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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000229:143934..152432- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113543 ID=BlTCONS00113543|Name=BlTCONS00113543|organism=Branchiostoma lanceolatum|type=mRNA|length=8499bp|location=Sequence derived from alignment at Sc0000229:143934..152432- (Branchiostoma lanceolatum)
TGGTGGACGACAATACGCCTGAACATGCCGCAGTCAGAAATTTAACGTTT
TCTTTATTCTAGATGTCTGCTGAACAATTTGCTCTGCTAAAATGAAACCA
GATCAACACAAAAAGAAGAGGAGTGCGCAGTATAAGAGGAAACATGGCAT
TCAAGACAAAAGCAAGGACAATAAAGGAAAAGATGACGACACATCATCGT
CCAAGTCTTCATCTTCTAGCGCCGCAAGCGGTTCAAAATCATCACAAGTA
CAACGAGAAGGAAGTAGGGAGAACGACACAGGCAGAGGAAAAGACGAAAT
AAGAGGAGGGGCAAGAAAAGTAGCAGATTCTAGTGATGTAGGTAGCAGGG
TACATATAGCTTTTGTACTTTAGCAAGCATATTACAGTAACCAGAACGTG
AACAGACTTCACGTGTAACACAGCTGAAGATTTCTACAATTCTTCAGCAA
ATAAGTTGAATTCAAAATCTTTGCAGCACAAAATGTATTTCATAATCACC
TTTATACTTGTGTCAAAGCTGCCCACTCCAGAAATGCTGCACAAATCATG
CAGTAAGATTTTACTAGTGCCCATGTACGTACTCTCTGTTTCAAACTTTC
AGTCTTTGGGCTTTGCTGTTACTTCAATCAAGAAAATCTCTTGCTTTAAT
ATATAAATCATTGCAACTAAGTGCAGGGAATTTACAGACACGTTATTATG
GTGCCAGCCTGTTCACATAACCTACCAGGAAGGACAGCTAGGGTCATACT
CCATATCATTATATCGTTATCTCACATTATCATGTCATTGATAACAGTAA
ATCTTAAAACTTTTGCAGTGGTTTTATTTTCATGGTGACCTCTCCACCGC
AAATTTATGACACCTCGACTATGTCTCCCTTGTATGACAACTGCACTACA
AAATTGTTCAACCATGAATGTAAACACTGCAAAAAATATCCTTTTCCCGC
TCCTGCCGCAAGACAAAAACAGTGCGGAAGTAAATGAATTTACCGGTACA
ATAAGTCATTTCAGTCCAATGACATTGTGTTATCGTTGCCCTCCTCTGCT
ACATTGCAGGAATCCTCCCATTCAGAAGAGGAGGCAGGGGTTGGTGGGAC
CTTCTCCAGGCGAAAGGTACTGAGTAACTGGGACAGGTATGAAGCCCCCC
TGCCACGCTACGAGGACAGAAGTGACGTGACACTGAGGGGTGCAGACTTT
AGATCCCTTCTTGCCACATCAGGTCAGTTTTACTCTGCTACAAGTTTAGC
CATCTTCATCCCTGCGGGAGATCTTTACCTCAAGCCGCTATCTTGGGCAG
AACATCCATTTCCTTCTAGCAAACTAGTTGTTGCACCCCATGGTAGTAAT
TATTTTGACTACAAAGTGCCGTTCAGGACAAGTTGAAAAGTGCTACTCCC
AGTAACGGTACTGGCATGGCAGTTATCTAAGTAATAACATACATGCACAG
GTTTTAATGGGGAACCAACCACACTACTATGTGCATGATGGGCGTCCATT
TGTTCCTTGTTTCGCAAGCTGACAATTTCTAGCCGTAGAGTGATTGATCC
TGCAGAGATGATGACTAACTGTTGCAGTTGTATCCTGCCAGGGTAGCTAT
GTACATTCAAAACATCCACTTGTGATTGATGATGTCAAAGAGAGTTGTAC
AGTATTTTGTATATGCATGTATCATCAGTACATGTGCTTTCCTGATGTGT
TGTGTGGGTGTTTGCAGGTGAAGCTGAAGCACAGTTCAGGTTTGAAGATG
AGAAGGACTGGGAGGCTGATGATGCTGGTGAAGCACAGGTAAAAAGATAT
GATCTGAACATTTTGCATACCAAATAATAAATAAGAGTGGTGCTCTTTCA
CCCTTTTTGAACAAATATATTTTAAATGATAACAATGATAACTTAATTGC
AAATCCATGCCCAACCTGGCTAATTGGAAACTGAGCAACACAATGGTATC
CAATGTGTGTACACTTAACAGAGAAAAACATGAATTTATAGATGAATTAA
AGGTGAAATATAAACTATTCTACCCTATTTAAGACTTGCCTTGAACTCTT
CTAAGGAGTGGCTGTCCACCATATCACACATAAACTAGACACATTTTCCA
TGCAGTGTCTCTTTATATGTACACATTACAGGAAGGATTTTGTTGTGCCA
ATGTTATAGACTGCTTAACTGCATGTTGACAAAATGGAAGATGTATTGGA
GAACTATTATTGTACCATTCTGTCTCAGCTCTACAGCTATATATGGCTCT
ATGCCAGAACCAGTAGATACTGTTTTATCCACTCCCTTTCTCCTACCACA
GCTCCCTACAGGAGGTGCCCTGTCCCTGGACTGTGACCTCCTGGCAGTGT
CTCTACAGGCCATTCCTCTACACAGGAGACTCAACATCAGCCCAGAGTCA
CTTACGGTCAGTTGTTTGTCTTGGTTCAGTTTAAGTCTAGCAGGAAGATG
TATGTACATGTACTTAGTTTGTAGATACATAGGTCTCTGCTTGATCACCT
TTATACTAAAATTGTAGGTTGAGAATTTGTAAAGCTGTCCGATGTATAGT
CTGGTATTATCAAGTTGAGGTACAAAAATGTATGAGTGGCTGTCACAAGT
GGATTGTTAGGCTATGCTTCCAACCAAGCACATCGAAATAGTCTAACCTT
ATTATTGTAAGTACCCACTGAGTACAAAAATGCTCTTTGCCCTAAGGTAA
GTTGTACATAAAATCCTGATTTGAGATACTGAGTGGTATACCTTAATGTT
TCCAGAAGCAGATTGACTTTACCAAGTGGATTGTGGAAGATTTTAATCAT
ATTATGATTACAGCAATCAGAGTTTGCTCCAACAGAGGCACATTTTGCCC
TTTGCATTGCAATGAAGACTGATGGTATGCTAATTGTCAATAAGGAAGAT
AGCTTAGGTACCCTTGCCCTTGGCAGAGGACAAACTGTTATGGGGTACTA
AACAGATAAGTGGTGGGCAGAAGGGTGGATGAGACTGCTGATTCTGTTTT
GTGCACTAGGCTAGTTCTTTGGTGCACGGATTTTTGCAGGTAAAAGAGTA
ACTGACACAAAGCTTATTGCATGTCTAAATAATTGAAATACATGTACGAT
TACAACAAAAAAATCCAAGAAACTCCACTGACAAGACAAAATGAAACTCT
ATTACACACACACACACACACACACACAGACACCCCCCCCCACACACACA
CACACTCACTAAGTTATATGTTACACACACACACATATGCACACACACAC
ACACACACACACACACACACACTTCCCAAGTGTCAGGATTCTGCAAATGT
GAGTAAGTACTACCACTGTGATTCATATGTTTCCATTCCAACTGCCATTT
CACTATTGTTGCAATGCTACAACTATCAGACTATTTGGAAACCAATAAGA
GGAAATCCCATGAGAAAGTATGCCCCCAAGTGCTCCTAATTGCCGGCTAA
GGTACCTTATTGTGCATCAATCAAGCTACTAATAGACAAGGCACCATACT
AATTGGACCAAAAAGAATTACATGTTCCAAAATTGCAATACTTTTCTGGC
AAATTAGACCTTTCCTCACGTATAATTAGTTTACAATTTCGTTTTAATAG
TATTTGATACTCCAATCTGCACTGATTTTGTAAGTAAACAAATTAGTCAC
GTTGATGAGTACAGATTCTGAAATCATGTGCCACATGTGTAACTTTTCCT
CACCAAGTTAACACTGGTTACTATGGTTTGTCTTTTGGAAATCTCAATTA
AAACAATTTCAAAGTCTGGGACGTCAGTAGAGTGAAAGCGATCAAAGCAA
GAGCTTCACTAAACATTAACACCATTGCAGTACTAGTATACAGTGTGGGT
GACACTACATTATCATGCTGTAATCCCTGCATCTGATTGTATCCATATGT
ATGTGTCTCTATCTCTCTGTGTGTGTGTGTGTGTAGTGGTAGTAATTCAT
TGGAAATTTCATTTAACATTAGTTAAGTTCTTGAATCTTTGTTCCTGAAG
CCAAGCCAAGAGAGAGAGTTATGATGATGTAAGCCAAACTCTACCTATGT
AGTTATAGCTATATTATATATATATACTAGCCCATTTCTATAGAATATTG
CATGACAAATATCAATCATTATAGTTTTTTAATAGCATTGTTGTCCATGT
TACCATTCTAAGTCAGTCATGAAACTGCATGTTAAATGTCTACCAAGTTG
AGAACAAAGTTTAGTGAACAAAGGTGGTGACCTTGATGCTGTTTTTCTAT
TTGGCAGAAATATGATACAATTTGCTACAAATGAACTTCAACTTGATACA
AGCTTCCTTCTTGTGTTGAAAGAGGCACTGGAATGCTGCCGGTAATTTTC
TTCTCAGGAAATATTATCCTACAATGGCTGTCTCCGCCCATGATAAAGTT
ATTGCAGTTCATGGTGATACTTTGTGATGATAGATGTACAATAAAGTGCA
GACTCTGATGAAAACTAGCCGCCTGACAACCTGGTGATACCAATCACAGC
ATAAAGCACAAAACCTTGCAATCCTCCTCATCTTGAAATGCCATCTAATG
GTTTTCTTGATAATGTCCATGAAATAGGCATTTAGGGTCCATCACATAAA
GCATGATATTGGCTTCTGCAGTATATATTTCCTTTGCTTTCCTGTCAGGA
GTATGCCCTTACCATAAAGCAAATGGTTGATAACAAAGGCATGGGAAAAT
ACTAATTAGGACTATAAGAACACTTTTAACTAAGGAAATACACAATAAGG
TACATAGAGAGAATTAACTAAACCTGTACATTTATCATACCTTTGCTTTC
CTAGGAGGATATAGTAGAGAGGTTCAATGAAGAAGCAGCCAGCCATGCAT
CATGCGAGCAGCAGACGCTTCATCACACTCCCCTCAAACCCAGGTTGTCC
ATCACAGAGTCAACGGCATCCAGCATCCTGGACAATCTTCTCAGGAGGGT
GGAGCACAAACCTCTGCAGCTCAACCTGGATGTGTCCCTGAATCCCAAAC
AGCAAAGCAAGTCTGCTGATGTCTTGAAGTTTGACTTCTCAGTGCCAGCT
GCTTCCTCTGAGGAAGTGCCAGTTGCTTTGGTCGAGTCACCTGACCTGGA
AACAGGACAGGACCCTGAGGAGAGTGTAGTGGCGAGTGATGAGACTGTGG
ACAGACCTGTAAAGGACACAATGTTGGACAGAGGACAGGATGAGTTAGAT
GATGAGTTAGATGTTCTCCTGTCACTGGACTCTGCGACACACCCAGATAC
ACCCACCACAGACAGGGAAAAAGAAGGTAAGAATGGACTTTTTGCCAGTG
TGAAATTGGGCCAACATTTGAATCTGATAATAACAGGAGTCTGACCTGAC
CTCCATATCCACTTATTACAGATAACTCTAATCTGGGAATAAATGGAAAC
CAGGCATGGAATGTTTCTTTAGTCCAGGAGACTTAACAGTAGGTCTGGCT
ATCCTAGTGAAACATTTAGTACTTAGAAGCAGAATCTGCTCATATAGAAA
TATAGCTGTCTAACCAGATATGTGATTTTCAGGCTGATTTACCCTTTTAT
AGATTTGTTCTTGTGTTACAAATACAATGCCACGGACTGGTAACTCTCTT
TATGCTGGACACTTTCTGAATGGGAGAAAAACAAGAATGGCAGTAACAAT
GATAATCATGTTTATAGGTCATGTTGATGATAGTGGTTTTGACTAGCATG
TAATCCGCATGTTGTGCCAATTTTAACTTCCAGATATCATCATAAACAAT
GTTGAGAAGGAAGAATATCAGCCAAATGAAGAGGAACTAAAAGACCTCAA
GAAGGATTCAGTGGTGGAGCCTACTAAGAAACAACACGGTACATTTTTGC
TATATTTTCCATCACAAAGTAATTTGCAAAAACAGGTCACCAACTTCACA
TGTTGTATGAGTGATGATAAGTGCTTCCTCTCTTCTGGTTCAAGTCATTT
TTCTGCAACATCCTGATCATAGCTGTATCATCACTCATCCTCTGAAAATT
GACCTAAATATAACCTGCATTCTAATGTGCTATGGGAATAAGTATCGTGT
GGAATTTATGAACTGTATGGAGTTTTAAGTCATTAGCCTGCAGTTAGTCG
TGATTAACTGATGGGAGAAAAGGGTACATTGATTGTGTTCTCATGAGAAA
TGAAACTCAAATACTGCTGCACACCGAGGATCATGGTAAATCTAGTGCAA
GTCATCGGATATTCATTTAGCATCATGTTGCCTGCTGGATCATTCCCAGT
TGAGGAAGAAAGAGCATATTGTCATCACATGACGAAACGTTCCAGTAATA
ACAACTTGTCATGCAGCATTTTGTATGGTAGTGTTGTGGAGCATTATTTT
CATATCTGAATGCTGAATGTTACTTTTCCTTACATATCTTTCAGGTAAAA
CATATGGAAAACAGTAGACTGAAAGCATAAAAGACTTCATTTCCTATATG
TACAAATGTACATCTTTGTACATGTATTTAAGGTCACGGATTGCATCTAT
CTCTTCATGGATTCATGGGAATCCATGAGGAGATAGATGTTGCCAGCCAG
TTTTTTTTCTTAAAACCAGTAATCATATTGATAGATTTTGTGGCTGCTGT
GTCAGTGGTTTGGACATCTTGGTTTAAGAAATTCTGAAGCCAAGAAGTCA
GTAGTTTTGTACAGTTTTGATTAGAAGACATTTTCCATTCTTATGATTTT
TTGTCATTGTCCTACAGACGTTCCCCAGCCAAAGGAGGAGACAGTGGATT
TGGAAGACTGGTTGGACAGTGTTCTGGATGACTGAGTAATCTGACAAAAT
TTTTCTCAAAATGCTGCAAGTCACGCTGCAGAAAGTCACACCTGAATTCA
TCATGCCTTTCCCTGGTTATCACAAACTCTACAAGTGCACTTTAAGCACA
AGTTTTATAACAAAGCTAGTGGCTTACATGAATATTGAATGTAAAATAAG
CAACAAATGTCCAGCTGCTCCGTCAAATGTCATTGCATGGTTTTGATGCA
CCAGTGAGAAACGGTCCTGAAGTAAGGAGACAAAATATAACTCCTTGTGC
AACAGATGCACTGCTGAGTGATGGAGTTTCAATTTATTCCCTAGCAGTCA
CCCGTAATACTGGGTGATACTGATCATGATACTACCGGGGTATTGATAGT
ATTGACACGTCCCACCACTATCACATGGTGGATTTATTGATTTTCTGTGG
CTAGATCTGGTTTTGAGACACTGTTTTTGATAGATTTCAATGTTATGTTT
TGTGGATATGTAAATGTAGCTGCCAAGCTAAAATTAGGTAGCTGTACCAT
TCTGATTGCTTGGAGGTTGTTCCTTTCAGTAAAAAGTACATGTAGTTTCA
ATGTTAATTTGCATGCAAGGCAGCCTTTGACCACCAGCCCCTAAAACGTG
TAATCCTTCCTATCATGGACGAGTGTTGTCTGTGGTCACTGACCTGTGTA
GCTTATACACTTTCAAAGTCAACTGGAAGTTTCCCAAGGACATGCATGAG
GAGGGAGTCTTATTACATATAGTAAAGTCAGTGCCTTTGGGACATTATGT
ATCAGAGGTAAAGTAAGGGGCTCAGCAGAATTTGAAATTGGAAAAGACTT
ATGGGCCTAACAACACATGCTCAAGACTGGGACACAGGAAAGGATGTGTT
GACATTATTACTGGCCCCTTCACATTCTTTTACCTTGAATTCATTGTTTG
CTCTACCCAGTCATTACAGCGGTAGTCTTGCTTGAATAAAAACGGCCAAA
ATCTGATGACATCTACTCAATGTAAGCATCTGAATGATTTTCACTGGTGT
GAAACTACTAGTGATGCATCACTGCATTAAAGGCATGCCAATGTAAAAAG
TCTATCTTGAATGTGAACTTTATGTTTCTCAATCAATAAATTGTTGAAGC
ATTTAATTATAGACTTAGTCTAGCACATCATAAGGAGTTTTCAATCAGAA
GTGCATGTAGATGAGCTGGATACAATTTTTTGGGTCATATCCAACTGAAT
TCCAGCATGATCAGTCTGAAACCTGGCAGAGGTAAACTTATCTTTTTAAA
AATCAGTGAATATAATACAACTTGTGTTGCCATAGGAAATGTTTTCCTGT
CTAGTATGTAGAATTGAAAGGACATCCTGGACAACAGGAACGCCTTCAGC
AGAATATCAAGTGTTGTAACAGATAATGTTAGGCATTGAAAGCAATACAC
GAGTGTGCTGGATTGACATCGGGGTTGATTGAAGTAGCCTATGGCTTGAC
ACTGCCTGATAACCTCTGGTACCAGCAGCATCTGCCTATCATGATGAGAC
TGAATGGAAATGTGACATATGGCAGATAACATATGTGATGTAGCCTACAG
AAAAGGTAAGCCTGGCCAGGAAGAGTGAGACTTCTAGGTTCCTGGAAATA
CATGTATAATCAAAACATAGCTACAAAATTACATCCACGTCTGGTTCAAG
AAATCTGCAAATTCAACGAACGAAACAACAGCTTGATATTCTATTAAAG Coding sequence (CDS) from alignment at Sc0000229:143934..152432- >BlTCONS00113543 ID=BlTCONS00113543|Name=BlTCONS00113543|organism=Branchiostoma lanceolatum|type=CDS|length=1233bp|location=Sequence derived from alignment at Sc0000229:143934..152432- (Branchiostoma lanceolatum)
ATGAAACCAGATCAACACAAAAAGAAGAGGAGTGCGCAGTATAAGAGGAA
ACATGGCATTCAAGACAAAAGCAAGGACAATAAAGGAAAAGATGACGACA
CATCATCGTCCAAGTCTTCATCTTCTAGCGCCGCAAGCGGTTCAAAATCA
TCACAAGTACAACGAGAAGGAAGTAGGGAGAACGACACAGGCAGAGGAAA
AGACGAAATAAGAGGAGGGGCAAGAAAAGTAGCAGATTCTAGTGATGAAT
CCTCCCATTCAGAAGAGGAGGCAGGGGTTGGTGGGACCTTCTCCAGGCGA
AAGGTACTGAGTAACTGGGACAGGTATGAAGCCCCCCTGCCACGCTACGA
GGACAGAAGTGACGTGACACTGAGGGGTGCAGACTTTAGATCCCTTCTTG
CCACATCAGGTGAAGCTGAAGCACAGTTCAGGTTTGAAGATGAGAAGGAC
TGGGAGGCTGATGATGCTGGTGAAGCACAGCTCCCTACAGGAGGTGCCCT
GTCCCTGGACTGTGACCTCCTGGCAGTGTCTCTACAGGCCATTCCTCTAC
ACAGGAGACTCAACATCAGCCCAGAGTCACTTACGGAGGATATAGTAGAG
AGGTTCAATGAAGAAGCAGCCAGCCATGCATCATGCGAGCAGCAGACGCT
TCATCACACTCCCCTCAAACCCAGGTTGTCCATCACAGAGTCAACGGCAT
CCAGCATCCTGGACAATCTTCTCAGGAGGGTGGAGCACAAACCTCTGCAG
CTCAACCTGGATGTGTCCCTGAATCCCAAACAGCAAAGCAAGTCTGCTGA
TGTCTTGAAGTTTGACTTCTCAGTGCCAGCTGCTTCCTCTGAGGAAGTGC
CAGTTGCTTTGGTCGAGTCACCTGACCTGGAAACAGGACAGGACCCTGAG
GAGAGTGTAGTGGCGAGTGATGAGACTGTGGACAGACCTGTAAAGGACAC
AATGTTGGACAGAGGACAGGATGAGTTAGATGATGAGTTAGATGTTCTCC
TGTCACTGGACTCTGCGACACACCCAGATACACCCACCACAGACAGGGAA
AAAGAAGGTAATATCATCATAAACAATGTTGAGAAGGAAGAATATCAGCC
AAATGAAGAGGAACTAAAAGACCTCAAGAAGGATTCAGTGGTGGAGCCTA
CTAAGAAACAACACGACGTTCCCCAGCCAAAGGAGGAGACAGTGGATTTG
GAAGACTGGTTGGACAGTGTTCTGGATGACTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113543-exon-Sc0000229-1564993656:152096..152432 | BlTCONS00113543-exon-Sc0000229-1564993656:152096..152432 | Branchiostoma lanceolatum | exon |
| BlTCONS00113543-exon-Sc0000229-1564993656:151211..151373 | BlTCONS00113543-exon-Sc0000229-1564993656:151211..151373 | Branchiostoma lanceolatum | exon |
| BlTCONS00113543-exon-Sc0000229-1564993656:150645..150715 | BlTCONS00113543-exon-Sc0000229-1564993656:150645..150715 | Branchiostoma lanceolatum | exon |
| BlTCONS00113543-exon-Sc0000229-1564993656:150027..150131 | BlTCONS00113543-exon-Sc0000229-1564993656:150027..150131 | Branchiostoma lanceolatum | exon |
| BlTCONS00113543-exon-Sc0000229-1564993656:147154..147628 | BlTCONS00113543-exon-Sc0000229-1564993656:147154..147628 | Branchiostoma lanceolatum | exon |
| BlTCONS00113543-exon-Sc0000229-1564993656:146595..146699 | BlTCONS00113543-exon-Sc0000229-1564993656:146595..146699 | Branchiostoma lanceolatum | exon |
| BlTCONS00113543-exon-Sc0000229-1564993656:143934..145715 | BlTCONS00113543-exon-Sc0000229-1564993656:143934..145715 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000229 | genome | Sc0000229:143934..152432 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055706 |
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