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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000229:63816..72704- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113521 ID=BlTCONS00113521|Name=BlTCONS00113521|organism=Branchiostoma lanceolatum|type=mRNA|length=8889bp|location=Sequence derived from alignment at Sc0000229:63816..72704- (Branchiostoma lanceolatum)
AACTCAGAAGTGCTGTTTCTCGCCGTGGCTTACGGAAGATAAAACAGACC
CCCGTTGGCCTCTGCAGCACTTGTGGTCCATGTGAGCTCTGAGAGGACAG
CAAGTGCAGCTCAACAGTCCGCCATTAGCACATGCTACCCCGTGCATCTC
TCCTCAAGTGGAACCACGCACGACTCTAACGTTCTATCCCCCAGGTAAAC
TATACTCTAACGTTATATTCATTCTTATGCTATGTTACCGTGAAAACCAA
TGCAATGTACAGATACAGGGACAACAAAGGTAAGAGAGCTATATATACTC
AATATGTACGTGTGTTACCATGAAAATGCAATCACAAAGCAAATTTGAAA
AGGTAACGAGCGATAGGGTAACAGCTTGCCAGATGCAGAGCTATATTAGC
TGTGTAGCCAATTGACTTTTCATTGCTGACGTCTGCTGGCAACGAATGCA
ATCACTACTGAGGGCAGCAAGTAGACTAGGGTTGTGTACCGTTGGCTCGC
TCTGTTGCAGCTGATGCAGGAAGAAAATACAGGCCGGATTCGGGCTTAGT
TCGAAAGGAGAACAACTTTAAGGTTGCAAGAAAGCAGCCATTTGTTCAGA
TTTAAAAAAGACATGTTAGCAGATGAATAGGGAGCCATTAACAGATAATA
ATGTACGCAATGGATTTCTGTGGGAGGCTTTAGTGAATGCTTCGTGGGCT
TTGTCTATCATTCTGAATGATCAATGCAATCATTTTCAAAACATTAACTA
TTTTCCTTTATTTCCTGATCTTTGTAGACCTCCCGTTATGTGCAGCTGTG
TATAAAGGTTATTCGTATAGCATAGGGAAGATGATGATTATAGGCAATGT
ATACCTTGGAATGCAGCTTCTTCCCTGTGAACATGATGAACATAGCCAAA
TTGTGATAATGTAATAGATTTCTTATTCTGTTTAAAGATATAAATCAAAT
ACAACGTCCTAATATCTGTACCAAAATAACCTGCCTTCGCTATGAGTGGC
TTTTCCTGACCTAAACGTAATTGACTTGTTGTCTTGGAAGAAACCGACGT
TTGGATGCTATTAAGACAGAAATCCCCGCGGACATTCTTGATAAAAGGCA
GCCCGGCAACCACGCCTAATATTGACATCGTCTTGTACCACAGCAAGCAA
TTCCCGCCGAGATTTTCTCACCCGACAAGCTGCAGCTCCTTGGCGATGGG
TACCTGGGGGCCAGACCCGTTACTGTGTTAATAGATAGCACAGATTGCTT
CGCCTTCTGAAGGACGAAACAAAAAAAACAAATTCAGACAAGTACGAGAT
TCTGGGACAAGCTGTACCTTTGTTGAATTTAAGTCAAGATCACAACATTT
TCATTTCGTGCGGGTTTCGTACCTTATACCTTTCCGTGGAATGACGTTGT
ATGACTAGGCTGAAATCTCAGCGCATAAATTGAAGAATCAGCCTTTTACA
TCCCGTTGTACAGTATAATAAAGAATCGTGCGATTCCTGTCAAAACAGAT
CAGAGTTGCTGTCAGATATTGCAGTTTTTTGTTGCAAAAATAGATTTAGA
TATCAAGGAGAAGAATGTTGGTTTACGTCCCCCTCTTCAATGTTAAATAT
TTTCGCGCTGTATAAGCTGGTGATGGCTTGCCGGAAGAACAATTTTGACA
GTGATTGGCGGTTTGACGCTAGAATACGTCAGAGCAAAAATTGCTTCAAT
AACGCTTGTTTTATGTCATCCATATGAATTGCCACGAAATGTGTTTTCGT
CTTCAGAAAACCAGTTTGGTGGCCACGAAGAAACGTTGACGTGGTTTATA
ATGGAAACATGATAGTGCACTGATTGAATGTGTCTAAGGCAATATCTCAG
AAGTTTATGTCTGAATTGTGAAGACACATGTAAACATGCCCTTTATCACC
TCCTGAAGGATGATGGTGTATACTGCGTGTTTGCTACTCAGACGTAAAGA
GAGCCGACTTTCGTCTGGTGAGCTCCAGGTGAAGCAGAATCTGAACTATC
GGGTTTGACATTTGCGACCTCTTTGGCATGTTTGCCATTACTTTCCAAGG
TAACAGCATTAGAATTGGAGGTGCATAGTCCTGATGTACATGTGTACATC
GATGAAAGGTCATAATGGAGACACATGTGTGGCTGTATCACGGGCGTCAA
ATTAATTTTTCCCGGTGCACTAATACATTTCCTCCGCTGAGCACCATGTT
CTTTGTCGCTCTGATGAAGAGAGCGTCCTGGTGATCGGATGTAGAAAACA
AGGGAAAAGTTAAAGCCATGTTCAATAGAGACAATACACCAAAATGAACA
TAAACTCTTCAATTCTAACCCGACTACTCAAACACAAGCGGCGTTTGGGT
GATATGTTCAGCGTTTGTAAATGTTGCACAATTTCGTCCCACAATTCAGC
ACCAAGGACAGGACTAATCTGCTCCTCCTGTCACTTGAATTGATTAAATA
AAAATATTTAGATATTGCATGTATTAAATTATCATTTTCTAGAGTAGTGA
ATTTCATCCAACACAACCCTTGTATTCTGTTGCGTGACAATTAGTTTATT
TCTACCATTATGCATTAACGAAATCTTCGCAGCGTTTCCACTCAGAGCTC
CCCGTCACATCTTGTCTCCATTGGCTGCCGGCAGATCTGATTAGTCTCGT
TTGTATCGTCCTGCGTACTTTACCTACCAAATCAACGGGGATAGGCAATA
TTTGACTCAGCGATTGATTGCGATACCAGTTTCTTCTCCACGGGAACAAT
ATACGTCATTACTTACATAAATCTTTGATCTTACATTTTGACACTTGCGC
CCGTCTTCAGTCTAAGCTCTGTCGGGGTCACCTCTGTGAGTGACGTAACG
TTTTCACTCATTTCCATTGGTTATGGAATCAACCTACGAGCAAAAAACTA
TCAGGGAAACATGACGATCTTCTTTCTCCGAATCCGTCAAGATATTTGGG
GATGGGTTGCCATGCCGGCCTGAGTGACGTAACGTTTTTACTCATTTCCA
TTAGCTATGGAATCAACCTACGAGAAAAAAAACTATCAGGGAAACATGAC
GATCTTCTTTCTCCGAATCCGTCAAGATATTTGGGGATGGGTTGCCATAT
GCCGGTCGGTGATACCGATAGACTCAAAGACTGAGCGAGTTACGCAAATG
GAGATTTGAGCTGAACTACTCAGTTTGAAGGTAGTCTTTGATAGACAAGC
ACACTGACAGGGGATGCTGATAGACATATTAATTATCACACAAAGTGGGT
CATCAAAGTACAACAAATCCTGATAAAGACTGCAGCCATTCATCACATGC
AATGCCGGTCAGAACAGCATTGCCCCGTTTTTCATAGCAAATGTACGCTT
CAAGTAATACTAGTAGCTCCCTGGTGGGTTTTTTTTTTCAATTTTGTTTT
AAACGCATGTCCGTGGAAAAGTATTGAGTATTTCCTAGCATTATTTTCCT
AGCTACATCCAAAATGCCAGCGGCTACACTGACTAGTACTGTTCACATTT
GCGGTATCCAACAAGGTTGCAGAGCTTATTTATTTCCCCACAATGGGTAG
TTTTCTTGTGATGGAGTCTTTAAAGAGGACGGGGAGTCTTTCTACGCACA
GTTGTTAAATTCTCAATTTTCCTAGTTGTCATAAGCCTACTTGAGAGTTT
GCAGAATGCTTCAGGTTGTGCGAAAGGATCAAATTAAAGATAGTCACGTA
TGTTTCTTGCTTTTCTCCTCCAACAGGAAGCCGTTCAGACCTTTTATAGA
ATTGAAAACCCGTTCATGTCCGTGTTCCTGTTGATTTAGTATCATATTAC
AGCTAAACGCAACTGCATGTGTCTACTTAAGAGCACATAAGAAGGATAAA
CTGCTTCAGTCCGCCTCGCTGGAAGTGCTCACCGAGTGAAAATCNACTGC
TTCAGTCCGCCTCACTGGGAGTGCTCACCGAGGGAAAATCGGATTGCCAT
TGACTGCAAAGTCACGTTGTCTTGCCGATTAAGTACATGAGGATTTTGCA
TACGTGCCTGTAAAGGTCACTTTACTTAAGGAGCACTTTGATGAAGGGAT
ATGCCATCATCACTTTAGTGATGGTGGAAAATGCAGCACTAGCGTAAGGA
TTGTGCAGCGTAGGAAGTAAATGAGTACTGAGCAGCTGGATGCATTCAAT
TAGGATTCTTTTAGATAAAAAACATCGATCTTAAAATGCTTCATAGCCAT
GTAAAATATAAAAATCTCGAGAACTGTACTGTACAAATGATTGACAGGAA
ATGTCCTGAAACATATATAATTGTTGTAGGATGGAGAACAGTTCACTGCT
CTACCATGTATTGCCGTCCCTCCCCTGGTCCTTCCAACCAACTTTCGATT
GGCATTACTCCACCATCAGACCGACATGGGTAATGGAGGCGCGAATTACA
CAAAAAATACATTTTCATTACTTAACACATATGTATCTTTTAAACAAATG
GCTATGCTTATTCTCTTCACCCTCTCGGCTTGAAAACACCAGAGACATAG
TGGTAAAATAACAAAACTTAAGGAAAAGGTGAGGAGATAAATTTGCACTT
GTTGTAAACCAAACGCTGGCTTCAAATCCCAGACTCGGATTTTTCCCCAG
TGGAAAGCTATGAAAGCAATTTGATATATATACATACATTTACTACTGTA
CTTATGGCAACCTCTATCACACCCGCATTAATTCACTAGGAACTACTCAG
TCGGTAAGAACCAATATATTTTATGTCCACCTGCCGGTTAAAGTTTGATT
CATTGCCCAGATTTTAGTTGTACTCCCCACAGGGCCTTACGTTTTTCCCA
TGTTTTATTTTCTACTGGAAGTCATTTTTCAAGTATTCGCGATGTGCCGA
AGCCATTAGTATTCTCCAGCCTTCTCCCAAAATGCCTCTGTGGAGTGATA
TATTTCTAGCCTCCAGGTCCCGTATAGCCCATACGTCACGTCCCTTGCAA
CTATCTCCCTTCACACATGTCCCCCTAAGTGCTGACAGGCCGCAACGGTG
CAAATAACGTCTTTTGAAGAAGCGAGCACTGCCAAGTTATATGAAAGGTA
CTATGTGCACTCCGGTAGTCACGTGGGTGCATTTTTATGAGCACAGTCTG
TCTTATCGCATCTGCCACGCCTCCGTACGCCTGCACCTGTCGGTTGCTGT
AACCCCGGTAATGACATTACCGACAACGTTAAGCGATTCCTCGGCTGAAT
GGTGCAATGTTAAACCCCCTATAGTTTGCAGGATGATAATGATTTCCATT
GTGGTGGGGATTCAATGCCGGGAACTGCGCTGTGCAAATTACTTGATGAT
GCGATGTGCGCTGTTTTTCTCTAACATCAGTCGCTGTCAAACACAAACAC
AAACGCACAAAGAAATGCTTTAACCCTGTCAACAATTAACAATGGTGTAG
GAAAATGTAAGCACGGGCGTCCATACAAAGCAATAAGTCTGTATTTGCTT
GTTTGCTTGCTCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNCGATGTGCCGAAGCCATTAGTATTCTC
CAGCCTTCTCCCAAAATGCCTCTGTGGAGTGATATATTTCTAGCCTCCAG
GTCCCGTATAGCCCATACGTCACGTCCCTTGCAACTATCTCCCTTCACAC
ATGTCCCCCTAAGTGCTGACAGGCCGCAACGGTGCAAATAACGTCTTTTG
AAGAAGCGAGCACTGCCAAGTTATATGAAAGGTACTATGTGCACTCCGGT
AGTCACGTGGGTGCATTTTTATGAGCACAGTCTGTCTTATCGCATCTGCC
ACGCCTCCGTACGCCTGCACCTGTCGGTTGCTGTAACCCCGGTAATGACA
TTACCGACAACGTTAAGCGATTCCTCGGCTGAATGGTGCAATGTTAAACC
CCCTATAGTTTCCAGGATGATAATGACTTCCATTGTGGTGGGGATTCAAT
GCCGGGAACTGCGCTGTGCAAATTACTTGATGATGCGATGTGCGCTGTTT
TTCTCTAACATCAGTCGCTGTCAAACACAAACACAAACGCACAAAGAAAT
GATTTAACTCTGTCAACAATTAATGGTGTAGGAAAATGTAAGCACGGGCG
TCCATGAAAAAGCAATAAGTCTGTATTTTCTTGTTTGCTTGTTTTCCCCC
CACAAATTGTATCATGTGTTTCATTAAATTGAATGCATCGCTTCAATAGA
CAAGCGTCCTTGGCGTATACATATATAATTGCTTTTATGTCTGTTACATA
TTGGAGAGGTTGATGCCATATGATGTTGGCACATGTGATATTGTTTACCA
TATATCGATCCGACACACCGCAGGACGAAACGAGACTGGGCGGAGCGAGG
TAATACCATCTATAACTGATATACCCATGTAACACATTTCTCTTGTGCGC
ACATCATGCCATTTAAGCGAGCGTGGGCGCCGTATTTTTTACTCCATGGG
GACCGACTGTGGGCGTCAGTTGTCTAGGTACCGCATTACAAGAATCACAT
GTTTTACTTTCGGAAACACCAAATACATCTCCCACCCACACGTGACAGCG
AGTCTTGATAATCCTGCTCCTTACGCCTGCAGCATTTAGACGTGAGGAAA
CATATTATTGCAGCCGCAAGGAAGTAGGGTAATGGGCATAACGATTGGAT
AGGTACCTCCCGAGGAAAACGGATTCCGGGGTTGTACATTACACGTGGTA
AATAGTCATAGATTTCAATCAACGGCCTTCGACTCAAACACATCTCTTTG
CCATATTTCAGAGCTGACGACTTGCTAAGGCACATCAGGGGAAGCTTGCA
ACATGGTGGACTGCGGCCCCTCCTCAGTGCCGTACCCGGGGTTCCAACCT
ACGTCTGGGGTGAGCGAAGAACTATTCACAGACAGCGGCATGTCCCTGAG
CACTGCTGTATGGGTTAACATCACAGAGACAACCGATAGGAAGGAAGAAG
ACACCCCTAAATACGCCCTGCTGGTAGTGCTTGTACTGATCTCTCTAGCC
ACTGTAGTGGGGAATGTGATGGTGCTGGTGGCTCTGGTGCGGGAGAAGAT
GCTGCGGACGGTTTATAACTACTTCATCCTGAATCTCGCCTTGGCTGATC
TGTGTGTGGGGCTGGTCATCATGCCCCTGTTCGCCACCTACGTCAGTCTC
GGCAACTGGCCGTTCGGATCCGCGATGTGTGTCCTCTGGGTGCTGATGGA
TTTTGGCTGCTGCCAGGTCTCCATCTTCACGCTCCTCCTCATAGCAGGGG
ATAGATACTGCAGCATCCGGTGGCCCACAACGTATGTAGCCCGACGGACT
GCTCAACGTACTATCCCGGTCGTCTTCCTCACTTGGGTGGTGGCTGCTAC
AATCTGGGCGCCAGGCGTGGCGACCTCCTTGGCCAGTGATGCCAAGCAGT
GCATGCTGAAACCTTCTGCCAACATTGCCTTCACCGTGACTTCAGCAATG
CTATCGTATCACCTACCTGTAGTGTCTATCGTTGCCCTTTACAGTCGTAT
GACAGTCTTGCTGATCCGGAAGATGAAAAGTAAGCATGCAAAACGTAAGA
TAGTGCCGATGGATATGCCAAACAGCATAAGCAAGGTAAGTGGACACGCC
GAGGCCCTGCCGGGAACTTCAAACCCCAGTCGTTCTCAATCCCATCGGAT
AAACCCTCAAGGTGTCCTTAGGAAAACGGTGTCATTTTCCTTGGAACAGA
AGTGTACGAATGCTCATGTCGTGGACGATTCTTCTTTGGGGGATCCTGAC
ATCGATATGGACACTTCTTCCGTGTTGGACTCGTATTTAAAAGACCTAAA
GCTGCCCGGCCAGGTATCACCAAAGTTACAACAAGGCAAACAACCTCTAA
CTGTAAACGAGAACGGATGGTGCTGTTTGTGGCAACCATTTTGCAATGGA
ATAGTGCCGTTGGATGTTGAGTGGGAAAATGCAGGATCACGGCGTAGCAG
CACTGTAAGCACGCAAAGCTTTCGTCGAAACGTCCGACAAAGTAGCCACT
TGGGGGAGAGAAGAGAGATGCGTGCCGTGAGGACCCTTGCCGTAGTATCG
GTAGTCTTTTTGATCTGTTGGACCCCATTTATCACCATGTACCTTGTTAT
TGCCGCGTGTCCAGCATGCATCAGTAGCACGGCTTTTAACGTGTCCTATT
GGATGGCCTACATAAACTCTGGTCTGAACCCCATCGTCTACAGCCTCCTC
AGCCCGGAGTTTAGGAAGGCCTTCAAGAAGGTCCTACGAATCGGCTCCAG
GGCTCCTAGTCAAGCTGGACGCCAGTCAACCCTTCAAGCTGGATAAACCA
AGCGTATGGCGCACGGTTCTGCTCAGCTAAGATATCTAG Coding sequence (CDS) from alignment at Sc0000229:63816..72704- >BlTCONS00113521 ID=BlTCONS00113521|Name=BlTCONS00113521|organism=Branchiostoma lanceolatum|type=CDS|length=1494bp|location=Sequence derived from alignment at Sc0000229:63816..72704- (Branchiostoma lanceolatum)
ATGGTGGACTGCGGCCCCTCCTCAGTGCCGTACCCGGGGTTCCAACCTAC
GTCTGGGGTGAGCGAAGAACTATTCACAGACAGCGGCATGTCCCTGAGCA
CTGCTGTATGGGTTAACATCACAGAGACAACCGATAGGAAGGAAGAAGAC
ACCCCTAAATACGCCCTGCTGGTAGTGCTTGTACTGATCTCTCTAGCCAC
TGTAGTGGGGAATGTGATGGTGCTGGTGGCTCTGGTGCGGGAGAAGATGC
TGCGGACGGTTTATAACTACTTCATCCTGAATCTCGCCTTGGCTGATCTG
TGTGTGGGGCTGGTCATCATGCCCCTGTTCGCCACCTACGTCAGTCTCGG
CAACTGGCCGTTCGGATCCGCGATGTGTGTCCTCTGGGTGCTGATGGATT
TTGGCTGCTGCCAGGTCTCCATCTTCACGCTCCTCCTCATAGCAGGGGAT
AGATACTGCAGCATCCGGTGGCCCACAACGTATGTAGCCCGACGGACTGC
TCAACGTACTATCCCGGTCGTCTTCCTCACTTGGGTGGTGGCTGCTACAA
TCTGGGCGCCAGGCGTGGCGACCTCCTTGGCCAGTGATGCCAAGCAGTGC
ATGCTGAAACCTTCTGCCAACATTGCCTTCACCGTGACTTCAGCAATGCT
ATCGTATCACCTACCTGTAGTGTCTATCGTTGCCCTTTACAGTCGTATGA
CAGTCTTGCTGATCCGGAAGATGAAAAGTAAGCATGCAAAACGTAAGATA
GTGCCGATGGATATGCCAAACAGCATAAGCAAGGTAAGTGGACACGCCGA
GGCCCTGCCGGGAACTTCAAACCCCAGTCGTTCTCAATCCCATCGGATAA
ACCCTCAAGGTGTCCTTAGGAAAACGGTGTCATTTTCCTTGGAACAGAAG
TGTACGAATGCTCATGTCGTGGACGATTCTTCTTTGGGGGATCCTGACAT
CGATATGGACACTTCTTCCGTGTTGGACTCGTATTTAAAAGACCTAAAGC
TGCCCGGCCAGGTATCACCAAAGTTACAACAAGGCAAACAACCTCTAACT
GTAAACGAGAACGGATGGTGCTGTTTGTGGCAACCATTTTGCAATGGAAT
AGTGCCGTTGGATGTTGAGTGGGAAAATGCAGGATCACGGCGTAGCAGCA
CTGTAAGCACGCAAAGCTTTCGTCGAAACGTCCGACAAAGTAGCCACTTG
GGGGAGAGAAGAGAGATGCGTGCCGTGAGGACCCTTGCCGTAGTATCGGT
AGTCTTTTTGATCTGTTGGACCCCATTTATCACCATGTACCTTGTTATTG
CCGCGTGTCCAGCATGCATCAGTAGCACGGCTTTTAACGTGTCCTATTGG
ATGGCCTACATAAACTCTGGTCTGAACCCCATCGTCTACAGCCTCCTCAG
CCCGGAGTTTAGGAAGGCCTTCAAGAAGGTCCTACGAATCGGCTCCAGGG
CTCCTAGTCAAGCTGGACGCCAGTCAACCCTTCAAGCTGGATAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113521-exon-Sc0000229-1564993656:72511..72704 | BlTCONS00113521-exon-Sc0000229-1564993656:72511..72704 | Branchiostoma lanceolatum | exon |
| BlTCONS00113521-exon-Sc0000229-1564993656:63816..65393 | BlTCONS00113521-exon-Sc0000229-1564993656:63816..65393 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000229 | genome | Sc0000229:63816..72704 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055699 |
|
