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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000229:143934..152425- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113542 ID=BlTCONS00113542|Name=BlTCONS00113542|organism=Branchiostoma lanceolatum|type=mRNA|length=8492bp|location=Sequence derived from alignment at Sc0000229:143934..152425- (Branchiostoma lanceolatum)
CGACAATACGCCTGAACATGCCGCAGTCAGAAATTTAACGTTTTCTTTAT
TCTAGATGTCTGCTGAACAATTTGCTCTGCTAAAATGAAACCAGATCAAC
ACAAAAAGAAGAGGAGTGCGCAGTATAAGAGGAAACATGGCATTCAAGAC
AAAAGCAAGGACAATAAAGGAAAAGATGACGACACATCATCGTCCAAGTC
TTCATCTTCTAGCGCCGCAAGCGGTTCAAAATCATCACAAGTACAACGAG
AAGGAAGTAGGGAGAACGACACAGGCAGAGGAAAAGACGAAATAAGAGGA
GGGGCAAGAAAAGTAGCAGATTCTAGTGATGTAGGTAGCAGGGTACATAT
AGCTTTTGTACTTTAGCAAGCATATTACAGTAACCAGAACGTGAACAGAC
TTCACGTGTAACACAGCTGAAGATTTCTACAATTCTTCAGCAAATAAGTT
GAATTCAAAATCTTTGCAGCACAAAATGTATTTCATAATCACCTTTATAC
TTGTGTCAAAGCTGCCCACTCCAGAAATGCTGCACAAATCATGCAGTAAG
ATTTTACTAGTGCCCATGTACGTACTCTCTGTTTCAAACTTTCAGTCTTT
GGGCTTTGCTGTTACTTCAATCAAGAAAATCTCTTGCTTTAATATATAAA
TCATTGCAACTAAGTGCAGGGAATTTACAGACACGTTATTATGGTGCCAG
CCTGTTCACATAACCTACCAGGAAGGACAGCTAGGGTCATACTCCATATC
ATTATATCGTTATCTCACATTATCATGTCATTGATAACAGTAAATCTTAA
AACTTTTGCAGTGGTTTTATTTTCATGGTGACCTCTCCACCGCAAATTTA
TGACACCTCGACTATGTCTCCCTTGTATGACAACTGCACTACAAAATTGT
TCAACCATGAATGTAAACACTGCAAAAAATATCCTTTTCCCGCTCCTGCC
GCAAGACAAAAACAGTGCGGAAGTAAATGAATTTACCGGTACAATAAGTC
ATTTCAGTCCAATGACATTGTGTTATCGTTGCCCTCCTCTGCTACATTGC
AGGAATCCTCCCATTCAGAAGAGGAGGCAGGGGTTGGTGGGACCTTCTCC
AGGCGAAAGGTACTGAGTAACTGGGACAGGTATGAAGCCCCCCTGCCACG
CTACGAGGACAGAAGTGACGTGACACTGAGGGGTGCAGACTTTAGATCCC
TTCTTGCCACATCAGGTCAGTTTTACTCTGCTACAAGTTTAGCCATCTTC
ATCCCTGCGGGAGATCTTTACCTCAAGCCGCTATCTTGGGCAGAACATCC
ATTTCCTTCTAGCAAACTAGTTGTTGCACCCCATGGTAGTAATTATTTTG
ACTACAAAGTGCCGTTCAGGACAAGTTGAAAAGTGCTACTCCCAGTAACG
GTACTGGCATGGCAGTTATCTAAGTAATAACATACATGCACAGGTTTTAA
TGGGGAACCAACCACACTACTATGTGCATGATGGGCGTCCATTTGTTCCT
TGTTTCGCAAGCTGACAATTTCTAGCCGTAGAGTGATTGATCCTGCAGAG
ATGATGACTAACTGTTGCAGTTGTATCCTGCCAGGGTAGCTATGTACATT
CAAAACATCCACTTGTGATTGATGATGTCAAAGAGAGTTGTACAGTATTT
TGTATATGCATGTATCATCAGTACATGTGCTTTCCTGATGTGTTGTGTGG
GTGTTTGCAGGTGAAGCTGAAGCACAGTTCAGGTTTGAAGATGAGAAGGA
CTGGGAGGCTGATGATGCTGGTGAAGCACAGGTAAAAAGATATGATCTGA
ACATTTTGCATACCAAATAATAAATAAGAGTGGTGCTCTTTCACCCTTTT
TGAACAAATATATTTTAAATGATAACAATGATAACTTAATTGCAAATCCA
TGCCCAACCTGGCTAATTGGAAACTGAGCAACACAATGGTATCCAATGTG
TGTACACTTAACAGAGAAAAACATGAATTTATAGATGAATTAAAGGTGAA
ATATAAACTATTCTACCCTATTTAAGACTTGCCTTGAACTCTTCTAAGGA
GTGGCTGTCCACCATATCACACATAAACTAGACACATTTTCCATGCAGTG
TCTCTTTATATGTACACATTACAGGAAGGATTTTGTTGTGCCAATGTTAT
AGACTGCTTAACTGCATGTTGACAAAATGGAAGATGTATTGGAGAACTAT
TATTGTACCATTCTGTCTCAGCTCTACAGCTATATATGGCTCTATGCCAG
AACCAGTAGATACTGTTTTATCCACTCCCTTTCTCCTACCACAGCTCCCT
ACAGGAGGTGCCCTGTCCCTGGACTGTGACCTCCTGGCAGTGTCTCTACA
GGCCATTCCTCTACACAGGAGACTCAACATCAGCCCAGAGTCACTTACGG
TCAGTTGTTTGTCTTGGTTCAGTTTAAGTCTAGCAGGAAGATGTATGTAC
ATGTACTTAGTTTGTAGATACATAGGTCTCTGCTTGATCACCTTTATACT
AAAATTGTAGGTTGAGAATTTGTAAAGCTGTCCGATGTATAGTCTGGTAT
TATCAAGTTGAGGTACAAAAATGTATGAGTGGCTGTCACAAGTGGATTGT
TAGGCTATGCTTCCAACCAAGCACATCGAAATAGTCTAACCTTATTATTG
TAAGTACCCACTGAGTACAAAAATGCTCTTTGCCCTAAGGTAAGTTGTAC
ATAAAATCCTGATTTGAGATACTGAGTGGTATACCTTAATGTTTCCAGAA
GCAGATTGACTTTACCAAGTGGATTGTGGAAGATTTTAATCATATTATGA
TTACAGCAATCAGAGTTTGCTCCAACAGAGGCACATTTTGCCCTTTGCAT
TGCAATGAAGACTGATGGTATGCTAATTGTCAATAAGGAAGATAGCTTAG
GTACCCTTGCCCTTGGCAGAGGACAAACTGTTATGGGGTACTAAACAGAT
AAGTGGTGGGCAGAAGGGTGGATGAGACTGCTGATTCTGTTTTGTGCACT
AGGCTAGTTCTTTGGTGCACGGATTTTTGCAGGTAAAAGAGTAACTGACA
CAAAGCTTATTGCATGTCTAAATAATTGAAATACATGTACGATTACAACA
AAAAAATCCAAGAAACTCCACTGACAAGACAAAATGAAACTCTATTACAC
ACACACACACACACACACACAGACACCCCCCCCCACACACACACACACTC
ACTAAGTTATATGTTACACACACACACATATGCACACACACACACACACA
CACACACACACACACTTCCCAAGTGTCAGGATTCTGCAAATGTGAGTAAG
TACTACCACTGTGATTCATATGTTTCCATTCCAACTGCCATTTCACTATT
GTTGCAATGCTACAACTATCAGACTATTTGGAAACCAATAAGAGGAAATC
CCATGAGAAAGTATGCCCCCAAGTGCTCCTAATTGCCGGCTAAGGTACCT
TATTGTGCATCAATCAAGCTACTAATAGACAAGGCACCATACTAATTGGA
CCAAAAAGAATTACATGTTCCAAAATTGCAATACTTTTCTGGCAAATTAG
ACCTTTCCTCACGTATAATTAGTTTACAATTTCGTTTTAATAGTATTTGA
TACTCCAATCTGCACTGATTTTGTAAGTAAACAAATTAGTCACGTTGATG
AGTACAGATTCTGAAATCATGTGCCACATGTGTAACTTTTCCTCACCAAG
TTAACACTGGTTACTATGGTTTGTCTTTTGGAAATCTCAATTAAAACAAT
TTCAAAGTCTGGGACGTCAGTAGAGTGAAAGCGATCAAAGCAAGAGCTTC
ACTAAACATTAACACCATTGCAGTACTAGTATACAGTGTGGGTGACACTA
CATTATCATGCTGTAATCCCTGCATCTGATTGTATCCATATGTATGTGTC
TCTATCTCTCTGTGTGTGTGTGTGTGTAGTGGTAGTAATTCATTGGAAAT
TTCATTTAACATTAGTTAAGTTCTTGAATCTTTGTTCCTGAAGCCAAGCC
AAGAGAGAGAGTTATGATGATGTAAGCCAAACTCTACCTATGTAGTTATA
GCTATATTATATATATATACTAGCCCATTTCTATAGAATATTGCATGACA
AATATCAATCATTATAGTTTTTTAATAGCATTGTTGTCCATGTTACCATT
CTAAGTCAGTCATGAAACTGCATGTTAAATGTCTACCAAGTTGAGAACAA
AGTTTAGTGAACAAAGGTGGTGACCTTGATGCTGTTTTTCTATTTGGCAG
AAATATGATACAATTTGCTACAAATGAACTTCAACTTGATACAAGCTTCC
TTCTTGTGTTGAAAGAGGCACTGGAATGCTGCCGGTAATTTTCTTCTCAG
GAAATATTATCCTACAATGGCTGTCTCCGCCCATGATAAAGTTATTGCAG
TTCATGGTGATACTTTGTGATGATAGATGTACAATAAAGTGCAGACTCTG
ATGAAAACTAGCCGCCTGACAACCTGGTGATACCAATCACAGCATAAAGC
ACAAAACCTTGCAATCCTCCTCATCTTGAAATGCCATCTAATGGTTTTCT
TGATAATGTCCATGAAATAGGCATTTAGGGTCCATCACATAAAGCATGAT
ATTGGCTTCTGCAGTATATATTTCCTTTGCTTTCCTGTCAGGAGTATGCC
CTTACCATAAAGCAAATGGTTGATAACAAAGGCATGGGAAAATACTAATT
AGGACTATAAGAACACTTTTAACTAAGGAAATACACAATAAGGTACATAG
AGAGAATTAACTAAACCTGTACATTTATCATACCTTTGCTTTCCTAGGAG
GATATAGTAGAGAGGTTCAATGAAGAAGCAGCCAGCCATGCATCATGCGA
GCAGCAGACGCTTCATCACACTCCCCTCAAACCCAGGTTGTCCATCACAG
AGTCAACGGCATCCAGCATCCTGGACAATCTTCTCAGGAGGGTGGAGCAC
AAACCTCTGCAGCTCAACCTGGATGTGTCCCTGAATCCCAAACAGCAAAG
CAAGTCTGCTGATGTCTTGAAGTTTGACTTCTCAGTGCCAGCTGCTTCCT
CTGAGGAAGTGCCAGTTGCTTTGGTCGAGTCACCTGACCTGGAAACAGGA
CAGGACCCTGAGGAGAGTGTAGTGGCGAGTGATGAGACTGTGGACAGACC
TGTAAAGGACACAATGTTGGACAGAGGACAGGATGAGTTAGATGATGAGT
TAGATGTTCTCCTGTCACTGGACTCTGCGACACACCCAGATACACCCACC
ACAGACAGGGAAAAAGAAGGTAAGAATGGACTTTTTGCCAGTGTGAAATT
GGGCCAACATTTGAATCTGATAATAACAGGAGTCTGACCTGACCTCCATA
TCCACTTATTACAGATAACTCTAATCTGGGAATAAATGGAAACCAGGCAT
GGAATGTTTCTTTAGTCCAGGAGACTTAACAGTAGGTCTGGCTATCCTAG
TGAAACATTTAGTACTTAGAAGCAGAATCTGCTCATATAGAAATATAGCT
GTCTAACCAGATATGTGATTTTCAGGCTGATTTACCCTTTTATAGATTTG
TTCTTGTGTTACAAATACAATGCCACGGACTGGTAACTCTCTTTATGCTG
GACACTTTCTGAATGGGAGAAAAACAAGAATGGCAGTAACAATGATAATC
ATGTTTATAGGTCATGTTGATGATAGTGGTTTTGACTAGCATGTAATCCG
CATGTTGTGCCAATTTTAACTTCCAGATATCATCATAAACAATGTTGAGA
AGGAAGAATATCAGCCAAATGAAGAGGAACTAAAAGACCTCAAGAAGGAT
TCAGTGGTGGAGCCTACTAAGAAACAACACGGTACATTTTTGCTATATTT
TCCATCACAAAGTAATTTGCAAAAACAGGTCACCAACTTCACATGTTGTA
TGAGTGATGATAAGTGCTTCCTCTCTTCTGGTTCAAGTCATTTTTCTGCA
ACATCCTGATCATAGCTGTATCATCACTCATCCTCTGAAAATTGACCTAA
ATATAACCTGCATTCTAATGTGCTATGGGAATAAGTATCGTGTGGAATTT
ATGAACTGTATGGAGTTTTAAGTCATTAGCCTGCAGTTAGTCGTGATTAA
CTGATGGGAGAAAAGGGTACATTGATTGTGTTCTCATGAGAAATGAAACT
CAAATACTGCTGCACACCGAGGATCATGGTAAATCTAGTGCAAGTCATCG
GATATTCATTTAGCATCATGTTGCCTGCTGGATCATTCCCAGTTGAGGAA
GAAAGAGCATATTGTCATCACATGACGAAACGTTCCAGTAATAACAACTT
GTCATGCAGCATTTTGTATGGTAGTGTTGTGGAGCATTATTTTCATATCT
GAATGCTGAATGTTACTTTTCCTTACATATCTTTCAGGTAAAACATATGG
AAAACAGTAGACTGAAAGCATAAAAGACTTCATTTCCTATATGTACAAAT
GTACATCTTTGTACATGTATTTAAGGTCACGGATTGCATCTATCTCTTCA
TGGATTCATGGGAATCCATGAGGAGATAGATGTTGCCAGCCAGTTTTTTT
TCTTAAAACCAGTAATCATATTGATAGATTTTGTGGCTGCTGTGTCAGTG
GTTTGGACATCTTGGTTTAAGAAATTCTGAAGCCAAGAAGTCAGTAGTTT
TGTACAGTTTTGATTAGAAGACATTTTCCATTCTTATGATTTTTTGTCAT
TGTCCTACAGACGTTCCCCAGCCAAAGGAGGAGACAGTGGATTTGGAAGA
CTGGTTGGACAGTGTTCTGGATGACTGAGTAATCTGACAAAATTTTTCTC
AAAATGCTGCAAGTCACGCTGCAGAAAGTCACACCTGAATTCATCATGCC
TTTCCCTGGTTATCACAAACTCTACAAGTGCACTTTAAGCACAAGTTTTA
TAACAAAGCTAGTGGCTTACATGAATATTGAATGTAAAATAAGCAACAAA
TGTCCAGCTGCTCCGTCAAATGTCATTGCATGGTTTTGATGCACCAGTGA
GAAACGGTCCTGAAGTAAGGAGACAAAATATAACTCCTTGTGCAACAGAT
GCACTGCTGAGTGATGGAGTTTCAATTTATTCCCTAGCAGTCACCCGTAA
TACTGGGTGATACTGATCATGATACTACCGGGGTATTGATAGTATTGACA
CGTCCCACCACTATCACATGGTGGATTTATTGATTTTCTGTGGCTAGATC
TGGTTTTGAGACACTGTTTTTGATAGATTTCAATGTTATGTTTTGTGGAT
ATGTAAATGTAGCTGCCAAGCTAAAATTAGGTAGCTGTACCATTCTGATT
GCTTGGAGGTTGTTCCTTTCAGTAAAAAGTACATGTAGTTTCAATGTTAA
TTTGCATGCAAGGCAGCCTTTGACCACCAGCCCCTAAAACGTGTAATCCT
TCCTATCATGGACGAGTGTTGTCTGTGGTCACTGACCTGTGTAGCTTATA
CACTTTCAAAGTCAACTGGAAGTTTCCCAAGGACATGCATGAGGAGGGAG
TCTTATTACATATAGTAAAGTCAGTGCCTTTGGGACATTATGTATCAGAG
GTAAAGTAAGGGGCTCAGCAGAATTTGAAATTGGAAAAGACTTATGGGCC
TAACAACACATGCTCAAGACTGGGACACAGGAAAGGATGTGTTGACATTA
TTACTGGCCCCTTCACATTCTTTTACCTTGAATTCATTGTTTGCTCTACC
CAGTCATTACAGCGGTAGTCTTGCTTGAATAAAAACGGCCAAAATCTGAT
GACATCTACTCAATGTAAGCATCTGAATGATTTTCACTGGTGTGAAACTA
CTAGTGATGCATCACTGCATTAAAGGCATGCCAATGTAAAAAGTCTATCT
TGAATGTGAACTTTATGTTTCTCAATCAATAAATTGTTGAAGCATTTAAT
TATAGACTTAGTCTAGCACATCATAAGGAGTTTTCAATCAGAAGTGCATG
TAGATGAGCTGGATACAATTTTTTGGGTCATATCCAACTGAATTCCAGCA
TGATCAGTCTGAAACCTGGCAGAGGTAAACTTATCTTTTTAAAAATCAGT
GAATATAATACAACTTGTGTTGCCATAGGAAATGTTTTCCTGTCTAGTAT
GTAGAATTGAAAGGACATCCTGGACAACAGGAACGCCTTCAGCAGAATAT
CAAGTGTTGTAACAGATAATGTTAGGCATTGAAAGCAATACACGAGTGTG
CTGGATTGACATCGGGGTTGATTGAAGTAGCCTATGGCTTGACACTGCCT
GATAACCTCTGGTACCAGCAGCATCTGCCTATCATGATGAGACTGAATGG
AAATGTGACATATGGCAGATAACATATGTGATGTAGCCTACAGAAAAGGT
AAGCCTGGCCAGGAAGAGTGAGACTTCTAGGTTCCTGGAAATACATGTAT
AATCAAAACATAGCTACAAAATTACATCCACGTCTGGTTCAAGAAATCTG
CAAATTCAACGAACGAAACAACAGCTTGATATTCTATTAAAG Coding sequence (CDS) from alignment at Sc0000229:143934..152425- >BlTCONS00113542 ID=BlTCONS00113542|Name=BlTCONS00113542|organism=Branchiostoma lanceolatum|type=CDS|length=792bp|location=Sequence derived from alignment at Sc0000229:143934..152425- (Branchiostoma lanceolatum)
ATGAGAAGGACTGGGAGGCTGATGATGCTGGTGAAGCACAGCTCCCTACA
GGAGGTGCCCTGTCCCTGGACTGTGACCTCCTGGCAGTGTCTCTACAGGC
CATTCCTCTACACAGGAGACTCAACATCAGCCCAGAGTCACTTACGGGAG
GATATAGTAGAGAGGTTCAATGAAGAAGCAGCCAGCCATGCATCATGCGA
GCAGCAGACGCTTCATCACACTCCCCTCAAACCCAGGTTGTCCATCACAG
AGTCAACGGCATCCAGCATCCTGGACAATCTTCTCAGGAGGGTGGAGCAC
AAACCTCTGCAGCTCAACCTGGATGTGTCCCTGAATCCCAAACAGCAAAG
CAAGTCTGCTGATGTCTTGAAGTTTGACTTCTCAGTGCCAGCTGCTTCCT
CTGAGGAAGTGCCAGTTGCTTTGGTCGAGTCACCTGACCTGGAAACAGGA
CAGGACCCTGAGGAGAGTGTAGTGGCGAGTGATGAGACTGTGGACAGACC
TGTAAAGGACACAATGTTGGACAGAGGACAGGATGAGTTAGATGATGAGT
TAGATGTTCTCCTGTCACTGGACTCTGCGACACACCCAGATACACCCACC
ACAGACAGGGAAAAAGAAGATATCATCATAAACAATGTTGAGAAGGAAGA
ATATCAGCCAAATGAAGAGGAACTAAAAGACCTCAAGAAGGATTCAGTGG
TGGAGCCTACTAAGAAACAACACGACGTTCCCCAGCCAAAGGAGGAGACA
GTGGATTTGGAAGACTGGTTGGACAGTGTTCTGGATGACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113542-exon-Sc0000229-1564993656:152096..152425 | BlTCONS00113542-exon-Sc0000229-1564993656:152096..152425 | Branchiostoma lanceolatum | exon |
| BlTCONS00113542-exon-Sc0000229-1564993656:151211..151373 | BlTCONS00113542-exon-Sc0000229-1564993656:151211..151373 | Branchiostoma lanceolatum | exon |
| BlTCONS00113542-exon-Sc0000229-1564993656:150645..150715 | BlTCONS00113542-exon-Sc0000229-1564993656:150645..150715 | Branchiostoma lanceolatum | exon |
| BlTCONS00113542-exon-Sc0000229-1564993656:150027..150131 | BlTCONS00113542-exon-Sc0000229-1564993656:150027..150131 | Branchiostoma lanceolatum | exon |
| BlTCONS00113542-exon-Sc0000229-1564993656:147157..147629 | BlTCONS00113542-exon-Sc0000229-1564993656:147157..147629 | Branchiostoma lanceolatum | exon |
| BlTCONS00113542-exon-Sc0000229-1564993656:146595..146699 | BlTCONS00113542-exon-Sc0000229-1564993656:146595..146699 | Branchiostoma lanceolatum | exon |
| BlTCONS00113542-exon-Sc0000229-1564993656:143934..145715 | BlTCONS00113542-exon-Sc0000229-1564993656:143934..145715 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000229 | genome | Sc0000229:143934..152425 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055706 |
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