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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000229:23266..27956- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113510 ID=BlTCONS00113510|Name=BlTCONS00113510|organism=Branchiostoma lanceolatum|type=mRNA|length=4691bp|location=Sequence derived from alignment at Sc0000229:23266..27956- (Branchiostoma lanceolatum)
GTATCCGCCCCGCACTGGTCCGGTTCGTCATTTCCGGTTTTGAAAAGATG
CGAGCCCAGCAGAGCACACATGCGCACACAAACACCAAGGCCTCTGTTCG
GGGCCGCGAAATAATTTCCCCGGCTGCTGTGATAACGTCACGGCGCTCCC
ATTCCTAGAAAGGCTTCACACACACGCTCTCTGAGCCATTGCAATCACGC
GTTGTGCTGTCCACACACCGCTAGTAACGTTACACCGTACGCGTACTTTG
ACCGGCAGTGGCTCGTCGACAGTTCATCGCGTGGAAAGGTTACCTACTGA
ATCAGGTAAGAGCAAGTAAGCTTAATCCCCAGTTCTTTAAGGTGAGGGTT
GCACGGGGCAGAGTGGGTGAGATTTTGTATCATATTACTGCTTGTGTAAG
GTTTCCCTGATTTGGCTTTCTTTGCTTCGCTTCACAAATCGGCCATGTAA
TTAAGAGGTTTCTACTGCACTTTATTAGTATCTTAGTATAGGTATAACCT
GTTGATATCGCAGTACTTAGTATCCTTATCCATTATAGAATTTACGATTA
ACCTTCGACATATAGTTGCAAATAAATCATTTTTACTTTTAATTGTTATT
TTGAATTCAGAAAAATAGTATTTGATTAAATGTAGAACCTGTGTCTTGAG
TAGTTGACCCCTTTAAAATTCGATAATTTTGTGGTCCCGTAAAACTCGAT
CCTGTTTGTCCCTCCCTAGCCATGGGTTCTAAGAGAGTGGCCATTATAGG
AGCCGGAGTGAGCGGACTCACGTCAATCAAGGCTTGTCTGGAGGAGGGGC
TGCAGCCTGTCTGTTTCGAGCAACATGAGGATCTCGGTAAGAACAAGACA
TTACACGTCCTAAAGTTCATTTCAATAGCGTTGAAGAATAAAATAGCGAA
TTCCGTTCTGACTGATATAGCTTGACAATACAAAAAGGCTTCGTGGACTA
AATTTGAATACAGTAGTATAGACTATCTTTGAGACCCCCGATAGAAGAGC
TGAAAATAGAAGGGAAGGATGTGTACATATGCGTGTGCATACGACTTTTG
AGGTACGGTAAATCATGCTCGCCTGTTATAAAATCCCTATCATTTGTATA
GTCAATAGGCCACCTGCTGCCATGCTGCTATCTTACTTTTGAAAATATGA
CTATACGTAGTCCCTGACACTGGAGGTGAATTATATTTGTTCCCTTGACT
TCTACCTGCTGTGTGCTACTGCAAATAATCTCGATGCAAACCGCTATTCC
AGGCGGCGTGTGGTACTACTCTGACGATGTCAGGCCCAACCAGGGGGCCG
CCATGTACCGCTCTCTCATCACAAACTCCAGTAAAGAAATGATGTCATTC
AGCGACTTCCCCTTCCCCAAGGACACGCCCCCCTACCTGCCGTACCACCG
TGTGCACACATATCTACAGGACTACGCTCAGCACTTCGACCTGAAGAAAC
ACATCCGATTCGGCACACAGGTAGGGATATCCTTGTTGAACCATGGCCAT
TGATTCTATAACATCTGTACTAAGATCTTTGTTTTGATGTCCTTCTTTCT
TACGTTCAACGCTGTCTATCACTCCAGGTCAGTCGCATAGAGAAGACAGA
AGACTTTGATGAGACTGGCCGGTGGGAGGTCCGTACTGTACAGACGGGTT
ATAGCGATGGGGAACAGAAAGAGATCTTTGACGCCATCATGGTACGTACT
AACGGGGCTATAGAAACAGAAATGTTTAACACAGCAATGACTGATGATCT
CCGATAAGAGTGAAGCGTAATAAACCCAGCCGTCCACTTACGCCATCTTT
TACATGAGGCTGACGATGTGATGGTTCACCGTTCTTTGGCCCTTCGATAT
TGTTGAACTTAAAGTCCCTATGTAAGCAAACTTCTCTCAACTTTATCTCA
CGACGCTCTGTTTCCTCCCCAGGTGTGTAACGGCGTGTTCGCCCGGCCGT
ACGTTCCAGCCGTGCCTGGTCTGTCGGACTTCGCAGGTGTCACCATGCAC
AGTCAGGAGTACCGGACGGCCCAACAGTTCACGGGGAAGAAGGTGGTTGT
TGTAGGTCAGTTATCACCTTCCACTTACGTACCTAGAGTAAGTCATTCTC
TTCCTACGTTTAACTCTTAAGTCATTCTCCTCTTAAGTATATGTTTAACT
CTTCCGAAATGACTTCCGATAACCTCCTTCATCCGCGATTCTGTTCCAGG
GGCGGGAAACTCTGCAGGCGACGTGGCGGCGGAGATCGCTCAGGTGGCGT
CACAGGTGAGATTTTATGACAACTGTTGTCCTGTCGTCTGGCCTTTGATT
CCTATGTTTTCTCTTCTTTGCCAAAACGACCAAAATACATCATCCTAAAT
GGACATATATCTTTTCATTGTAAACTGTTTATATCAGTACTGAGACCACA
CAAAAGCTCCTTTAGATCATTTTACCCTTCTCTAAAGACGTAACGTTACA
CTGCTGACTGTTGACCACACTGACAACCCCACCCCGTTCCCAGGTGTACC
TGAGTCTGAGGGACGGTGCCTGGGTGCTTCCCCGGCTGGCTCAGGCCGGG
GTGCCGCGGGACATGATGCTGCGCCGGGTACTTATGGGCATGCCCGAGGT
CATCGTCAACAAAATCATCAAGGGCGAGGCGAACGCCAGAGTGTGTCATG
ACAACTACGGGCTGACGTGTCCGGCGGACCCGCTCAAACACTCCGTCATG
GCGAATGACGAGATAGGTTTCAGACTGACCACCGGGCAGGTACGGTTGTA
CAATAGTGTATATTAATCTGATATATAACTGTTAATTGTGTTTGTTTGAT
AATAGACATGCAATATGTTTGGTGTCGATGCTTCTGAATTTTTGATGAAG
TGATTTATGTATCTATGATGTGTATCTCGTCGTTTGTCTTGGCATCAAAA
GTCATTCCTAAATTGTGCTTCATGTCTAAGTTGATGATACGTAACCGTGA
CTGTCATCCCTTTGATAATCCTACACCTGTTCTTAACAGGTCCTCACGAA
GCCCCAGCTGTCCCGGTTCACCCAGCACGCTGCTCGGTTCGCGGACGGCA
GTACAGTGGACGGGCTGGACGCTGTGGTGTTCGCCACTGGCTTCAACCTG
GCCTTTAACTTCAGTGACAAGTCCATCCTTCCTAGTAAGTTCCATGCATA
GTTTCCCGACTGTTCACGTGAATCTTATTAGACAACAATGAAGTGTAAAC
AGGCTTGTACATGAATTTGACTTAGCAGCGATCGCCAACTTTTCTGCACT
GTACCTTTCGTCTGTTTTTCTTGAAGTTTTATAATTATTTATGTGCATAC
CTGCAACGTCTCAAAGCGGTCAGTCTGCCAAAGAGACCGAAGAACAATAT
CAGTCTTGTATCATTGATAATCTTGTCCTTCCTCAGATAACGCGGAGGAC
CTGAACTTGTACAAGTTGGTGTTCCCTGCGGAGCTTACAAAACCCACCCT
GTCTGTGATCGGCTGCCTGTCTACCATAGGGGCACATCCGCCTATCTACG
AACTACAGGCTCGCTGGGCCGTCAGGGTGTTCTTGGTAAGTAGAACGTTC
CAGTCATTCCGCCCTACGGGCATTCTTGTCAAGTTGTTTGGATATTCTAA
GTATATGAACTTGACCGTCCAAGTTGTTTGGATATTCTAAGTATATGAAC
TTGACCGACCGGCATGCTGTGTTACTTGGCAAACAGATGAAAAAATTATA
ATCAAGTCAAGCAAACAAGTCTTACGTTTTCACTTTTAACAAAAGCGTAA
AAAGAACGACATTTATCAATCAAAGACAAGAGTTTTAGTTTTCTGAACAN
AAAAGCGTATAAAGAACGACATTTATCAATCAAAGACAAGAGTTTTAGTT
TTCTGAACACAAGAGACCGTGTTTTCACACAGGCGACTTATTTTGTTCCA
GGGTCTGAATAAGCTTCCCGATAAGGAGACCATGCTGAAGCGGATCCGCT
CCGACAAACAGGAGCTGAAGCAGCGGTTCGGCTACGTCAAGCTTCAGGTA
ACATGTTTTTGTCAGACTAAAGGCTTTGCTACAGGGGCGGAATTGCTTTG
CTTCATAGGGAAGTAAGGAGATGCATGTCTGGTGCATAGTCTTATAAACA
CGACATCGAAGCACATGGAGGGGAAAGAATCGTGGACCTTCACGTCACAT
CCACCTTCAACTTGAACTTTTTGTGGAGATGAAGAGTAAGTTTCCAATAA
CACAATGATATCGTATGATTTATTACCTGTTAACATGATACATACATAAT
TGGTTCCCTGTAGGCTTGCCATAATTATTTCTAACACGTCTCGCTCATAT
TACAGATGATGAACGTGCCGTACCGGGATGACATTGCCGAAGAGATCGGA
GTCAAACCATCATTTTGGAGGCTCCTTCCTCGGGACCCAAAATTAGCTTT
CCTCTGCTACTTCGGCCCCGCCTTCTCTGTCCAGTACCGCCTGCTGGGGC
CGCACCCCTGGTCAGGTGCAGCCGGCCACGCCAAGTCAGCCCTGGCCAAC
ACCCTGTACCCCTTCAGGTCACCTGCTCTGGACAAGGAACAGTCGGGCCT
TTCACTGGCCAAAGTTGTCAAGTTTCTCTTGTTGCTTGCCGTGCTGATGG
TTGTGTTTAATCATTTTATGTAATAGAATTGTGTCAAATCCCTTCGTGAT
GGTAATGAATTATGGGATTGTTTTTCATACATTACTTCCTT Coding sequence (CDS) from alignment at Sc0000229:23266..27956- >BlTCONS00113510 ID=BlTCONS00113510|Name=BlTCONS00113510|organism=Branchiostoma lanceolatum|type=CDS|length=1590bp|location=Sequence derived from alignment at Sc0000229:23266..27956- (Branchiostoma lanceolatum)
ATGGGTTCTAAGAGAGTGGCCATTATAGGAGCCGGAGTGAGCGGACTCAC
GTCAATCAAGGCTTGTCTGGAGGAGGGGCTGCAGCCTGTCTGTTTCGAGC
AACATGAGGATCTCGGCGGCGTGTGGTACTACTCTGACGATGTCAGGCCC
AACCAGGGGGCCGCCATGTACCGCTCTCTCATCACAAACTCCAGTAAAGA
AATGATGTCATTCAGCGACTTCCCCTTCCCCAAGGACACGCCCCCCTACC
TGCCGTACCACCGTGTGCACACATATCTACAGGACTACGCTCAGCACTTC
GACCTGAAGAAACACATCCGATTCGGCACACAGGTCAGTCGCATAGAGAA
GACAGAAGACTTTGATGAGACTGGCCGGTGGGAGGTCCGTACTGTACAGA
CGGGTTATAGCGATGGGGAACAGAAAGAGATCTTTGACGCCATCATGGTG
TGTAACGGCGTGTTCGCCCGGCCGTACGTTCCAGCCGTGCCTGGTCTGTC
GGACTTCGCAGGTGTCACCATGCACAGTCAGGAGTACCGGACGGCCCAAC
AGTTCACGGGGAAGAAGGTGGTTGTTGTAGGGGCGGGAAACTCTGCAGGC
GACGTGGCGGCGGAGATCGCTCAGGTGGCGTCACAGGTGTACCTGAGTCT
GAGGGACGGTGCCTGGGTGCTTCCCCGGCTGGCTCAGGCCGGGGTGCCGC
GGGACATGATGCTGCGCCGGGTACTTATGGGCATGCCCGAGGTCATCGTC
AACAAAATCATCAAGGGCGAGGCGAACGCCAGAGTGTGTCATGACAACTA
CGGGCTGACGTGTCCGGCGGACCCGCTCAAACACTCCGTCATGGCGAATG
ACGAGATAGGTTTCAGACTGACCACCGGGCAGGTCCTCACGAAGCCCCAG
CTGTCCCGGTTCACCCAGCACGCTGCTCGGTTCGCGGACGGCAGTACAGT
GGACGGGCTGGACGCTGTGGTGTTCGCCACTGGCTTCAACCTGGCCTTTA
ACTTCAGTGACAAGTCCATCCTTCCTAATAACGCGGAGGACCTGAACTTG
TACAAGTTGGTGTTCCCTGCGGAGCTTACAAAACCCACCCTGTCTGTGAT
CGGCTGCCTGTCTACCATAGGGGCACATCCGCCTATCTACGAACTACAGG
CTCGCTGGGCCGTCAGGGTGTTCTTGGGTCTGAATAAGCTTCCCGATAAG
GAGACCATGCTGAAGCGGATCCGCTCCGACAAACAGGAGCTGAAGCAGCG
GTTCGGCTACGTCAAGCTTCAGATGATGAACGTGCCGTACCGGGATGACA
TTGCCGAAGAGATCGGAGTCAAACCATCATTTTGGAGGCTCCTTCCTCGG
GACCCAAAATTAGCTTTCCTCTGCTACTTCGGCCCCGCCTTCTCTGTCCA
GTACCGCCTGCTGGGGCCGCACCCCTGGTCAGGTGCAGCCGGCCACGCCA
AGTCAGCCCTGGCCAACACCCTGTACCCCTTCAGGTCACCTGCTCTGGAC
AAGGAACAGTCGGGCCTTTCACTGGCCAAAGTTGTCAAGTTTCTCTTGTT
GCTTGCCGTGCTGATGGTTGTGTTTAATCATTTTATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113510-exon-Sc0000229-1564993656:27652..27956 | BlTCONS00113510-exon-Sc0000229-1564993656:27652..27956 | Branchiostoma lanceolatum | exon |
| BlTCONS00113510-exon-Sc0000229-1564993656:27121..27237 | BlTCONS00113510-exon-Sc0000229-1564993656:27121..27237 | Branchiostoma lanceolatum | exon |
| BlTCONS00113510-exon-Sc0000229-1564993656:26487..26704 | BlTCONS00113510-exon-Sc0000229-1564993656:26487..26704 | Branchiostoma lanceolatum | exon |
| BlTCONS00113510-exon-Sc0000229-1564993656:26266..26379 | BlTCONS00113510-exon-Sc0000229-1564993656:26266..26379 | Branchiostoma lanceolatum | exon |
| BlTCONS00113510-exon-Sc0000229-1564993656:25902..26034 | BlTCONS00113510-exon-Sc0000229-1564993656:25902..26034 | Branchiostoma lanceolatum | exon |
| BlTCONS00113510-exon-Sc0000229-1564993656:25702..25757 | BlTCONS00113510-exon-Sc0000229-1564993656:25702..25757 | Branchiostoma lanceolatum | exon |
| BlTCONS00113510-exon-Sc0000229-1564993656:25218..25463 | BlTCONS00113510-exon-Sc0000229-1564993656:25218..25463 | Branchiostoma lanceolatum | exon |
| BlTCONS00113510-exon-Sc0000229-1564993656:24823..24967 | BlTCONS00113510-exon-Sc0000229-1564993656:24823..24967 | Branchiostoma lanceolatum | exon |
| BlTCONS00113510-exon-Sc0000229-1564993656:24422..24570 | BlTCONS00113510-exon-Sc0000229-1564993656:24422..24570 | Branchiostoma lanceolatum | exon |
| BlTCONS00113510-exon-Sc0000229-1564993656:23960..24055 | BlTCONS00113510-exon-Sc0000229-1564993656:23960..24055 | Branchiostoma lanceolatum | exon |
| BlTCONS00113510-exon-Sc0000229-1564993656:23266..23651 | BlTCONS00113510-exon-Sc0000229-1564993656:23266..23651 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000229 | genome | Sc0000229:23266..27956 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055694 |
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