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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000229:103363..107000- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113534 ID=BlTCONS00113534|Name=BlTCONS00113534|organism=Branchiostoma lanceolatum|type=mRNA|length=3638bp|location=Sequence derived from alignment at Sc0000229:103363..107000- (Branchiostoma lanceolatum)
CAATCCTTAAGATTCTCACATTTCCCTCTCGCCACTTTCCATATAGAGGT
TATTCAATCCTTACACAACAGGGCAAACAGGAAGCGATCTAAAATCATGA
CCACTTTAGGTAAAACAATTAGTCGTGCACGGCACATGGCCTGTGAAAAG
TAGAGAATATGTTTTCATACATTCTGTTGTGTATACAAATGGCTTAGACT
GCAGTTATCCTCAGGAAATTGGGAAAACTATAATAAGACACAGCCCCAAA
CAGAGATTACCCAACATATATTGCTCCAAAACGGAGAGGGATTAAGAGAG
AATGGCAATGACAATATGCTGCCTGCTTTGACATCCGTTAATGGTTTATG
CTGCGTAAAGTAATTGGTGTTTATGAACTTTCCACAAGACTGCGTCATTT
CAAACAATGTTTATGCACGCCGTCTCTGGGGATTTAAAAACAACAATCCT
TTGATTCTCGTCGCCAACGTCGCATATTCTGCAACAAAAGGATGCAAAGG
CAAAACCAACTCCTCTTTATAGAAAAGAAACACAATACTGTCCTATCGTC
TGGAACAAGTTCATGCACACCCAACGTTCAGTACCTGGGCGATAGTCATT
TGCTGGAGGCTGGAAAACCAGGGCACGATAGTCTTGATTCTAGCAGTCAA
AACCTAACGTCTTAAAGAACGCGTATTCAGAGCAAAGAGTGGGCTCTGTG
CGTCGCGTTACGTTGTTGAATGGTCCTTATGATGTGTGCTCATCATCAGT
AACGGTCGGCTGGATTCCCGAGAATTGGTAAGATGGAACCGCAACGGAAC
TGCACCATGGCGAACCTCACTTCTGTCAACTGCACGGCTTGGAATGTCAC
CACGGCACCGCCGCTTCCGTCCCTGCCTCTCATCTTCGGCACAGATTTTC
CTGCAAACGTTCCCCAGGTTAGTCATATACAACTAGGCTGGTCTTAACAA
CGTGGCATTGTGAACCAAGTGAATGCTAGCATGAAGAACCAGAGGTCGGC
GTCTACTGGGCATTTGTAAGCGTTGAAAGTCAACAAGCATTCAAACTTGT
CGCTCTATGGATGTCTTCCTTCTGTTGTGAACTAATCTATCTATAACATG
TCCATAACTATAATGCTGAGTGGAAGTTTATGTGCTAATTCTAGGTGGTG
TACTTACTGTTGGTCCTGATCCTGTGCTTGCTGGGAAACACCGCCGTGAT
CGGGACAGTGTGGCTGGACGAGCAGCTGCACGAACCGCCCAACCTCCTCC
TGACCGGACTCTGCGTAGCCGACATCTTGTACGACCTGCTCATCCTCCCT
GTCATGCTTAGTGAGCATTTTATTATCACCTTTTACTCGTGTCAACAATG
TGGCTACGAGGATAGAAGACACATGGATCAGGTTTATAGATATTTAACGT
TAATTGTAAAATCCCTTCCGCAATTAGTGTTACACTTTCCACAAAATCTT
TAATAAATTGTAAGTGGCAAATGTTCTAAATGTTGGCACATCGGCGACCA
AATCCGTAGGGTGTTTTTTTGCACACTTTTAGGCACATTAGCCAAAGAGG
CTCGGTGGGCGTCACTCCACCGCCAGGGAAGGTTGTGTGAAGTGCAACAA
CCGGCACAACCGACGCCACTTACAACATCTTTAGGATTAGGATTCTTTAG
GATACTACGCCAGTAGGATTGTGATATGTAGATGTCAAACGGTAAAGTGT
TATGCGCTCTGGCCCTTAGATGTACTGTTCATCCGACACTACACCTTTGG
ACAGACGGCGTGTGACATCATGGCCTTCTTCCACATCCTGTGCACGTTCT
TCTCCATGATGATGACCGGCGCCATTTCCTTCGAGCGGTACCACTTCATC
TGCCACCCAATGCAATATCACAGCAATTTCACAGGTAGCTTTATACGGGC
TAGATTCTACATTTCATTGCGAATATTTTCTTGTCTTTGACTCAAATTTG
TATCGCTGTCAGCAGGAGTGCATAGCTAATCAGCCGATGTTGTTTGAAGT
CAAAAGAACTCTTTCGTCGATAGAAAGGGACATCGAGGGGCGGGTATATG
TAGTATTGGGGTTTCAGGTGGATGTGATCATAATCATAAATTAGTGTACT
ACAATTTTCAACAGGCCGGCGGATTCTAGGTCTGCTGCTAGTGTGCTTGT
CAGGAGCCCTCCTGGTGGCCTGCTGTATGCTGCCGTTCCTGCGGTCAGAC
CCGCCCTTCTTCTTTCCCGCCCCCATGTACTGCGTCAGCCACGCGATAGC
GTCCGGGGTGGTGGGCTGGATGTTCTTCATGGCCGCTGGTTCTCTCGCTA
CATACTCCCAGGTAAGGCTGCATAGTGACTTGTAACGTCAGGCTCTGTCA
AGTTGGTGACAACTGCTAATAAATAGCTGAATTTACAGTGATGTAACGTT
ATATGTTGTTGTTCGTCCGTTGCTGTCAACGATGACCAACAGCATCACAA
CAGGTGTGGTGTGTCCGGCTGTAGTTCAATGTGGGCTCTTAAGTCTCCGC
CACAGGTCGGGCACAGGTGGGGAAGGGAAACTTTTTTTTAGTTTCGACGA
CCCTGTTTTGCTTATGCCTTTAGACAGTGACGTGACTTCGCCAGGCAGAG
CGGCCATGGGTTGTTGTTTCCCCAGAAATGTACGGTAATGCAGATTCAGA
CATTACTGCCACCTTTCCTTTCGGTGAGTTTGCCCACAACGGCAATGATC
TTTCTGGGTGCGTTACAGGTGCGGATCTACCTGGAGGCACGGCGGCACTT
ACGCGCCATCCAGGCAGGGAACATCAGCGGCCACTCCGCCGAGGACTTTC
GGAAGAAGATCAAGAGCGCAGTGACCACCACCGCAGTCGTGGCCATCTGG
TGGCTGTCTGAGTTCCCCCTCATCACCGTGGAGACCATTCTGGTCACGTG
AGTTTTTATCTGATAAAACCAAACTTGTCTGTCCATTCATGTAATGATTC
ATCGAAGTTATCAGTATAACGTTAGATTTAAAGTGACAAAAACTCGTTCA
TGATTTTGTATCATCAAGTTAATCAACGGTTAATTAACTTGATGATACAA
AATTATGAACAATTGCAAACAGAAGTATACAAGACTATAGAGATAGCCTG
GCTGTCATCTTACCAGTGTCAGTGGGTAGGTGGGACATGTGGAATTGCGT
TCGCTCTGATAGTCGCTAAAACTGAGAAAAACTGAGTCAGTGTGACAGCC
AGAATACATTTGAGATGCACTGGAATTGTGCATTGTACCTGACTGGCCTT
AAACAATATAATGTAGAATCCGTAATGTCTGACATGTTAACAGTTAATTG
TCATAGCTCTAGCTTCCCCAAGTTACCAGATTCGTAATGTCTCTACCGTG
GTTGGGAGGTTACTAATCCAGAGCCATTCGCAATTACCAACTTTGGACCC
TCATGATCAGTTGTCCTTATCATATCTGTTTACAAGTGTACAATCCCGAT
CTTGTGTTCTGTAGGGCACCGCACATGACCTCTGTCAGCTGGCAGGTGGC
GCACCGCGTCAGCCGGTTCGCCTACTTCATCTCAACCTGCAGCAACCCCA
TCGTGTTCGCCTTCAGGAACAGGCAGTTCCGCAGCGCCTTCAAGAAGCTG
CTGCGTCCCCGGGCGGTCCACAGCTTCAACTGAAAGTG Coding sequence (CDS) from alignment at Sc0000229:103363..107000- >BlTCONS00113534 ID=BlTCONS00113534|Name=BlTCONS00113534|organism=Branchiostoma lanceolatum|type=CDS|length=717bp|location=Sequence derived from alignment at Sc0000229:103363..107000- (Branchiostoma lanceolatum)
ATGCTTAATGTACTGTTCATCCGACACTACACCTTTGGACAGACGGCGTG
TGACATCATGGCCTTCTTCCACATCCTGTGCACGTTCTTCTCCATGATGA
TGACCGGCGCCATTTCCTTCGAGCGGTACCACTTCATCTGCCACCCAATG
CAATATCACAGCAATTTCACAGGCCGGCGGATTCTAGGTCTGCTGCTAGT
GTGCTTGTCAGGAGCCCTCCTGGTGGCCTGCTGTATGCTGCCGTTCCTGC
GGTCAGACCCGCCCTTCTTCTTTCCCGCCCCCATGTACTGCGTCAGCCAC
GCGATAGCGTCCGGGGTGGTGGGCTGGATGTTCTTCATGGCCGCTGGTTC
TCTCGCTACATACTCCCAGGTGCGGATCTACCTGGAGGCACGGCGGCACT
TACGCGCCATCCAGGCAGGGAACATCAGCGGCCACTCCGCCGAGGACTTT
CGGAAGAAGATCAAGAGCGCAGTGACCACCACCGCAGTCGTGGCCATCTG
GTGGCTGTCTGAGTTCCCCCTCATCACCGTGGAGACCATTCTGGTCACGG
CACCGCACATGACCTCTGTCAGCTGGCAGGTGGCGCACCGCGTCAGCCGG
TTCGCCTACTTCATCTCAACCTGCAGCAACCCCATCGTGTTCGCCTTCAG
GAACAGGCAGTTCCGCAGCGCCTTCAAGAAGCTGCTGCGTCCCCGGGCGG
TCCACAGCTTCAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113534-exon-Sc0000229-1564993656:105691..107000 | BlTCONS00113534-exon-Sc0000229-1564993656:105691..107000 | Branchiostoma lanceolatum | exon |
| BlTCONS00113534-exon-Sc0000229-1564993656:105117..105281 | BlTCONS00113534-exon-Sc0000229-1564993656:105117..105281 | Branchiostoma lanceolatum | exon |
| BlTCONS00113534-exon-Sc0000229-1564993656:104690..104886 | BlTCONS00113534-exon-Sc0000229-1564993656:104690..104886 | Branchiostoma lanceolatum | exon |
| BlTCONS00113534-exon-Sc0000229-1564993656:104104..104282 | BlTCONS00113534-exon-Sc0000229-1564993656:104104..104282 | Branchiostoma lanceolatum | exon |
| BlTCONS00113534-exon-Sc0000229-1564993656:103363..103536 | BlTCONS00113534-exon-Sc0000229-1564993656:103363..103536 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000229 | genome | Sc0000229:103363..107000 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055703 |
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