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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000229:63816..72536- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113520 ID=BlTCONS00113520|Name=BlTCONS00113520|organism=Branchiostoma lanceolatum|type=mRNA|length=8721bp|location=Sequence derived from alignment at Sc0000229:63816..72536- (Branchiostoma lanceolatum)
CACGACTCTAACGTTCTATCCCCCAGGTAAACTATACTCTAACGTTATAT
TCATTCTTATGCTATGTTACCGTGAAAACCAATGCAATGTACAGATACAG
GGACAACAAAGGTAAGAGAGCTATATATACTCAATATGTACGTGTGTTAC
CATGAAAATGCAATCACAAAGCAAATTTGAAAAGGTAACGAGCGATAGGG
TAACAGCTTGCCAGATGCAGAGCTATATTAGCTGTGTAGCCAATTGACTT
TTCATTGCTGACGTCTGCTGGCAACGAATGCAATCACTACTGAGGGCAGC
AAGTAGACTAGGGTTGTGTACCGTTGGCTCGCTCTGTTGCAGCTGATGCA
GGAAGAAAATACAGGCCGGATTCGGGCTTAGTTCGAAAGGAGAACAACTT
TAAGGTTGCAAGAAAGCAGCCATTTGTTCAGATTTAAAAAAGACATGTTA
GCAGATGAATAGGGAGCCATTAACAGATAATAATGTACGCAATGGATTTC
TGTGGGAGGCTTTAGTGAATGCTTCGTGGGCTTTGTCTATCATTCTGAAT
GATCAATGCAATCATTTTCAAAACATTAACTATTTTCCTTTATTTCCTGA
TCTTTGTAGACCTCCCGTTATGTGCAGCTGTGTATAAAGGTTATTCGTAT
AGCATAGGGAAGATGATGATTATAGGCAATGTATACCTTGGAATGCAGCT
TCTTCCCTGTGAACATGATGAACATAGCCAAATTGTGATAATGTAATAGA
TTTCTTATTCTGTTTAAAGATATAAATCAAATACAACGTCCTAATATCTG
TACCAAAATAACCTGCCTTCGCTATGAGTGGCTTTTCCTGACCTAAACGT
AATTGACTTGTTGTCTTGGAAGAAACCGACGTTTGGATGCTATTAAGACA
GAAATCCCCGCGGACATTCTTGATAAAAGGCAGCCCGGCAACCACGCCTA
ATATTGACATCGTCTTGTACCACAGCAAGCAATTCCCGCCGAGATTTTCT
CACCCGACAAGCTGCAGCTCCTTGGCGATGGGTACCTGGGGGCCAGACCC
GTTACTGTGTTAATAGATAGCACAGATTGCTTCGCCTTCTGAAGGACGAA
ACAAAAAAAACAAATTCAGACAAGTACGAGATTCTGGGACAAGCTGTACC
TTTGTTGAATTTAAGTCAAGATCACAACATTTTCATTTCGTGCGGGTTTC
GTACCTTATACCTTTCCGTGGAATGACGTTGTATGACTAGGCTGAAATCT
CAGCGCATAAATTGAAGAATCAGCCTTTTACATCCCGTTGTACAGTATAA
TAAAGAATCGTGCGATTCCTGTCAAAACAGATCAGAGTTGCTGTCAGATA
TTGCAGTTTTTTGTTGCAAAAATAGATTTAGATATCAAGGAGAAGAATGT
TGGTTTACGTCCCCCTCTTCAATGTTAAATATTTTCGCGCTGTATAAGCT
GGTGATGGCTTGCCGGAAGAACAATTTTGACAGTGATTGGCGGTTTGACG
CTAGAATACGTCAGAGCAAAAATTGCTTCAATAACGCTTGTTTTATGTCA
TCCATATGAATTGCCACGAAATGTGTTTTCGTCTTCAGAAAACCAGTTTG
GTGGCCACGAAGAAACGTTGACGTGGTTTATAATGGAAACATGATAGTGC
ACTGATTGAATGTGTCTAAGGCAATATCTCAGAAGTTTATGTCTGAATTG
TGAAGACACATGTAAACATGCCCTTTATCACCTCCTGAAGGATGATGGTG
TATACTGCGTGTTTGCTACTCAGACGTAAAGAGAGCCGACTTTCGTCTGG
TGAGCTCCAGGTGAAGCAGAATCTGAACTATCGGGTTTGACATTTGCGAC
CTCTTTGGCATGTTTGCCATTACTTTCCAAGGTAACAGCATTAGAATTGG
AGGTGCATAGTCCTGATGTACATGTGTACATCGATGAAAGGTCATAATGG
AGACACATGTGTGGCTGTATCACGGGCGTCAAATTAATTTTTCCCGGTGC
ACTAATACATTTCCTCCGCTGAGCACCATGTTCTTTGTCGCTCTGATGAA
GAGAGCGTCCTGGTGATCGGATGTAGAAAACAAGGGAAAAGTTAAAGCCA
TGTTCAATAGAGACAATACACCAAAATGAACATAAACTCTTCAATTCTAA
CCCGACTACTCAAACACAAGCGGCGTTTGGGTGATATGTTCAGCGTTTGT
AAATGTTGCACAATTTCGTCCCACAATTCAGCACCAAGGACAGGACTAAT
CTGCTCCTCCTGTCACTTGAATTGATTAAATAAAAATATTTAGATATTGC
ATGTATTAAATTATCATTTTCTAGAGTAGTGAATTTCATCCAACACAACC
CTTGTATTCTGTTGCGTGACAATTAGTTTATTTCTACCATTATGCATTAA
CGAAATCTTCGCAGCGTTTCCACTCAGAGCTCCCCGTCACATCTTGTCTC
CATTGGCTGCCGGCAGATCTGATTAGTCTCGTTTGTATCGTCCTGCGTAC
TTTACCTACCAAATCAACGGGGATAGGCAATATTTGACTCAGCGATTGAT
TGCGATACCAGTTTCTTCTCCACGGGAACAATATACGTCATTACTTACAT
AAATCTTTGATCTTACATTTTGACACTTGCGCCCGTCTTCAGTCTAAGCT
CTGTCGGGGTCACCTCTGTGAGTGACGTAACGTTTTCACTCATTTCCATT
GGTTATGGAATCAACCTACGAGCAAAAAACTATCAGGGAAACATGACGAT
CTTCTTTCTCCGAATCCGTCAAGATATTTGGGGATGGGTTGCCATGCCGG
CCTGAGTGACGTAACGTTTTTACTCATTTCCATTAGCTATGGAATCAACC
TACGAGAAAAAAAACTATCAGGGAAACATGACGATCTTCTTTCTCCGAAT
CCGTCAAGATATTTGGGGATGGGTTGCCATATGCCGGTCGGTGATACCGA
TAGACTCAAAGACTGAGCGAGTTACGCAAATGGAGATTTGAGCTGAACTA
CTCAGTTTGAAGGTAGTCTTTGATAGACAAGCACACTGACAGGGGATGCT
GATAGACATATTAATTATCACACAAAGTGGGTCATCAAAGTACAACAAAT
CCTGATAAAGACTGCAGCCATTCATCACATGCAATGCCGGTCAGAACAGC
ATTGCCCCGTTTTTCATAGCAAATGTACGCTTCAAGTAATACTAGTAGCT
CCCTGGTGGGTTTTTTTTTTCAATTTTGTTTTAAACGCATGTCCGTGGAA
AAGTATTGAGTATTTCCTAGCATTATTTTCCTAGCTACATCCAAAATGCC
AGCGGCTACACTGACTAGTACTGTTCACATTTGCGGTATCCAACAAGGTT
GCAGAGCTTATTTATTTCCCCACAATGGGTAGTTTTCTTGTGATGGAGTC
TTTAAAGAGGACGGGGAGTCTTTCTACGCACAGTTGTTAAATTCTCAATT
TTCCTAGTTGTCATAAGCCTACTTGAGAGTTTGCAGAATGCTTCAGGTTG
TGCGAAAGGATCAAATTAAAGATAGTCACGTATGTTTCTTGCTTTTCTCC
TCCAACAGGAAGCCGTTCAGACCTTTTATAGAATTGAAAACCCGTTCATG
TCCGTGTTCCTGTTGATTTAGTATCATATTACAGCTAAACGCAACTGCAT
GTGTCTACTTAAGAGCACATAAGAAGGATAAACTGCTTCAGTCCGCCTCG
CTGGAAGTGCTCACCGAGTGAAAATCNACTGCTTCAGTCCGCCTCACTGG
GAGTGCTCACCGAGGGAAAATCGGATTGCCATTGACTGCAAAGTCACGTT
GTCTTGCCGATTAAGTACATGAGGATTTTGCATACGTGCCTGTAAAGGTC
ACTTTACTTAAGGAGCACTTTGATGAAGGGATATGCCATCATCACTTTAG
TGATGGTGGAAAATGCAGCACTAGCGTAAGGATTGTGCAGCGTAGGAAGT
AAATGAGTACTGAGCAGCTGGATGCATTCAATTAGGATTCTTTTAGATAA
AAAACATCGATCTTAAAATGCTTCATAGCCATGTAAAATATAAAAATCTC
GAGAACTGTACTGTACAAATGATTGACAGGAAATGTCCTGAAACATATAT
AATTGTTGTAGGATGGAGAACAGTTCACTGCTCTACCATGTATTGCCGTC
CCTCCCCTGGTCCTTCCAACCAACTTTCGATTGGCATTACTCCACCATCA
GACCGACATGGGTAATGGAGGCGCGAATTACACAAAAAATACATTTTCAT
TACTTAACACATATGTATCTTTTAAACAAATGGCTATGCTTATTCTCTTC
ACCCTCTCGGCTTGAAAACACCAGAGACATAGTGGTAAAATAACAAAACT
TAAGGAAAAGGTGAGGAGATAAATTTGCACTTGTTGTAAACCAAACGCTG
GCTTCAAATCCCAGACTCGGATTTTTCCCCAGTGGAAAGCTATGAAAGCA
ATTTGATATATATACATACATTTACTACTGTACTTATGGCAACCTCTATC
ACACCCGCATTAATTCACTAGGAACTACTCAGTCGGTAAGAACCAATATA
TTTTATGTCCACCTGCCGGTTAAAGTTTGATTCATTGCCCAGATTTTAGT
TGTACTCCCCACAGGGCCTTACGTTTTTCCCATGTTTTATTTTCTACTGG
AAGTCATTTTTCAAGTATTCGCGATGTGCCGAAGCCATTAGTATTCTCCA
GCCTTCTCCCAAAATGCCTCTGTGGAGTGATATATTTCTAGCCTCCAGGT
CCCGTATAGCCCATACGTCACGTCCCTTGCAACTATCTCCCTTCACACAT
GTCCCCCTAAGTGCTGACAGGCCGCAACGGTGCAAATAACGTCTTTTGAA
GAAGCGAGCACTGCCAAGTTATATGAAAGGTACTATGTGCACTCCGGTAG
TCACGTGGGTGCATTTTTATGAGCACAGTCTGTCTTATCGCATCTGCCAC
GCCTCCGTACGCCTGCACCTGTCGGTTGCTGTAACCCCGGTAATGACATT
ACCGACAACGTTAAGCGATTCCTCGGCTGAATGGTGCAATGTTAAACCCC
CTATAGTTTGCAGGATGATAATGATTTCCATTGTGGTGGGGATTCAATGC
CGGGAACTGCGCTGTGCAAATTACTTGATGATGCGATGTGCGCTGTTTTT
CTCTAACATCAGTCGCTGTCAAACACAAACACAAACGCACAAAGAAATGC
TTTAACCCTGTCAACAATTAACAATGGTGTAGGAAAATGTAAGCACGGGC
GTCCATACAAAGCAATAAGTCTGTATTTGCTTGTTTGCTTGCTCCCCCCC
CCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNCGATGTGCCGAAGCCATTAGTATTCTCCAGCCTTCTCCCAAAATG
CCTCTGTGGAGTGATATATTTCTAGCCTCCAGGTCCCGTATAGCCCATAC
GTCACGTCCCTTGCAACTATCTCCCTTCACACATGTCCCCCTAAGTGCTG
ACAGGCCGCAACGGTGCAAATAACGTCTTTTGAAGAAGCGAGCACTGCCA
AGTTATATGAAAGGTACTATGTGCACTCCGGTAGTCACGTGGGTGCATTT
TTATGAGCACAGTCTGTCTTATCGCATCTGCCACGCCTCCGTACGCCTGC
ACCTGTCGGTTGCTGTAACCCCGGTAATGACATTACCGACAACGTTAAGC
GATTCCTCGGCTGAATGGTGCAATGTTAAACCCCCTATAGTTTCCAGGAT
GATAATGACTTCCATTGTGGTGGGGATTCAATGCCGGGAACTGCGCTGTG
CAAATTACTTGATGATGCGATGTGCGCTGTTTTTCTCTAACATCAGTCGC
TGTCAAACACAAACACAAACGCACAAAGAAATGATTTAACTCTGTCAACA
ATTAATGGTGTAGGAAAATGTAAGCACGGGCGTCCATGAAAAAGCAATAA
GTCTGTATTTTCTTGTTTGCTTGTTTTCCCCCCACAAATTGTATCATGTG
TTTCATTAAATTGAATGCATCGCTTCAATAGACAAGCGTCCTTGGCGTAT
ACATATATAATTGCTTTTATGTCTGTTACATATTGGAGAGGTTGATGCCA
TATGATGTTGGCACATGTGATATTGTTTACCATATATCGATCCGACACAC
CGCAGGACGAAACGAGACTGGGCGGAGCGAGGTAATACCATCTATAACTG
ATATACCCATGTAACACATTTCTCTTGTGCGCACATCATGCCATTTAAGC
GAGCGTGGGCGCCGTATTTTTTACTCCATGGGGACCGACTGTGGGCGTCA
GTTGTCTAGGTACCGCATTACAAGAATCACATGTTTTACTTTCGGAAACA
CCAAATACATCTCCCACCCACACGTGACAGCGAGTCTTGATAATCCTGCT
CCTTACGCCTGCAGCATTTAGACGTGAGGAAACATATTATTGCAGCCGCA
AGGAAGTAGGGTAATGGGCATAACGATTGGATAGGTACCTCCCGAGGAAA
ACGGATTCCGGGGTTGTACATTACACGTGGTAAATAGTCATAGATTTCAA
TCAACGGCCTTCGACTCAAACACATCTCTTTGCCATATTTCAGAGCTGAC
GACTTGCTAAGGCACATCAGGGGAAGCTTGCAACATGGTGGACTGCGGCC
CCTCCTCAGTGCCGTACCCGGGGTTCCAACCTACGTCTGGGGTGAGCGAA
GAACTATTCACAGACAGCGGCATGTCCCTGAGCACTGCTGTATGGGTTAA
CATCACAGAGACAACCGATAGGAAGGAAGAAGACACCCCTAAATACGCCC
TGCTGGTAGTGCTTGTACTGATCTCTCTAGCCACTGTAGTGGGGAATGTG
ATGGTGCTGGTGGCTCTGGTGCGGGAGAAGATGCTGCGGACGGTTTATAA
CTACTTCATCCTGAATCTCGCCTTGGCTGATCTGTGTGTGGGGCTGGTCA
TCATGCCCCTGTTCGCCACCTACGTCAGTCTCGGCAACTGGCCGTTCGGA
TCCGCGATGTGTGTCCTCTGGGTGCTGATGGATTTTGGCTGCTGCCAGGT
CTCCATCTTCACGCTCCTCCTCATAGCAGGGGATAGATACTGCAGCATCC
GGTGGCCCACAACGTATGTAGCCCGACGGACTGCTCAACGTACTATCCCG
GTCGTCTTCCTCACTTGGGTGGTGGCTGCTACAATCTGGGCGCCAGGCGT
GGCGACCTCCTTGGCCAGTGATGCCAAGCAGTGCATGCTGAAACCTTCTG
CCAACATTGCCTTCACCGTGACTTCAGCAATGCTATCGTATCACCTACCT
GTAGTGTCTATCGTTGCCCTTTACAGTCGTATGACAGTCTTGCTGATCCG
GAAGATGAAAAGTAAGCATGCAAAACGTAAGATAGTGCCGATGGATATGC
CAAACAGCATAAGCAAGGTAAGTGGACACGCCGAGGCCCTGCCGGGAACT
TCAAACCCCAGTCGTTCTCAATCCCATCGGATAAACCCTCAAGGTGTCCT
TAGGAAAACGGTGTCATTTTCCTTGGAACAGAAGTGTACGAATGCTCATG
TCGTGGACGATTCTTCTTTGGGGGATCCTGACATCGATATGGACACTTCT
TCCGTGTTGGACTCGTATTTAAAAGACCTAAAGCTGCCCGGCCAGGTATC
ACCAAAGTTACAACAAGGCAAACAACCTCTAACTGTAAACGAGAACGGAT
GGTGCTGTTTGTGGCAACCATTTTGCAATGGAATAGTGCCGTTGGATGTT
GAGTGGGAAAATGCAGGATCACGGCGTAGCAGCACTGTAAGCACGCAAAG
CTTTCGTCGAAACGTCCGACAAAGTAGCCACTTGGGGGAGAGAAGAGAGA
TGCGTGCCGTGAGGACCCTTGCCGTAGTATCGGTAGTCTTTTTGATCTGT
TGGACCCCATTTATCACCATGTACCTTGTTATTGCCGCGTGTCCAGCATG
CATCAGTAGCACGGCTTTTAACGTGTCCTATTGGATGGCCTACATAAACT
CTGGTCTGAACCCCATCGTCTACAGCCTCCTCAGCCCGGAGTTTAGGAAG
GCCTTCAAGAAGGTCCTACGAATCGGCTCCAGGGCTCCTAGTCAAGCTGG
ACGCCAGTCAACCCTTCAAGCTGGATAAACCAAGCGTATGGCGCACGGTT
CTGCTCAGCTAAGATATCTAG Coding sequence (CDS) from alignment at Sc0000229:63816..72536- >BlTCONS00113520 ID=BlTCONS00113520|Name=BlTCONS00113520|organism=Branchiostoma lanceolatum|type=CDS|length=1494bp|location=Sequence derived from alignment at Sc0000229:63816..72536- (Branchiostoma lanceolatum)
ATGGTGGACTGCGGCCCCTCCTCAGTGCCGTACCCGGGGTTCCAACCTAC
GTCTGGGGTGAGCGAAGAACTATTCACAGACAGCGGCATGTCCCTGAGCA
CTGCTGTATGGGTTAACATCACAGAGACAACCGATAGGAAGGAAGAAGAC
ACCCCTAAATACGCCCTGCTGGTAGTGCTTGTACTGATCTCTCTAGCCAC
TGTAGTGGGGAATGTGATGGTGCTGGTGGCTCTGGTGCGGGAGAAGATGC
TGCGGACGGTTTATAACTACTTCATCCTGAATCTCGCCTTGGCTGATCTG
TGTGTGGGGCTGGTCATCATGCCCCTGTTCGCCACCTACGTCAGTCTCGG
CAACTGGCCGTTCGGATCCGCGATGTGTGTCCTCTGGGTGCTGATGGATT
TTGGCTGCTGCCAGGTCTCCATCTTCACGCTCCTCCTCATAGCAGGGGAT
AGATACTGCAGCATCCGGTGGCCCACAACGTATGTAGCCCGACGGACTGC
TCAACGTACTATCCCGGTCGTCTTCCTCACTTGGGTGGTGGCTGCTACAA
TCTGGGCGCCAGGCGTGGCGACCTCCTTGGCCAGTGATGCCAAGCAGTGC
ATGCTGAAACCTTCTGCCAACATTGCCTTCACCGTGACTTCAGCAATGCT
ATCGTATCACCTACCTGTAGTGTCTATCGTTGCCCTTTACAGTCGTATGA
CAGTCTTGCTGATCCGGAAGATGAAAAGTAAGCATGCAAAACGTAAGATA
GTGCCGATGGATATGCCAAACAGCATAAGCAAGGTAAGTGGACACGCCGA
GGCCCTGCCGGGAACTTCAAACCCCAGTCGTTCTCAATCCCATCGGATAA
ACCCTCAAGGTGTCCTTAGGAAAACGGTGTCATTTTCCTTGGAACAGAAG
TGTACGAATGCTCATGTCGTGGACGATTCTTCTTTGGGGGATCCTGACAT
CGATATGGACACTTCTTCCGTGTTGGACTCGTATTTAAAAGACCTAAAGC
TGCCCGGCCAGGTATCACCAAAGTTACAACAAGGCAAACAACCTCTAACT
GTAAACGAGAACGGATGGTGCTGTTTGTGGCAACCATTTTGCAATGGAAT
AGTGCCGTTGGATGTTGAGTGGGAAAATGCAGGATCACGGCGTAGCAGCA
CTGTAAGCACGCAAAGCTTTCGTCGAAACGTCCGACAAAGTAGCCACTTG
GGGGAGAGAAGAGAGATGCGTGCCGTGAGGACCCTTGCCGTAGTATCGGT
AGTCTTTTTGATCTGTTGGACCCCATTTATCACCATGTACCTTGTTATTG
CCGCGTGTCCAGCATGCATCAGTAGCACGGCTTTTAACGTGTCCTATTGG
ATGGCCTACATAAACTCTGGTCTGAACCCCATCGTCTACAGCCTCCTCAG
CCCGGAGTTTAGGAAGGCCTTCAAGAAGGTCCTACGAATCGGCTCCAGGG
CTCCTAGTCAAGCTGGACGCCAGTCAACCCTTCAAGCTGGATAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113520-exon-Sc0000229-1564993656:72511..72536 | BlTCONS00113520-exon-Sc0000229-1564993656:72511..72536 | Branchiostoma lanceolatum | exon |
| BlTCONS00113520-exon-Sc0000229-1564993656:63816..65396 | BlTCONS00113520-exon-Sc0000229-1564993656:63816..65396 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000229 | genome | Sc0000229:63816..72536 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055699 |
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