTGACT
TTTTCTTTGCAGGAAGCGGAAGGTGAAATGGCATCATATAAAATGTTTAA
ACATCTCTCCTCGTCAAAGGTCGTCATGTGAAGTGGATTGTTGACATCAC
CATTGCATATGAGCACGGCAGACCGCTGGACATTCAGACCCTAACCTCTG
GATGGAGGCCGCCATATCCCACTACACTGCACTACAGGTACTGCAGAGTG
CATCTCTCTAGTCCTTTTATGTGAAATATTGGTCCTTTTTGTTCTTCATT
GTAGGTTTGGACGGAAATTCTGAAAGGGATGCTATATATATAAGAGCTAG
GTGATGTTGGCATAAGGCCATTAAGGGTAACAGGCAATGGCGCTGGGGTA
AGGTTATGGTCAGTTATGAGCCAGCTACTTGCTGTAAAAATCCGAACAGC
ATATGGTTTACCTAGTGTTGTATGAAATATGAGCACTCAACACAACTCAC
CGCGTCAATATGAATGATGGTTACGCCCTATCAAACTGTCCCATACAGAC
ATTTCCCAACTTCCGAGGTCCCGCGGGACGAGACAGGCCTGACCAAGTGG
CTGTACCAGCGGTTTGCAGAGAAGGAAGAACTCCTGTCCCACTTCTACTC
CACAGGCCGGTTCCCTGCAGGCACGACACGGCCAGGCGTCACAACAACAG
ATGAAGCGGTGGAGATAACATTCAGCCCGTGGTGGATGTTGTCTATCCAC
CTCTTCTATTTGTGTTCCACCGCTCTGCAGTGGTATACCGTTAGCGCTAT
TCTACAACTGATCTTGTAATCAGAAGTTTTGGTGTTTTCAAATTGGAAAG
AATTTGATCAAAGAGCAAGTGAGAGTAAAGTTACAACAGCAGTTATTAAG
TACATGTACAAGTATGTATAAGTATGGACGAGTGTTTTGGCTATCGCGTA
ATTCTGATCACGTTGCTGTAATTTCATCGCAAGGGTGTACGCACCAGTTA
TAATTATCTAATTCATATTCCTTGAATTCAGACAATATTTGTATTGTCGT
ATATATATGATGGCAACCACTCGTATTATCTTTATTCGTATTCAGATACA
TAGTACAGATACATAATACAGATACATAGTACAGATACAAATACAGATCG
AGTATGGTGACCGTGTCAATTGACACGGTAGCCTTCGCGTGAATTTGTTT
AAGGTGGATGACAGGTTGCGAATCTGAGACCCACACACTTTGGGCATCCG
CCATCTCCAGCGGCACCAATTCGAGGGAGACGTGCTGGTTCTGGTGGGGA
TGCTTGCAGCGAGCTGCGGGATGACTCTTACACTCGAGGTCCGCCTTGAT
AACGCCAGCCCGTCTGGCGCTGCTCTCGTCCGCCAGTTGAAGACAGCTGC
CGTTGGAGACTTGTCCCTCTAACTGAGGGAGGAATGCGTGTAAAGTGCCT
TTCCCAAGGGCACAACGTCGGGGCGCAAGTTCGGACATGTCTATGGGCAC
AACCCTGGGATTCGATCCCGGGTCCCATTGTTTGACAGCCGTGCGCTCTG
CACTTGCGCCACACGACGCCACTAATGCATATATATATATATGCATTAGT
ATTGAATGTATAGATATAGAAACACATTGTATACTAGCAACGTAGTTTAA
TCTTCGTCGCTTGTATCACGTGTATGCCTAATGCTTCACTTTATGCTTGT
GCATCGTCATTAATTGTTGTCAACTTGCAATTAGCCTACGGGCAATAAAC
TTATCACTATTATATTCGAATTCATCTCCAATCACAAGCGGTACTTACAA
TGTGTTTTATGTTGACATGTCGAGTCGTTTCGGGACATTCGCATTTTAGC
AAACAGCGAAATATCGACAATCGAGTAAGTGTACATATCTCACCGGAATA
AGTTGCTCTGTAACATGTCTGCTCACGATCAACGTATACTCAGCCGGGAC
AGGCGTGAACCAAATGTACTAGAAGTTTCCGTTGATTTGCTTAAAATACG
ACATCCTGCAACCTCAGTTGTTAAAGATAAATAGAGGACATGCAGGAAAA
GCTTCAAGACTATTCATGTCGTAA Coding sequence (CDS) from alignment at Sc0000229:166837..172410- >BlTCONS00113551 ID=BlTCONS00113551|Name=BlTCONS00113551|organism=Branchiostoma lanceolatum|type=CDS|length=1152bp|location=Sequence derived from alignment at Sc0000229:166837..172410- (Branchiostoma lanceolatum)
ATGGCACATGTTGGCGTAGCGACACAGCTGCTGTGGCTGATGTCACAGAC
CTGGTACCTGACGAGGATTGCTCTGCGAATGACGTTTGTGTTCGTCAACA
ACCTGTACGTGGTCCCTGCGCACTTCGTGTGGCTGCTATGTCTGCAGCCC
GTGCGCATGGCCAGACCTGAACTATTCTGGGAACTCGAAGGCACCATGAT
CAAGTGGATGTCGGCACAGATCGGCTGGTGGGGGTACAGTGCTGGTTATA
AAATGTACGAGTGTGGAGAGGACATCTCTCACACCTATAGTGACGAGGCT
ATAGTGATAGTGAACCACCAGTCCACAGCTGACGTGGCCACCCTTATGGG
AGCCCTCCAGCACAAGGGACCAGTCGCGCGGCGCATGATGTGGATCATGG
ACTACATCCTCCTGTACACTAACTTTGGACTGTGTGCATGGGTACATGGG
GACTTCTTTCTGCAGCAGGGGCAGGAGTATCGTGAGGAAATGCTGAAGTC
GCTGAAGGATCATCTCAACACCAGATATTCCAGCAGGAATCATCAGTGGA
TCGTGCTGTTCCCAGAAGGAGGGTTTCTTAGGAAGAGACGAGAGAAGAGT
CAGAAGTACGCAAGAAAGAACAACCTGCCTATCTTACAACACGTGCTGCT
TCCCAGAACGGGAGCCATGAAAACCATCCTGGACAATGTTGGCCCACCTC
TGGCCCACACCAATGGGTCACTACAGGTGTTATGTAATAACGGCACCGCG
CACCACTCGAATGGTCGTCATGTGAAGTGGATTGTTGACATCACCATTGC
ATATGAGCACGGCAGACCGCTGGACATTCAGACCCTAACCTCTGGATGGA
GGCCGCCATATCCCACTACACTGCACTACAGACATTTCCCAACTTCCGAG
GTCCCGCGGGACGAGACAGGCCTGACCAAGTGGCTGTACCAGCGGTTTGC
AGAGAAGGAAGAACTCCTGTCCCACTTCTACTCCACAGGCCGGTTCCCTG
CAGGCACGACACGGCCAGGCGTCACAACAACAGATGAAGCGGTGGAGATA
ACATTCAGCCCGTGGTGGATGTTGTCTATCCACCTCTTCTATTTGTGTTC
CACCGCTCTGCAGTGGTATACCGTTAGCGCTATTCTACAACTGATCTTGT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113551-exon-Sc0000229-1564993656:171602..172410 | BlTCONS00113551-exon-Sc0000229-1564993656:171602..172410 | Branchiostoma lanceolatum | exon |
| BlTCONS00113551-exon-Sc0000229-1564993656:170960..171213 | BlTCONS00113551-exon-Sc0000229-1564993656:170960..171213 | Branchiostoma lanceolatum | exon |
| BlTCONS00113551-exon-Sc0000229-1564993656:170508..170722 | BlTCONS00113551-exon-Sc0000229-1564993656:170508..170722 | Branchiostoma lanceolatum | exon |
| BlTCONS00113551-exon-Sc0000229-1564993656:170278..170414 | BlTCONS00113551-exon-Sc0000229-1564993656:170278..170414 | Branchiostoma lanceolatum | exon |
| BlTCONS00113551-exon-Sc0000229-1564993656:169900..170057 | BlTCONS00113551-exon-Sc0000229-1564993656:169900..170057 | Branchiostoma lanceolatum | exon |
| BlTCONS00113551-exon-Sc0000229-1564993656:168674..168791 | BlTCONS00113551-exon-Sc0000229-1564993656:168674..168791 | Branchiostoma lanceolatum | exon |
| BlTCONS00113551-exon-Sc0000229-1564993656:166837..168362 | BlTCONS00113551-exon-Sc0000229-1564993656:166837..168362 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000229 | genome | Sc0000229:166837..172410 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055711 |
|
