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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000229:166837..171642- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113550 ID=BlTCONS00113550|Name=BlTCONS00113550|organism=Branchiostoma lanceolatum|type=mRNA|length=4806bp|location=Sequence derived from alignment at Sc0000229:166837..171642- (Branchiostoma lanceolatum)
TATACTCAATCTTCGCCAGTGTTGCAGACATCCCACGCAAGGTAACCCCA
ATATCTGTATGTTTGCTGCCAGCATGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGAACTCGTGAAAGGTCATAGCCGTGGTGTAATGTCATAATG
GATTGTTTCACACTGTAGGATATGTATGCAGACGGCTATGTCTTCATTGA
TTCCTAAGACAGCTGTTAAAATGTGGATAGTATATACTAGGCACCTAATG
TTAGTGTTAGTGAATTCTGATACGGTTAATGGTATCAGGTTATTTTGCCA
TAACATGCAACATATTTGTTATTCTTTGAAATTCGGGGTCATTCATTTAG
TTTCCACCCGAATGAACCGAAGCCAGCATAGCTTATACACGTACACGTTG
GTTCAATGCGTGTTTGTTTTTCTGTGTAGGATGGCACATGTTGGCGTAGC
GACACAGCTGCTGTGGCTGATGTCACAGACCTGGTACCTGACGAGGATTG
CTCTGCGAATGACGTTTGTGTTCGTCAACAACCTGTACGTGGTCCCTGCG
CACTTCGTGTGGCTGCTATGTCTGCAGCCCGTGCGCATGGCCAGACCTGA
ACTATTCTGGGAACTCGAAGGCACCATGATCAAGTGGATGTCGGCACAGA
TCGGCTGGTGGGGGTACAGTGCTGGTTATAAAAGTAGGTAGTTCAATGAC
ATGTTAGAGAGTGCCTTTTCAAATGCCTTTAAGTTCTAAAGAAATCTCAA
TACTGCTTTCATACATTAATGGTTGAATCAGAGATGCAAGCAGATTAAAA
GGTCATTTTCTCTTAATCCGTGTACGCTTTTGAGTCATCAATTAATACAA
ACTTGTGATGTAGTGTACCCTTCCATTTTGCTGCTGTTTCAACACTTTCA
TTGTCACCTTGTATTTCAAGTGTACGAGTGTGGAGAGGACATCTCTCACA
CCTATAGTGACGAGGCTATAGTGATAGTGAACCACCAGTCCACAGCTGAC
GTGGCCACCCTTATGGGAGCCCTCCAGCACAAGGGACCAGTCGCGCGGCG
CATGATGTGGATCATGGACTACATCCTCCTGTACACTAACTTTGGACTGT
GTGCATGGGTACATGGGGACTTCTTTCTGCAGCAGGTACGCTTATAACCC
TTAGTAGCCTAACCCTGTCTCATAGTGATTTCTTTCACTCTAAAAAGCCA
AGTATTACATATATTTATATTGATACAGGGGCAGGAGTATCGTGAGGAAA
TGCTGAAGTCGCTGAAGGATCATCTCAACACCAGATATTCCAGCAGGAAT
CATCAGTGGATCGTGCTGTTCCCAGAAGGAGGGTTTCTTAGGAAGAGACG
AGAGAAGAGTCAGAAGTGAGTAAGATTATGTAACCCAGCCAGTCAAAGCA
AAAATAAAGGAGAAGATCATCAACTCACTAGTTTTTGTTGTTTGACATTT
TAAGCCAGCATCCCATTCATTTTATAATAGACTGTTTCTTACGGTGTCAC
GAAAGAGATATATTTTAGACCAAGTAACATTATACAATACGAATTATGTC
TTCATGATACGTTTTCAACCCTTGTACGCTCACAGGTACGCAAGAAAGAA
CAACCTGCCTATCTTACAACACGTGCTGCTTCCCAGAACGGGAGCCATGA
AAACCATCCTGGACAATGTTGGCCCACCTCTGGCCCACACCAATGGGTCA
CTACAGGTGTTATGTAATAACGGCACCGCGCACCACTCGAATGGTAAGTG
TTAGTCTCCAACCAGACCCAATAGATTGCAAAGACCGTATCCAACTGGAA
GAAGGAGCTTGTAATGCAAAACGTACTTCCTCTGCCAGTTTGATACGGTC
TTTATGCAACCTATAGATCTGCTTGGAGATTAGGTAAGTGTGACACTGTG
TAGTCTCTGCACGTCTCCGGGAACAGTTGACTACGAGACACGACTGAAAA
TTAACTTGGTTTCAACTTTCGCCAAGTACTTTTTTCAAAAGCTTTATGTC
AACGTTTGCACGGTTATGGATACAGATCCCACTTATAATGATAATCAATT
ATTGCTTATCTTTAAGGCTAATCGCAAGTAACTAAACAATAACGTACATT
ATCATATAGCCAGATGACGTCGACCAAACAGAAGTTCCCATTGAATATCG
GTAATGTCACAGAAGTGCCACAAGAGGTGAATAATAAATCTCAAGTAGTG
AATAATGAATCTCAAGAGGTAAATAATGATGTTGATCAATCAGAAGGAGA
TATACACATGACATTGACCAATCAGAGGGACACCCAGAAGGGAGGAATGA
TGATGAATAGAGTAGAGTACAGTACAGTAGAGTAGATCTTAAAATAAAAA
AATTGACATGCCAAGATTGCAATGTTATGAAATATTTTCTGTGGAAACTT
TGGTTAAAAGAATGAAATCTGTAATCTTCTGTACGAAAAGGACAAATGTA
AACTTTCAAATGCATTTCTCAAAAATTGGACGAATGTATTTACATGTTAA
TTATTAGTCATACAGGAATTTGTTACTCATGGGTCAGTTTGGATAGGCTA
TATGATAAAAACGTTATATTAACGACCAGCCTATCCCTAGGTGTATATGG
TGTCATAATGCCTGATCATTTGCTATAAACACCTCATAAATCCACCGAGT
TCGCGATAGCAAATGCGTTATGACACCATATATACCTAGGGCCCGGCGGG
TCATCAACCCATAATTATCAGTTGCCTAATGTTAATAACCTAACGTAAGA
TTCCATATTGATCATTGTTGTTGGGTTTGACTTTTTCTTTGCAGGAAGCG
GAAGGTGAAATGGCATCATATAAAATGTTTAAACATCTCTCCTCGTCAAA
GGTCGTCATGTGAAGTGGATTGTTGACATCACCATTGCATATGAGCACGG
CAGACCGCTGGACATTCAGACCCTAACCTCTGGATGGAGGCCGCCATATC
CCACTACACTGCACTACAGGTACTGCAGAGTGCATCTCTCTAGTCCTTTT
ATGTGAAATATTGGTCCTTTTTGTTCTTCATTGTAGGTTTGGACGGAAAT
TCTGAAAGGGATGCTATATATATAAGAGCTAGGTGATGTTGGCATAAGGC
CATTAAGGGTAACAGGCAATGGCGCTGGGGTAAGGTTATGGTCAGTTATG
AGCCAGCTACTTGCTGTAAAAATCCGAACAGCATATGGTTTACCTAGTGT
TGTATGAAATATGAGCACTCAACACAACTCACCGCGTCAATATGAATGAT
GGTTACGCCCTATCAAACTGTCCCATACAGACATTTCCCAACTTCCGAGG
TCCCGCGGGACGAGACAGGCCTGACCAAGTGGCTGTACCAGCGGTTTGCA
GAGAAGGAAGAACTCCTGTCCCACTTCTACTCCACAGGCCGGTTCCCTGC
AGGCACGACACGGCCAGGCGTCACAACAACAGATGAAGCGGTGGAGATAA
CATTCAGCCCGTGGTGGATGTTGTCTATCCACCTCTTCTATTTGTGTTCC
ACCGCTCTGCAGTGGTATACCGTTAGCGCTATTCTACAACTGATCTTGTA
ATCAGAAGTTTTGGTGTTTTCAAATTGGAAAGAATTTGATCAAAGAGCAA
GTGAGAGTAAAGTTACAACAGCAGTTATTAAGTACATGTACAAGTATGTA
TAAGTATGGACGAGTGTTTTGGCTATCGCGTAATTCTGATCACGTTGCTG
TAATTTCATCGCAAGGGTGTACGCACCAGTTATAATTATCTAATTCATAT
TCCTTGAATTCAGACAATATTTGTATTGTCGTATATATATGATGGCAACC
ACTCGTATTATCTTTATTCGTATTCAGATACATAGTACAGATACATAATA
CAGATACATAGTACAGATACAAATACAGATCGAGTATGGTGACCGTGTCA
ATTGACACGGTAGCCTTCGCGTGAATTTGTTTAAGGTGGATGACAGGTTG
CGAATCTGAGACCCACACACTTTGGGCATCCGCCATCTCCAGCGGCACCA
ATTCGAGGGAGACGTGCTGGTTCTGGTGGGGATGCTTGCAGCGAGCTGCG
GGATGACTCTTACACTCGAGGTCCGCCTTGATAACGCCAGCCCGTCTGGC
GCTGCTCTCGTCCGCCAGTTGAAGACAGCTGCCGTTGGAGACTTGTCCCT
CTAACTGAGGGAGGAATGCGTGTAAAGTGCCTTTCCCAAGGGCACAACGT
CGGGGCGCAAGTTCGGACATGTCTATGGGCACAACCCTGGGATTCGATCC
CGGGTCCCATTGTTTGACAGCCGTGCGCTCTGCACTTGCGCCACACGACG
CCACTAATGCATATATATATATATGCATTAGTATTGAATGTATAGATATA
GAAACACATTGTATACTAGCAACGTAGTTTAATCTTCGTCGCTTGTATCA
CGTGTATGCCTAATGCTTCACTTTATGCTTGTGCATCGTCATTAATTGTT
GTCAACTTGCAATTAGCCTACGGGCAATAAACTTATCACTATTATATTCG
AATTCATCTCCAATCACAAGCGGTACTTACAATGTGTTTTATGTTGACAT
GTCGAGTCGTTTCGGGACATTCGCATTTTAGCAAACAGCGAAATATCGAC
AATCGAGTAAGTGTACATATCTCACCGGAATAAGTTGCTCTGTAACATGT
CTGCTCACGATCAACGTATACTCAGCCGGGACAGGCGTGAACCAAATGTA
CTAGAAGTTTCCGTTGATTTGCTTAAAATACGACATCCTGCAACCTCAGT
TGTTAAAGATAAATAGAGGACATGCAGGAAAAGCTTCAAGACTATTCATG
TCGTAA Coding sequence (CDS) from alignment at Sc0000229:166837..171642- >BlTCONS00113550 ID=BlTCONS00113550|Name=BlTCONS00113550|organism=Branchiostoma lanceolatum|type=CDS|length=819bp|location=Sequence derived from alignment at Sc0000229:166837..171642- (Branchiostoma lanceolatum)
TATACTCAATCTTCGCCAGTGTTGCAGACATCCCACGCAAGGATGGCACA
TGTTGGCGTAGCGACACAGCTGCTGTGGCTGATGTCACAGACCTGGTACC
TGACGAGGATTGCTCTGCGAATGACGTTTGTGTTCGTCAACAACCTGTAC
GTGGTCCCTGCGCACTTCGTGTGGCTGCTATGTCTGCAGCCCGTGCGCAT
GGCCAGACCTGAACTATTCTGGGAACTCGAAGGCACCATGATCAAGTGGA
TGTCGGCACAGATCGGCTGGTGGGGGTACAGTGCTGGTTATAAAATGTAC
GAGTGTGGAGAGGACATCTCTCACACCTATAGTGACGAGGCTATAGTGAT
AGTGAACCACCAGTCCACAGCTGACGTGGCCACCCTTATGGGAGCCCTCC
AGCACAAGGGACCAGTCGCGCGGCGCATGATGTGGATCATGGACTACATC
CTCCTGTACACTAACTTTGGACTGTGTGCATGGGTACATGGGGACTTCTT
TCTGCAGCAGGGGCAGGAGTATCGTGAGGAAATGCTGAAGTCGCTGAAGG
ATCATCTCAACACCAGATATTCCAGCAGGAATCATCAGTGGATCGTGCTG
TTCCCAGAAGGAGGGTTTCTTAGGAAGAGACGAGAGAAGAGTCAGAAGTA
CGCAAGAAAGAACAACCTGCCTATCTTACAACACGTGCTGCTTCCCAGAA
CGGGAGCCATGAAAACCATCCTGGACAATGTTGGCCCACCTCTGGCCCAC
ACCAATGGGTCACTACAGGTGTTATGTAATAACGGCACCGCGCACCACTC
GAATGGAAGCGGAAGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113550-exon-Sc0000229-1564993656:171602..171642 | BlTCONS00113550-exon-Sc0000229-1564993656:171602..171642 | Branchiostoma lanceolatum | exon |
| BlTCONS00113550-exon-Sc0000229-1564993656:170960..171213 | BlTCONS00113550-exon-Sc0000229-1564993656:170960..171213 | Branchiostoma lanceolatum | exon |
| BlTCONS00113550-exon-Sc0000229-1564993656:170508..170722 | BlTCONS00113550-exon-Sc0000229-1564993656:170508..170722 | Branchiostoma lanceolatum | exon |
| BlTCONS00113550-exon-Sc0000229-1564993656:170278..170414 | BlTCONS00113550-exon-Sc0000229-1564993656:170278..170414 | Branchiostoma lanceolatum | exon |
| BlTCONS00113550-exon-Sc0000229-1564993656:169900..170057 | BlTCONS00113550-exon-Sc0000229-1564993656:169900..170057 | Branchiostoma lanceolatum | exon |
| BlTCONS00113550-exon-Sc0000229-1564993656:168674..168848 | BlTCONS00113550-exon-Sc0000229-1564993656:168674..168848 | Branchiostoma lanceolatum | exon |
| BlTCONS00113550-exon-Sc0000229-1564993656:166837..168362 | BlTCONS00113550-exon-Sc0000229-1564993656:166837..168362 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000229 | genome | Sc0000229:166837..171642 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055711 |
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