BlTCONS00113517 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00113517
Unique NameBlTCONS00113517
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Full-screen view
Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000229:44917..60378-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00113517 ID=BlTCONS00113517|Name=BlTCONS00113517|organism=Branchiostoma lanceolatum|type=mRNA|length=15462bp|location=Sequence derived from alignment at Sc0000229:44917..60378- (Branchiostoma lanceolatum)
GTAGGTTCTAAGCAGGTCGAAGGTCATGAATCAGCAGGAGCAAGAGCTTG
GAGTATGCGGGAGGTATGTTGTTGTCCTTTATCGAAAATCCTTTATATAT
TAATAAAGCAAGGAGGTTTAAGTTCTTCTTGATATGAGGACCCAGTTTAT
TACCCAAAGAGCATGTCATTGCAGCGTCAGGGCGTTCGATTTGATATAGC
CAGTCCAGCCTGCAGGCTGCGAAGCTGGTGTGTTGCGCACTGTTGAAGCT
ACTAGCCTAGGGTGGTTTTTCCGGTTGAACACTTGCAGCTAAAAGATCCT
TGAATATGTGTATGGTGATTGCTGAAGAAGACTATTATCATACATTATCA
CCATGTGCAGATGCCTGTCGGTGAAGGAGGTGATCTATTTATCTTGGCCC
CATTTTGGTGTAAAATAGTGAAATTTATTATGTTGATCTGAACTGGCTTC
AAAGGGATATCCGTAAGGGACTGGTCGATATTTAGCGGGGGGGGGAGGGG
TGGTGCACCGGAGGGGAGGGCCATCGAGAAATTTTTTGGCCTGGGGGGAG
GGCCATCGAAAAAAAATTTGAGCCGGGGGGAGGGCCATCGAAAAAAAACT
GCATCAGGGGGGAGGGCCATCGAAAAAGTTTTTTTTTAATTCATTATAAC
GTTACATGTAACGTTACCTTCCAAAGTTCTGGTAATTTTGTATACGTAGC
AATCTGCTATTGAGAACGCGCACGCATCCCTAAAAAACTCCCCATATTCT
ACGGCCTGCGTGCGGCCTGTCGGGATTTACGTTGAAACCGTCAGAGGGGC
GTCCGGGCGTCAAATGACGACGAAATCTCACTTTGGACCTTTTTAAGCTA
TGCCCGGCTTGTCCGGAGTCGAAGCGCCACAATCGTCGCTGTCAGAGTCC
CTTCGGTGCGCAATAGGAAGCCATATTCCTGGTAACGTTACTTACAAGTT
ACAGAAAACGTGGAACGCTACAATCGTCGCTGTCAGAAGTTCTCGGCGGT
GCGAAATAGGAAGCGATATTCCTGGAATTCCCAAGCTTGTTTGCAGACAT
GTTTGCAGAAAAATCGCCGCCGAAACCGCTGTGCTGCGTCAGATTGTACT
TACAGAAAACGTGGAACTACAGTCTAATATTAAAAAACTTTGTAGCACAA
GGAGATCCAACGCACGCGTTTTCCCACAAAGTTGCCGCTGATTGACAGTC
GGCATCCTTTGATGCCGTCGGTGAGACGCCAGCAAGTCTACCAAAGTAAC
CAAAGGAAAGTCGGCGGTTTGTGGGCGGGGCCGCAAATATTCTGGGTGGG
AAAATGACATAACCTCGATCTAGAAATTTGTCAGAAATACAGTTAAGAAT
CAATTCTATTCCCGCGCTGACAAAGAAAGGAATCTTTTACGTTAATAACT
GCCTCTGTTTGGGTCAACTGCGGACTGTCGGCTTTCAAATAAGGAGATTT
CCCCGGGAATCTGATACATTTACGGCTGTTCTAATAGTCCGGGACCCGCC
CCGCAGATATATACTCCGCTATTGTTTACGTTTTCGCGCGATNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
ATGTGGACTCTTGTGATGGTAACTTACCAGCCCTGCTTCTTTGACCCACG
AATGGATCTATTCTATCGTCACTTGATTAACTAAAGTTTCATATTTGGTA
CTACGATGATTGTAGCGTTTATAATGTCTGTAACGGAATAAACTACAGTC
TATTCGTGATTATTACTTATAAGTTCATCACGGTNTAAAGTTTCATATTT
GGTACTACGATGATTGTAGCGTTTATAATGTCTGTAACGGAATAAACTAC
AGTCTATTCGTGATTATTACTTATAAGTTCATGTTTGGTTAGCTTACCAT
GTTAGCAATTTTCATGGGTAAATCCTGGTATTAGTGGCATAAAAATAAAC
TCTTTGGTCGAGAACATACGAATGAATATGAAACGAAAGTTAAGGGACAA
ACATGATATGGTAGCCGGTTTCATCAAAGGTTTTATTTTCTGTGTCCATT
CCGAAACTTGGTCGGTACTCACGTACCTGAAAACACAAATAAATATAAAA
GTAAAACAGCGTATGAGAAGTAAATAGCAACAAGTGACAACTTGATAGCT
ACCGATTTCCTTCGTTTTGAAAGGCAAATCATCGGGTCGTGTTAGCACAA
CCGCCGATGATAGTACATCAAAGGCGCAAAACCACTGACAACCGCTCTCA
ACTGGATGATTTGCCTCTCAAATTGCGAGAAATTGCGTTTTTGAAGGCTT
GAAAATCCAAAAATTCCCGGGAAATAATGCCCTCCGGAGCCGCCCTAGAT
TGCCTTCGGGTTGGCGGGAACGCTGAGGCAAGGTAAGTCTTATTATGCAC
TTGCCAAAATGAAAAGTCGACTCTATGTATTTTGGGAGAGACGCGAATGA
TGTTGCGTGTGCGTCAGGACAACCCCGAATACGTCCGCTGTCCCAGTCAA
ACATCACTACCGCTAACTTTTATTCAGTAACATGTTCATGTGAAAAGTCA
TGAAAAATGGGGGGGAGGGCCATCGAAAAATTTTTAGAGCCGGGGGGAGG
GCCATTGAAAAAAAAAATGGGCGGGGGGGAGGGCCATTGAAAAAAAATTT
GAGCCGGGGGGAGGGCCATCAAAAAATTTTTTTACCGGACCCACTTTGCA
CCACCCCTCCCCCCCCGCTAAATATCGACCAGTCCCTTAAACTCCAGGAA
ATAATTAATATGAAATACAGTATGGACACATGGGGGTCAGGGAAAGATGA
TATTGTCTCTTCCGTTATTTTGGAATAGGCATTTGGGGTAGTTTAGGAAT
AAACAATTGTTGCATGTGGGTAATTTTGGAATAGTCCATTTTTTGCAATG
GGTGATAGTGGAATGGTCCATTTTTGCTTTTTGGTAACATTGGAATATTC
TTATTTTGCACAGGTATGATTCGCTTAAGTCAACTTTTCAATGGGTGTGA
AACATGTTTGCTCACAAAAAGTATTTTCTTTTGTTATCGTATGTATCGTA
AATTTGTAGCTATGAATTCTTTGTTCCCAGATGTACCATCTTCTAGCAGG
TCCTGATGCCAGCTGTTGAACTGAACATGGAACCATGTCGGCTGGGGAAG
GAGGATGTACTGGTGCCAAGAGACCTCATTGAAAAAGTGAGACTGTGCTT
AATTTTCAATCCTGTCAATAGTGCCAAAAAAAGCCTAATTGACAGGAACC
ACAGGAATAAGTTTAAAACTGGAGAAAATCTCTTACCTAACCAAAGACTC
TACTGTACTCTACAGTACTCGACTGAAACAGTAAACAGCCAATCAGAGAA
ATTGTGCACTGGCTCGGGGTAGAGTTATTACATGGTAAGAGAAAGGTTGA
GAGTTCAACCCCCGACAAGGGCATTTTGTTTTTCTTCCTTAAAATTTAGT
TAATTACTCTTGCCCAGGGATGTAATTAAACCTTCTTTTCAGGATTATCG
TTAGGTTTAGGGTTAACAGGATCATGAGATTTTAATCTTAACATTATCAA
ATGAACACCCTGTCGATATTGACAAAAATTCTTAACCTGTCAGTAGTGCA
AAAAATTCTTATTGACAGAAACAACCTGTCAATAGTGAAAATAATCTTTT
TGACAGGAATATCCAATTGATAGTGCCAATAAAGCTGTATATTACACTTT
GTCAATAGCCTCAACCTAATAACTGTTATATATATGCTCTTTGAGTCTTA
ACAAAACTCATGCAAGCATGCCATCTGTAAGATTCTATTGCTTAAGTCTC
CCTTTTTTTCAGCCTGAGGTTTTCCAGGATGTCCTAAGTCTGGAGACCTG
GAACAGTGTGCTGTCAGCAGAGCAGAGGCAGCATCTCAGCAAATTCCTAC
CCACATTTCCTGACAACAGTACTCACAACAATGAAGAGACACTCAGGTAC
AAGCTACTGTTGATTATATGATATAAGCATTGAATTTCACTTTTGTAATA
CTAATAGAATGGTATTTATTTATTAGATTCTATTAATTGAATGCTATTGT
AAATTCACTCACACACTCACACCAGTTTATTGTCTGTTGTTCCCCGGGGT
GTGGGGGTTAGACTTGCTTGCTCGAGTATGCTTGGGTTGATTCAATTTGA
TAAAACATGCTATTTTGATGTAGAATAGAATAAGATATGATATACACCAT
AATGTTAGAAGACATAATGACATTTTCAAAGCTGTATGTGTAATTGATAT
GTCAATTGTGATGCAACAATTTCAGAATCCACATTCAATTTTGCATCAGG
AATTTGTTTCTTTCTCTTTTGTAGATCTCTGTTTTCAGGAGAAAATTTCA
AGTTTGGAAATCCCTTGCAGTCATTTCAAAAACAGCTGAAAGGTAACATC
ACATGTTCTCAACTGTATGTATATGTCTTTACTTCTCGGGAGCAAAGCTC
ATCATGCAGGAGCATTGATTTAAGCTACTACTGGGCAAAGCAGACACAAC
GGGCTATCGCATATTTTCAAATTGTCCACCTGGTATAATTTTATGAATGT
TTAGCTGTGACAGTCGTACCTGCGCAGTATAGATAAGCAAGTAACACAAA
AGCTTTCAAGTTGTAATGGCTTATATATCAGGTAGAAAAGGATGGATGTG
TCTCCTGCCCTTTTGCTTGTATCCCCCCCTCCTGTTAAACAAGCTTCAGT
TGGTAGTTGTAAGTTTATTACTAGTAAACATTGTTGTATCATGCTGTGAC
ATGGCTGCAAGTTTTATAAACAAGAACAATTCAATATTAACATTACCAAA
CTACACCCTCTCATAGGTGGCTACCTGTTTCCAGCCAATGCCCGACTGAA
AGCCAAGTGTCAGAAGGCCAAGTTCAGAGACTACAAGTTCCGCCAGCAGA
GATACTACCAAAAACTACTGAAGGATGTCATCATTTCCAGAGAGGTGACA
TATGCTTGTATCCTTTATTTCAGAATAGTGCTTAATAATGGACAACAACA
AAAATGTCATTTTACTGTAATTGTAAAATTTGTGTACCCTTCGGATGCAA
TTCAGTATGTGAATATTTCTGTCCTCATTCTGCCCTCCATGTTACTCTTT
ACAGCATTGATAGTGTGCTTTTCATGCCCATGTACTTACTTATAGTGTAA
AGGTATTTTATCAATTAAACTTCTCCATTGACAAAATGGAGGGGAGACAA
TACAGGTGATTAGTCACCTCTGCTAGTTGTCTGTATGAATCTACAATGTC
TTAAACAATATCTTTTTAAAAATTTACTTGTCACAGTTATAGACTGGTTG
CCATAATAAATCACATGTCCGCCATGTACATGTCTGCAGAGAGTCCTGCA
GTCAGCACTACAGAATGGTCCTGATTACCGGGTGCCTCCCCCTCCCCATC
CTGATCAACAGAGTAGGCCACGCATAGATCCTGTACAACAGAGAGCCTCC
AGAATGTACCACAAGATACTGCTGGAAGTAAAGGATGAATGTGGGGTAAG
GCAGAGTTCTCAAGAAAAACGTACATAACATAAATGTATATCCATAGATA
GAAGTGCACTCTACATTTGATCATTTCACTAGACTAGAACTATCATTCTC
TCTCACTGTCTTACTAGATTGTTTGGATATTGTTTCCCCCATCTGATTTT
CATAACTGTGTGCATGTCATTACAAAATTTGCTATAGTTCCCTCAGTTAT
ATTATGTGGACATACAAACATGTAGCTTCTGTTCTTGAATTTTGTTAACT
TCTTTGGCTTGTTTATTTATAGGTGGATGATGAGACGTCTTCTGATGAGG
AAGGTGAGTCTCCCCAGGGTAAGTTGTAATTGATATTTATTTAACTCCTT
CTCTGTTTCCTAATAATGGATAAGTAAGTCAGAGATTGGATCTAGTCAGA
TCTTGTCAAATTTGAAAATTCCCTGACATATTCTGACTCATCAAATGCCA
GCTATGTGGACCGTTTTGTTTTGTTGTCAATGTACACAAAAACACTTGTA
AAAGATTGCCATCGAGTCCTTTTACATTTTAAAACAGGTGGTGTCAAAGT
TACATGTCAATGAAATGCATTTATCCTCCACACTTCCCACAGAAGCGAGC
TCTCTGCTGAGTCAGCAGGTGTCCATGTTGTTTGGAGACTCCCCTCCTAC
CACTCCCAGGGTGGTGTCTACCATGGCACCCAGGCCTAAAGGGGCAGACC
TCGGAGCTTCAGGTTAGAAATACATTGCATCACAAATGCCACACAGCCTT
CATGGTATTTCTTCATTGTTGTTTAATTTTCTGCATTTTACAGGCATCCT
AACTGTAGATTTCCAGTATAGAGCTTTGAGTGTAGACACCTCAGTTATCT
CATCTACATGTATACAAGAAGAATGCATTGGATCATATCTTAAATATCAT
ATCCTATACATGCCTTAGTCACCAGTTTTTAATCACAGGTGTCTGTATGT
TGTTGAATTTGATTTTCTCTTAGTAGAGTTACATATAATGATATCCCTGT
GTTTCTACAAATGCAGGAGCCTCCACAGTTCTCCAGCCACCTCCTCCTCC
CCCACCCCCTCCACCCACTCCAACTGACCAGCAAATCACCAGGATGCTAC
TCAGGCACAAGAGAAGACGAACAGAGCAAGAGGTGATTTATAGTACTTGT
TTATTTGTGTGTGTGTTGTCATTTTTCATCATAGATATTGAGTTCTGGTT
TTCAAAATAGTAACTTAGGCCACAGCAAGTAAATTTTATGGATGACATCC
TCCGCATACTCCAAAATTAATGAGATAGGGCGAAAAAAAAACAAGGCGGG
CCAAAAAAAAACAAGATTCCTATATTTTCAAATATTGAGATCATAAGTCT
TGTTAAACAAGAATTGAGGCGACGAAATATGATATCATGACCAACAGGTC
TTTTATTCCTGTATTCAACCAATGAGGTTTCATATATAATATAAAACCTC
CTTGATTTGATGTAAACATGTCCTTGTAGATGTGTATACATCTCAATAGA
CTAACTACAACAAATGCAGAAAAGAGCTCGTTGTACCATCATCTGAAGCA
ACTACACTGGGAATTCATATGCGATGAGACACCTTGTGTATACAGCTCAA
TTAACTAGACCCATTATTTATATAATGTCCTTGCTAGAACAAATACAGAA
AACAGCTTGTTATTATACCATCATGGGCAGGAACTACAATGAAACACCTT
AGACTATCAACGTTTACGACATGTTTGCCAATTTTTGGCATGTTGACCAC
TGTCAGAGGGCAATGAAATTTCTTGTTTTTTATTTCGAAATCAGGCGAAA
ATTAATGAGCGCGCTGATGTCATCCATAAAAATTACTTGCTGTGGCCTTA
GCTGTTTGAGATATGTCTATTTTGTACATATGAAATGGATTATGTATATA
TACACATGTATCATATATGTTGTAACTAGATTCAAGAAACAATTCATTTA
ACATTGTCAACCACACTTTTTTTATATGCAGGATGCACCTGAGCTGGACA
CACAGGGCATGAGCCTTAACGAAGTGATCCTCCGAACCAATCGCAGACCC
ACTCTACCCAGGCAAAGTAAGAAAATTTTAATTGATTTTGTACTTATATT
CCCCAATGAAATGGAAAAGAGGTTGCCATGACTGGTGATTAGATTCCATC
TCCCATGGCTGGATTGTGACTACATCTTCTGCTGTTCTTGTAGTGATGCC
GTCCTTTTCACCACCTGTGGTGAAGAAGAAGGAGAAAAAGGATCGACCCA
GGAAGAAGCCCAAAGCAGAGCCCAAGGTGGAAGAGGACCAGTCTTCTCTC
GGTCCTACCAATGCCGGAGGTGTGACATCCACACAGACAGGGGTGGCAGT
TGGGAAAATGTGAGTCAAAAAGTCTTCAAGTTTCACTGCATGAGTAGGGA
TGATTTTAGAAAGTTTACAGTTTGTCTCACTTTTGTCATTCAGGACCTAC
AATGCAGGTTAACAGGCTGAAGGACAACATGCGGATATAGAAGTACATGT
GAAGGGGTGTCTTTGAACCATCCCATTGATTAAAACAATGTCAGAAACTT
CTGTATTTATGAGATAGATGACCTATCTTATTTTTCTGTGTAAGAATGCC
ATGTTGTAAGCTCTGTTGATCAAAAGTCAAACTAACTTACAGTTTCTGCA
ATCTTCTCCTAACCATGTATGTTGTTTTGCATCTGTGTTAACAGGAAGTC
TGTGGGAGGGATGTATGTCAGTTATTTTGTGCTCCTAAAGTCCATTCTGC
AGCGTACATCGGAACAGTCCCTCAGTATCAGACAGGTGAGCCTTTGGAAT
TACCTCGAGCTCATTCCAAGTAAATTCCACATCACCACTCTAAGTTTCAA
ATTTTTGGACTTGATTCCCCTGTCAGTTGATGATAGTGATCATCATATCT
TTTTAAGTACCAAGTGTTTACATTGTTTGAGAGGGCTTCATGCTTGAAAG
CAAAATGTGCATGACTTGAATGATCTTATGAAGATATCAAGCTGTAATAA
GTTACATGTATGTGGGGAAACTAAAGCATTGTGCATTAGAACTAGCATAG
AATGATACTTGTACTTCAGTGTACAAGAGGTACATAAAAAGTCTCATTCT
CCGTGCCCTTTTCCCCTTCCCAGCTGGAGGAGTTTGTGCGAGACTGGCAG
TCTGCTCCCACCAGCCTGCTGAACGCCTGGTACTCTACCCACAGGGACTG
GTCTCAGCTGGTTCAACCTGCCCTCAGGTTACTGGCCGGCAAATCAAATG
GTCAGTAGCAGAGAGGCATACTGGATTTGTTATTTTACAAAATAATCATG
GACTGGTAACCATACAAAGCAGCATAATGAAATTTAAAGAAATTCTTTGA
ATGGTGAATAGTGTACAATAATTGTTTGTTTAGAATACCTGTTTTACAAA
GAAATAATTGATCAATACAAATGTAGATGTTTCAATGATTGAATTTCTTT
ACACATCCATTGTGGTACATTTGAATGTCATGAAGGCTCGTTTAATATCT
TAGTGTATTGTAATAAATGTTGCATAGCCTAGATTTTTTCTCCACTGAAC
ATTACATTTTTGCAATATCATGCTATTTCTTACTAAGTCGTGGACACCTT
TCCTCCTACCAGCACTGCCACCATCCTTCTGCCCCTGTGTGGAGTACAGG
ACAGGAACACAGGACTGGAAATGGATAGGTCAGCCTGCTTTCAATTTGCT
ACTTACACATACAGTTACAGTACTATAAACATGTTGATTGGCAAGGGTAA
GTTAGAAAATCTTCTTTTAGATACTATAGTACTGGTAGATACATTTATGA
AGGCTAGACATCCAGGTAAACAATATATAAAGTAAATTCAAACTCTACAA
CTGGGTGAAATTCAGAGATTTACTTCCTATTAGATAGATAGGTCTGGATA
CATTGAAAACTGCATATCAGCGTCTGTTTTTCTCCCCCAGGACAAGCCTC
AGATTCAGACTTGACACTGTTGTGTAAACAGTGGCTACAGGGGCTAGGAC
TGAACCAGAAACAGGTCAGGCTAGATCTCATGCAAAGATTATTTTTGAAA
CACATCATCATATAAAGAGAGTACATGTATTAGATGAATAAGATATGACC
TGTGTAAGGCCTCAGAGAAGATGAAGGTAATTCAACTTAAACCTGTCGAT
CAAGATTTCGTTTTATTAAATGTACAAGGCCTTCTCCAAGTTATCGTAAA
GTCTTTTAGTTCTATTCCTATGCTCAGGTTTACCTTTGAAAAATTTACAC
CTACTATGTAAAGAAGATGATTGATAACCGTATGTTATTCCTGTTGCAGG
AGACAGATGGAAAACAGAGCTCACCTGTTCCTCCTCCAAGAATGTGAGAT
AATTCTTTCTTCTGTTATTGAGAAAGTGATCAACATGAAAGATTTTAACG
ACATCTTGGCAGTAACACATAGAAACCCATTGATTGTAGGTTAGGCTATA
TGTATTTTTCCATGATATGAAAATTATCACACATTGTTCCTATGTGAAGA
TTGCACCATGTGAATGAATCCATGTTACTGCAGGAGAACTGACTATGTTG
TGAGGCCAAGCAATGGGCAGGAAAAAGAAGAGTTCAGGAAACAGGTACCA
TCTTTTGTCTAAAATACTGCAAATACAGCAGGCTTCTTTGTTTTCGCCTA
TCAGTCCTAAAAATGTCATTCATTTGAATCAGCACTATTGTTAACTATTC
ATATATTCCCTAATGTTGCTAATGACCATATGTTAAGTTGTATACCACAT
TATGACCACTCATATACTAAATTGGTCAATTTCTTATCCATAGTATTTTT
AGGAGATGTGAAAAATTTATCACACCTTGATTTGTTTCCAGGAGGAAGCC
CGTTACCAGGGACCCCACAAACCCTTCACGTACCGCATGCACGGTTACGA
GGCAGTGGTGGGACCAGTCAAGGGGGTGAAGGGAAAGGAAACCACTTTTA
ACAAGGCCAGGGAACACTCTCTACTTGTGCCTGATCGGCCAGCTTGTGTC
ACCATTCTCTCATTAGGTTAGTCACTAAGGTGCCATGGAAGCACATCACA
TTATTATAGTCTTTTGTTAGAATTCCAATACTAATTTTGATCACTATAGA
TTTGATTGTAAATTACCAGAAAAATGACAGATGAGATTGCCTGAAAAATG
ATGGATTGGATTGGAATTGTTCTGTATGAAGAGTTTTAACAAAGTTACAT
GATTTGTACTGTTATTGTTATGTACACCCTTGCCAATAATCTGATGCCCT
TTTCCAGTTCGAGATGCAGCAGCAAGGCTGCCGAATGGGGAAGGTACCAG
GGCTGAGGTACGTAAATTAATTTCAAACAGTACACAGTATGACATTAATA
CTGTCTGCATTTCTTTTCCAATCTGATTCTAGTAATAGACAGACTGAGTT
GAAACTCTTACTAATCTAGCACATTGCTTGTGTCTTCACTTCAGATTTGT
GAGCTGTTGAAGGACTCTAGCTACCTGGCTAAAGATGCAACCGACTCACA
GGTAACTGTTCTGTCCCTGTTGGGTTAATCAGGGGATGTCACATAGCTTG
GCAATGGGTGATAGTCATACATTACAGTCATTCACAGACCTAATTGTGCA
CGTACATGTAAATTACAGATCAATGCTGTCGTGAGTGGAGCCTTAGATCG
ACTCCATTATGAGAAGGACCCCTGTGTAAAGTACGACCCCATCAGGAAGG
TGTGGATCTACCTGCACAGGAACAGGACAGAGGAGGATTTCAGTAAGTTA
TAAAGAGATTATGCATCATAATGTGCTGGTTGTATCACAGCCCCAGTATG
CATATTTGATGTTAATTCTCTCACTGCAATCCCTTTTGCCAGTTTAACAC
CAGTATCAAACATGTACTATATGTTGCTTCTTTCAGCATTAAAACTATCC
CCTCGTAAATTGTATCTCATAGCAGCAGCTATGTCTTATTATTCACTTCA
ATACATTCTTTAAAAAATGACAAACAATTACAAATTGCTGTGCCCTGATT
TCTGCTCCTTCTACATTATACTTCAGTGCGAATCCATGAGGTGGAAATGG
AGGCAGCCAGACAGAAGAAAGCAGCTCAACAGAAGCAGAAAGCTGCTAAG
GTGTTAATTGTTGTCTTTTCTAGTACAAGAAGTGTTTGTATTGCCTTCCT
ACATTTTACAGTAATTGACATGCCATATTTTATGTTTACTCTGCCTTTAA
ATGAGATAGTTTTCACAGTAATTGCTTAGTACTGCGTATTATAAAATGTA
TTTCATAATGATACCAGAAGGAAATTGTTCTTGAAAATATTCTAGATGTA
ATGTTTTAATTTGGGTATCGGTGACAAAGACATAAAGAAACTTTCCTGTG
ATTTGAATGTCAAATCTTGTCTAAGCTGTGCATGTGTATACACAAGATTA
TCACCCCAGTGTTTTATCCTTCGCAAATGTAAGTAATGCTATTCTGAATG
TCACACTTTTCTAGAAATCCAAGCAGCCTGCCATTGTGAGCTCCACAGCC
ATGACTACATCTGCAACTGCTACTTCTACAACTGTGACAACACCTGCCAA
GACAGCTGTCAGCTCAGAGGTGACCAGGTGCAAGTCTGCACCATCCACAC
CTTCACCCAAGCCTCCAGTCCTCCCACCAGGTGAGAAGAAGTAGAAAGAG
CTAATACTAGTACATGTACTATGTTTATGGTATGTGTAGGTACATTTATA
CTGTGCAAAGAGCACATCATCCTGTTGCCTTTCCCATGCATATGAAACTT
GCATAAGGTTTAAGTGCAAGAGATATGCATGTTGTAAGGTAGCAAAAGCT
ACAGCCATGTCAAAGTAGTTCTCAGTTTTTATGAGTCTTTTCGTGTCTTT
CAGGCTTCCAGAGTATCTCTCCTATACCAACATCCCTGTCCTCAAGTCAG
CCAAGTTCTCAAACAAGTTCAAGTCCAACATCAACCCTGCCAGCACCAGC
TGTCCTGAAACCTGCACTGCCGCCATCACCACTGGCTCAGGAGCCAGCCA
AGAAGCCTACCCCTCAACCCAAACCTCGAGGGTCCCTCGACCTCCAAGTC
CCACGGCTGAAGGTGGCCCAGCCTGTGCAACTGAAGGTAGCAGAGCCGCC
TAGGGCACCCTTGACACACAGGCCCTCCACAAAGCCTGGACTGAGACTAG
TAATGCCTCCACAAGGCCTGCAGGCTGCAGAGAGTGTGCTGTCCCCTCCT
GTGACAGGAACAGGTGCCGTCATCACAAAACCACCTCGCAGCATGCTGAA
GACCCCTCCTTCATCCATGATTGGCTGCACAGGAACATCTCCACCCGTGG
TGACCTCCGTTATTGTGACTTCAGGCAAACAACAGATCCAGATCCCTGTA
GTCCAGCATGTGCAGCAGCCCCAGGTCATATCACCTCCACCCATGCAGTC
GCCCATCAGGGCCTCCCCAACCACCCCTGTGTCCTCTGCAGGGCCCTCCC
CCACAGCCCCCATGGTTCAGAGCCCCTCAGCACAGGGCCTTAAGATAGGT
GCCACTGGGGCTGGGCTCACCTTCAGCCCAGAGGGGATTGGAATGATTCC
GTCCACTAGTGGGGCAGCTAACATCGATGTGAAGAAAGCTGGTGTGACAA
GCCCTTCTACCCAGATCCTGACCATCCCTCTTACTCAGCCAATCCAGCTC
AGCCAGCTCAGCCCAGGCCTCCTTAAGGGTGCAGCTATCACCACTCCTAC
TATCCTTCGTGGCACTCTTCCTACAGCCAGTCTAGCTGGGTTAGGTAAAA
GTATTGTTCTAACTAAGATGCCAGTTGGCACTAAGATTGGGCCCATTGTC
ACAGGGAAGCCCCTGAGCTTCATAACACAGCCTTTCCAGATCCAAGGACA
GAGCCAGCTGCCAGGGTTTGCCACTGTGATTGGCCAGGTGCCTGGGCTGA
GTGTTCAGGGGGCAGGACAGGGTCCTGGAACTGCTGCATCTGGTCAGGCG
TCTGCAGCAAGTGCAGCAGGACAGCCTCAGCCAGCGACACCAACCACAGC
ACCTGCAGCTGTGCTGCAACAAGCACAACATATGGCTGCAGCAGGGCAGC
TCCAGGCACAGTCTCCTTCAGCATCAGGGCAGCCTTCTGCCCTCCCTACA
CCCACCCTCCAGGCACAGACCCTGGCATCACTGGGACAGCCCAGAAGTGG
TGCCCAGCATCCAGCAGTTTCAATAACTGGACATCCCTTTTCCCGCGCCA
CTCCAACTTTTCTACCCTCGGCAGTGGCACAGTCTCTCGGAATTATAACA
ACGCTCCCTCCAAACTTAGTCATGACCAAGTCTGTCACAACCACACATCT
CACACCAGCCAAGAGCGTAGTGACAGGTGTGGCTATGTCAGCTGTACCAG
GAGCAACAAGACCAGCTGTATCAGGTGCCACCATGACATCTGTGTCAGGT
GTAGCACCGACATCAGCTGCCTTGAAGAGTCCTGTGGCCACTACTGTACT
TAGGGCTCAGCCTGCAACAGTGGCAACAGCCAGAAGTCAGGCTCAGCAGA
AATTACAGGAAAAGATTTTGAGCCAACTTAAAGCTTCTCAGTCACATGAC
CAGTTAGAGAAGAAATAAATCCCTGGAACTGGGGTTCCAATTAGCTTACT
TTATTTCTTGAGGAATTCAATATCATGCAAGCAAAGTGTACTAGTATTTT
AATAGATTCAGATCAAACTTTTGATTTTCTTTCCTTGAAAGACACTGTCT
GTTAAAGTGCCAAAGTGATATGAACACATTTACAAGATTTGTGTTAGATT
TCATTTTAGTCAGACTTGCTTTTTTGTTATGAAAATGTATGCAGCTGTAC
TATATCCTATGAAACACAGTTGTGCTTAATGTTGACACGTGCATGACTTG
GATGGTAGGAGAACATTGGAATTATTTCTCATCAGGAGGAAGAAAATTGT
TGTACAATTTCAACTCGGCACTATTCACTGATGCTTTACATGCAATGCCA
ATTTCCACTTCTCCTCGCTACCTGTATAGAAATTGTAGTCAATGCTACTG
ATATAGATGTCCATGTGAGGCAAAATGTACAAGTTGATACTGGCATATTT
ACCCCATAAGCATCAATTGGATCAAGGAAAATTTTGTGGAATGAAGACTA
GTACAAGGTATAATCTACATGCACATATGGAGGCTACCTTGATATTTGGG
GTAATTCCAATATTCATTAGAAGAGCAAACGACTATGACATTTGCAAGTA
TTACTTTATATGTATATGTGGACAACATATACATTACTTAATTGCTTGTC
CCAAATTACCAAAAAGGTATCTATCCATTGCAAACATGTAAGGATTGTAA
TGGATTTGAGCTTACAGCTACTTATTTTTTGGAAATAGATGTAACAAAAA
GAGAACTTTAAAGAATCATTCATCACGCACTCAATGTTAGCTTGTTGTCA
AATTACTCTACTATAGGCTTTGATAGCTGTATGTTAGCATTACAGACTAT
TGTGTTAATGATGATGAATAAAAGTAAAAGAAATGTATCATGATAGATAC
AAAAGTAAATGA

Coding sequence (CDS) from alignment at Sc0000229:44917..60378-

>BlTCONS00113517 ID=BlTCONS00113517|Name=BlTCONS00113517|organism=Branchiostoma lanceolatum|type=CDS|length=3909bp|location=Sequence derived from alignment at Sc0000229:44917..60378- (Branchiostoma lanceolatum)
ATGCCAGCTGTTGAACTGAACATGGAACCATGTCGGCTGGGGAAGGAGGA
TGTACTGGTGCCAAGAGACCTCATTGAAAAACCTGAGGTTTTCCAGGATG
TCCTAAGTCTGGAGACCTGGAACAGTGTGCTGTCAGCAGAGCAGAGGCAG
CATCTCAGCAAATTCCTACCCACATTTCCTGACAACAGTACTCACAACAA
TGAAGAGACACTCAGATCTCTGTTTTCAGGAGAAAATTTCAAGTTTGGAA
ATCCCTTGCAGTCATTTCAAAAACAGCTGAAAGGTGGCTACCTGTTTCCA
GCCAATGCCCGACTGAAAGCCAAGTGTCAGAAGGCCAAGTTCAGAGACTA
CAAGTTCCGCCAGCAGAGATACTACCAAAAACTACTGAAGGATGTCATCA
TTTCCAGAGAGAGAGTCCTGCAGTCAGCACTACAGAATGGTCCTGATTAC
CGGGTGCCTCCCCCTCCCCATCCTGATCAACAGAGTAGGCCACGCATAGA
TCCTGTACAACAGAGAGCCTCCAGAATGTACCACAAGATACTGCTGGAAG
TAAAGGATGAATGTGGGGTGGATGATGAGACGTCTTCTGATGAGGAAGAA
GCGAGCTCTCTGCTGAGTCAGCAGGTGTCCATGTTGTTTGGAGACTCCCC
TCCTACCACTCCCAGGGTGGTGTCTACCATGGCACCCAGGCCTAAAGGGG
CAGACCTCGGAGCTTCAGGAGCCTCCACAGTTCTCCAGCCACCTCCTCCT
CCCCCACCCCCTCCACCCACTCCAACTGACCAGCAAATCACCAGGATGCT
ACTCAGGCACAAGAGAAGACGAACAGAGCAAGAGGATGCACCTGAGCTGG
ACACACAGGGCATGAGCCTTAACGAAGTGATCCTCCGAACCAATCGCAGA
CCCACTCTACCCAGGCAAATGATGCCGTCCTTTTCACCACCTGTGGTGAA
GAAGAAGGAGAAAAAGGATCGACCCAGGAAGAAGCCCAAAGCAGAGCCCA
AGGTGGAAGAGGACCAGTCTTCTCTCGGTCCTACCAATGCCGGAGGTGTG
ACATCCACACAGACAGGGGTGGCAGTTGGGAAAATGAAGTCTGTGGGAGG
GATGTATGTCAGTTATTTTGTGCTCCTAAAGTCCATTCTGCAGCGTACAT
CGGAACAGTCCCTCAGTATCAGACAGCTGGAGGAGTTTGTGCGAGACTGG
CAGTCTGCTCCCACCAGCCTGCTGAACGCCTGGTACTCTACCCACAGGGA
CTGGTCTCAGCTGGTTCAACCTGCCCTCAGGTTACTGGCCGGCAAATCAA
ATGCACTGCCACCATCCTTCTGCCCCTGTGTGGAGTACAGGACAGGAACA
CAGGACTGGAAATGGATAGGACAAGCCTCAGATTCAGACTTGACACTGTT
GTGTAAACAGTGGCTACAGGGGCTAGGACTGAACCAGAAACAGGAGACAG
ATGGAAAACAGAGCTCACCTGTTCCTCCTCCAAGAATGAGAACTGACTAT
GTTGTGAGGCCAAGCAATGGGCAGGAAAAAGAAGAGTTCAGGAAACAGGA
GGAAGCCCGTTACCAGGGACCCCACAAACCCTTCACGTACCGCATGCACG
GTTACGAGGCAGTGGTGGGACCAGTCAAGGGGGTGAAGGGAAAGGAAACC
ACTTTTAACAAGGCCAGGGAACACTCTCTACTTGTGCCTGATCGGCCAGC
TTGTGTCACCATTCTCTCATTAGTTCGAGATGCAGCAGCAAGGCTGCCGA
ATGGGGAAGGTACCAGGGCTGAGATTTGTGAGCTGTTGAAGGACTCTAGC
TACCTGGCTAAAGATGCAACCGACTCACAGATCAATGCTGTCGTGAGTGG
AGCCTTAGATCGACTCCATTATGAGAAGGACCCCTGTGTAAAGTACGACC
CCATCAGGAAGGTGTGGATCTACCTGCACAGGAACAGGACAGAGGAGGAT
TTCATGCGAATCCATGAGGTGGAAATGGAGGCAGCCAGACAGAAGAAAGC
AGCTCAACAGAAGCAGAAAGCTGCTAAGAAATCCAAGCAGCCTGCCATTG
TGAGCTCCACAGCCATGACTACATCTGCAACTGCTACTTCTACAACTGTG
ACAACACCTGCCAAGACAGCTGTCAGCTCAGAGGTGACCAGGTGCAAGTC
TGCACCATCCACACCTTCACCCAAGCCTCCAGTCCTCCCACCAGGCTTCC
AGAGTATCTCTCCTATACCAACATCCCTGTCCTCAAGTCAGCCAAGTTCT
CAAACAAGTTCAAGTCCAACATCAACCCTGCCAGCACCAGCTGTCCTGAA
ACCTGCACTGCCGCCATCACCACTGGCTCAGGAGCCAGCCAAGAAGCCTA
CCCCTCAACCCAAACCTCGAGGGTCCCTCGACCTCCAAGTCCCACGGCTG
AAGGTGGCCCAGCCTGTGCAACTGAAGGTAGCAGAGCCGCCTAGGGCACC
CTTGACACACAGGCCCTCCACAAAGCCTGGACTGAGACTAGTAATGCCTC
CACAAGGCCTGCAGGCTGCAGAGAGTGTGCTGTCCCCTCCTGTGACAGGA
ACAGGTGCCGTCATCACAAAACCACCTCGCAGCATGCTGAAGACCCCTCC
TTCATCCATGATTGGCTGCACAGGAACATCTCCACCCGTGGTGACCTCCG
TTATTGTGACTTCAGGCAAACAACAGATCCAGATCCCTGTAGTCCAGCAT
GTGCAGCAGCCCCAGGTCATATCACCTCCACCCATGCAGTCGCCCATCAG
GGCCTCCCCAACCACCCCTGTGTCCTCTGCAGGGCCCTCCCCCACAGCCC
CCATGGTTCAGAGCCCCTCAGCACAGGGCCTTAAGATAGGTGCCACTGGG
GCTGGGCTCACCTTCAGCCCAGAGGGGATTGGAATGATTCCGTCCACTAG
TGGGGCAGCTAACATCGATGTGAAGAAAGCTGGTGTGACAAGCCCTTCTA
CCCAGATCCTGACCATCCCTCTTACTCAGCCAATCCAGCTCAGCCAGCTC
AGCCCAGGCCTCCTTAAGGGTGCAGCTATCACCACTCCTACTATCCTTCG
TGGCACTCTTCCTACAGCCAGTCTAGCTGGGTTAGGTAAAAGTATTGTTC
TAACTAAGATGCCAGTTGGCACTAAGATTGGGCCCATTGTCACAGGGAAG
CCCCTGAGCTTCATAACACAGCCTTTCCAGATCCAAGGACAGAGCCAGCT
GCCAGGGTTTGCCACTGTGATTGGCCAGGTGCCTGGGCTGAGTGTTCAGG
GGGCAGGACAGGGTCCTGGAACTGCTGCATCTGGTCAGGCGTCTGCAGCA
AGTGCAGCAGGACAGCCTCAGCCAGCGACACCAACCACAGCACCTGCAGC
TGTGCTGCAACAAGCACAACATATGGCTGCAGCAGGGCAGCTCCAGGCAC
AGTCTCCTTCAGCATCAGGGCAGCCTTCTGCCCTCCCTACACCCACCCTC
CAGGCACAGACCCTGGCATCACTGGGACAGCCCAGAAGTGGTGCCCAGCA
TCCAGCAGTTTCAATAACTGGACATCCCTTTTCCCGCGCCACTCCAACTT
TTCTACCCTCGGCAGTGGCACAGTCTCTCGGAATTATAACAACGCTCCCT
CCAAACTTAGTCATGACCAAGTCTGTCACAACCACACATCTCACACCAGC
CAAGAGCGTAGTGACAGGTGTGGCTATGTCAGCTGTACCAGGAGCAACAA
GACCAGCTGTATCAGGTGCCACCATGACATCTGTGTCAGGTGTAGCACCG
ACATCAGCTGCCTTGAAGAGTCCTGTGGCCACTACTGTACTTAGGGCTCA
GCCTGCAACAGTGGCAACAGCCAGAAGTCAGGCTCAGCAGAAATTACAGG
AAAAGATTTTGAGCCAACTTAAAGCTTCTCAGTCACATGACCAGTTAGAG
AAGAAATAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113517-exon-Sc0000229-1564993656:60316..60378BlTCONS00113517-exon-Sc0000229-1564993656:60316..60378Branchiostoma lanceolatumexon
BlTCONS00113517-exon-Sc0000229-1564993656:56743..56848BlTCONS00113517-exon-Sc0000229-1564993656:56743..56848Branchiostoma lanceolatumexon
BlTCONS00113517-exon-Sc0000229-1564993656:55983..56116BlTCONS00113517-exon-Sc0000229-1564993656:55983..56116Branchiostoma lanceolatumexon
BlTCONS00113517-exon-Sc0000229-1564993656:55537..55604BlTCONS00113517-exon-Sc0000229-1564993656:55537..55604Branchiostoma lanceolatumexon
BlTCONS00113517-exon-Sc0000229-1564993656:54985..55112BlTCONS00113517-exon-Sc0000229-1564993656:54985..55112Branchiostoma lanceolatumexon
BlTCONS00113517-exon-Sc0000229-1564993656:54434..54589BlTCONS00113517-exon-Sc0000229-1564993656:54434..54589Branchiostoma lanceolatumexon
BlTCONS00113517-exon-Sc0000229-1564993656:54126..54156BlTCONS00113517-exon-Sc0000229-1564993656:54126..54156Branchiostoma lanceolatumexon
BlTCONS00113517-exon-Sc0000229-1564993656:53717..53836BlTCONS00113517-exon-Sc0000229-1564993656:53717..53836Branchiostoma lanceolatumexon
BlTCONS00113517-exon-Sc0000229-1564993656:53297..53412BlTCONS00113517-exon-Sc0000229-1564993656:53297..53412Branchiostoma lanceolatumexon
BlTCONS00113517-exon-Sc0000229-1564993656:52363..52447BlTCONS00113517-exon-Sc0000229-1564993656:52363..52447Branchiostoma lanceolatumexon
BlTCONS00113517-exon-Sc0000229-1564993656:52070..52235BlTCONS00113517-exon-Sc0000229-1564993656:52070..52235Branchiostoma lanceolatumexon
BlTCONS00113517-exon-Sc0000229-1564993656:51644..51734BlTCONS00113517-exon-Sc0000229-1564993656:51644..51734Branchiostoma lanceolatumexon
BlTCONS00113517-exon-Sc0000229-1564993656:51179..51305BlTCONS00113517-exon-Sc0000229-1564993656:51179..51305Branchiostoma lanceolatumexon
BlTCONS00113517-exon-Sc0000229-1564993656:50751..50816BlTCONS00113517-exon-Sc0000229-1564993656:50751..50816Branchiostoma lanceolatumexon
BlTCONS00113517-exon-Sc0000229-1564993656:50415..50488BlTCONS00113517-exon-Sc0000229-1564993656:50415..50488Branchiostoma lanceolatumexon
BlTCONS00113517-exon-Sc0000229-1564993656:50086..50129BlTCONS00113517-exon-Sc0000229-1564993656:50086..50129Branchiostoma lanceolatumexon
BlTCONS00113517-exon-Sc0000229-1564993656:49835..49895BlTCONS00113517-exon-Sc0000229-1564993656:49835..49895Branchiostoma lanceolatumexon
BlTCONS00113517-exon-Sc0000229-1564993656:49413..49587BlTCONS00113517-exon-Sc0000229-1564993656:49413..49587Branchiostoma lanceolatumexon
BlTCONS00113517-exon-Sc0000229-1564993656:49122..49171BlTCONS00113517-exon-Sc0000229-1564993656:49122..49171Branchiostoma lanceolatumexon
BlTCONS00113517-exon-Sc0000229-1564993656:48928..48984BlTCONS00113517-exon-Sc0000229-1564993656:48928..48984Branchiostoma lanceolatumexon
BlTCONS00113517-exon-Sc0000229-1564993656:48687..48810BlTCONS00113517-exon-Sc0000229-1564993656:48687..48810Branchiostoma lanceolatumexon
BlTCONS00113517-exon-Sc0000229-1564993656:48329..48402BlTCONS00113517-exon-Sc0000229-1564993656:48329..48402Branchiostoma lanceolatumexon
BlTCONS00113517-exon-Sc0000229-1564993656:47799..47964BlTCONS00113517-exon-Sc0000229-1564993656:47799..47964Branchiostoma lanceolatumexon
BlTCONS00113517-exon-Sc0000229-1564993656:44917..47575BlTCONS00113517-exon-Sc0000229-1564993656:44917..47575Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113517BlTCONS00113517-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000229genomeSc0000229:44917..60378 -
Properties
Property NameValue
GeneIDBlCUFF055697