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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000229:374122..380969+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113507 ID=BlTCONS00113507|Name=BlTCONS00113507|organism=Branchiostoma lanceolatum|type=mRNA|length=6848bp|location=Sequence derived from alignment at Sc0000229:374122..380969+ (Branchiostoma lanceolatum)
GGTCCTCTTTCGGATAGATGTTCGTGCTTCTGGGTACCGATCGTCCCTGA
GACGAACAAAACAAGAAAAGACGTGTGACGGTGTCTGACACGTCATTCAG
CCGGCAGGGTCCAGTCGTAAGAACGTGCTCACGTCCTGTCCGTGACATTA
TTGACTGCCTGTGCTACAGAGACGTCGTCTGCTTATCAGAGCGCAGATAG
TTGTTAAGTATCGCCCGTACATCTCCGCCGTCCTGTCACCGCCACACCAT
GTCCTTCCTAGCGGCAGCGCTCCCGGCGGACATCCAGCGCCACTGTACGT
CCTACTTTTCCTCTGGGCGGAAACTAACTTCTTAAGATTCTATTAGTCTT
CAGACGACTTGAATGTATGGGCTGATATCTCATCATCAAGTGTCTTAGAA
TTGTATAAACACTTTCAATGTTATAGATGTGCACATAAAGTGTTAAATTT
TGTTTTTGTTTTTCCACAGATCCATCGTACGAGTGTCTGATGCGGGAGAG
ACAGGCGGGAGTGACCAGCTGGAGCGCACTGCCGTCCGCTTCCTCAGACA
AAGGTAGGCGTGCTCCGCTTGCATTCATTGTCATGTGGAGGATACCGGTA
GATGTAGACTTGACTTTTCACTAAATTGTAACACAGATTTCTATTCATTT
ATTTATATCTTCACATTAAGTAAGGGATCGCAGTAACCACGAGTCAATGC
CTTTTTTTATACTTTTAAGATACCAAATCGCGGTTTCATACCATTAATTA
CTAATGATGCTAATGAGACCGTGGCTTTCCCTGTTGACTCTATATCGTTC
CTGTGATCGCAGTGGGGCGTGTTTGTATCAGAGTTGAGGGAAGTGTGTTC
TGTGTGCGTAGATGCGGGTTATCGTGTATAATTATCCGTCTCAGCCCGGT
GTCGGTGCCAGTATTACACGTTAGAAGACGCGGTGTGTACGGTAGGAGTC
CCCAAGGTCCGCTAGTTACCGGGCTGCCCAGCGGGACACGTGCCGGTCAT
CAGGCGGTCGGCAGGTGCACGGAAATACCCGACCAAGGCGTTGATATCAT
GTTGGTCCTGTATGGGAAATGTTAGGCAAGCAAATCAAATTTTAGGCAAA
ACAAATCAAAGTGCTCTCTCTATCCTGCTCCGTCGTCAGCTAGCTTACCC
CGTCTACAGTATCTGCCCTACCGACAAGAGGCACATGATACACACGGGAT
GCAAACCACTAATCTACAAAAACCACAAGTGGCGTCACAGCCAGTTACTT
ATAACGATCCTAGATCTACATTAGTTTGTGTGTCAGCCCACGATACACCT
TTTCATCAGCTCAGCAAATAAAGTGACATACGGAGCCATGTCCGTATGTG
TGCAGTAATTATCAAAGCCTGGAAATCCCCCCATTAGGAAAGTACAAACT
TAACCCTCAGAGATCACCATTTGTCAGATTATCACAGCTGAAATCTTTTT
GTTTTTGTTTCTGTCCTTTAAATTGTATAGAACAAAAGACCTCTCTGAAT
TTAGGTGCATAGATTGTACTTGTACATGAAGTCTGCTTTAGGTATCGTAC
GTACATGTACATAACATACAGCCAAAACACGGGTACCGTGCTAGCCCTGG
TAAAATATTGACAAAACAACTTCATCAGATTACATAAACGGGACGTTTTA
TCTATAATATCCACCATTTCATCCCTTCCTTTAGAGGAAAGAAACTTGTC
TTTGATACCTTCCTTTCATAGATTGTAGGCTTAACCCTTAAAACGCAGGC
CGGAAAAGTTCTTAAAAACGTTACACGCACGCTCTGGGTTGTAGAAAGTG
TTGTGTCGGCACTCAACGGACGTCTTGGAGTGGCAGGAAACACTTGAGAA
CACGACGGAGTACATCCTGGTTCTTTTCATTTGTAACCTTTTCCACATCA
ACTCTAGTAGATGAGACTACAGAGTGCACATCCTGAGTTGTCTCGCCCAG
ACTATCCTGAACAGTTTCACCCGTAAGCGTTCCTTGTCTCACACAACAAA
CCGTTTCCTTCGCCCGACTCTCCCTACCAACTCCAGCTCAAAAACGTTTG
TCTTTCCTTAATTGGATTAGTCACTGAATATTCACCACCGATTTCAGTCC
GATGGCGTCCTTCCTTATCTCGTTTTACCACGAACATTTTCTTTGGATCG
GCACCGCACAACTCAATGTGCTTCTTATCACCCGAACTCAAGGGAACAAT
GGTGGAGAATAGCGCAATCCCTAATAACGACTTATGGGACCCTCAAAGTA
ACGGTCTTTGTCCGTCAGCATATGCCTTTGACGCCGTAAGATACGTTGTT
TGTCTTGTAGACTGAGAAAAAGGAGAAGGCCTCTGGTGCTGAGGACCGTC
CGACCCTAAGCCTTAGTAGTGGTTCTTATAAAGGAGTTAGAGCCATAAAA
GTATGGTTTAAGGCTAAAGAACATAACTAACATTCGTATATCACCGCAGC
TCTTGTAGCGTTTCAAGCTTGAAATATTACTGGGTTCCATATTTCACGGG
GTACTTGCAGTCAGTACGGGAAAGTATAGTGCGTGTTTAAGCGTACGGAA
GAAAGCCTGGTTTGTCCAAATTTCAAACCCTACCTCTTGTAGATCTTACT
GAGACCCATCATTTGAAATATGTCATTGTCCATTGCTTTTTTTATTGGGC
GGATAGTCCGACCTGTACCGTTTTCGTAGTTGTAAATGGAAAATAGAAGA
TCAAGCTCGTGAAGTTCACTCTGTAACGTTACATCTTTGGAAGTTGATTC
TGGTTGAGATTTCACCACGGCTGTCTCCCACCCTTCGTCCTTGGTCATTC
ATTCAGGTCCGGGATTAAATACATGTATCAAACGGCCTTCGTGTAACGCT
CGCCTACGCGCTGTGTAGAGATGCCTGCTTTGTGCACTTCCATCTTTTGA
CATTTACAAAATGTCTGACGATGTTAAGTTACGAGTCGTGTTTATGTTTC
TGACCTTTGATGAACTTCTCATATCATGTCAGACCTGCACATCATGACGC
CACGTCACGACCCAATGTGTACTCTAGACTTCTAGTGACAAGCACTGTTC
TTGTTGTTCTTCCGATAACAAGCCTTTAATTCGTCCTGTTCTTGACATTT
CCAGGATACAACAGTTCGTCACTTCACTCCATGAACAAGCCTGCCGTGGA
CACCAACGCGCATGCCCAGATCAGAAACATGCAAGGTAAATCAACTCTAT
CTTCTCTCGCACCTCCCAACTTTGTCATTTCGATTTCCGCATACCGTGAT
GTATGCCAAAATGTATGAGCTCAAAAATAATGTCGGAAGGTGAGTCCGAA
AGTATATATGAAGCTGTATCAATAATGTTAATTTCATGTTCTGTTCCTTT
ATTTTACAGACCCATACCAGTTGTTCGGACCAATCAGCAGTCGTCTCTGT
CAGTCAGGTGAGGATTTCATCAGTTGTTTATGTTTGGTACGGATNAGGTG
AGGATTTCATCAGTTGTTTATGCTTGGGACGGATCAACAAATGTTGACTG
TACTTAGATTTGTGCATGCATGACGCTAGATTCTGCCACATATCAAAAGG
TTCTTCAGGCCGTAAGCATTATTGTGTGTTATTGTGTTGTCAGAAAGCTA
CCCTTTGAGGTCTTGAGAATTTGATTAATTTTTCTTCATTTTGGTCATAT
TTTCCCGCTTATTGATGATGTATGAGTAGCAGTACCCTAAATAACAGTAT
GCGTTTAAGAAGGTTTAACTAAATCTGAATAAACAAGTTGAAACGCATTT
CTATCGCGAAAGAAAAATTTAGCGTAATTAGAATTATCATGAACAAAATT
AAACGCCACAACCTCGACCATCTCTGGCTGTAATGACGTCACGAGGCCTG
TCCCAGCGCCATACCAGGTTGTCAAGGCGACGGGAACAAATGACGGTTCT
TGTGAGAGGAAATTCGCGCCATCTCCCGCCTCCCGCTGCCAGGGACCGCG
CAACCGCGGGCGGCAGAGGCTATGTTCGGGGCGCTTGTTTAACATTCTAA
TGATAGTACAGACAAACTACGGGCCGAAAAGAAATTAAATCATGTATTCT
GTTGTAGTGTTAGCAATGTTGATTTTACCAGTCACGGATACATATGTGAA
AAAAATCTATGCTCATAACTGTTGTACTGTAGCCGACAGTCAGCCTTATT
AAACCAAGGACATTATATGCTTAAACTATACACCAATGGTACGAAAATGC
TGGGAAAGGGTGTCTGGAAACCCTCCAAACCAGCCGCTAGCTGTCGACTC
GATCACCTGCAGACTGCTACACTGCAGCGCGCTAACTCGTCTCCAGGAAA
CAATCACCGCCCTGTAATTACCCAAACTGCGCCTGATTGTTCCGGGTAGG
ACATTTTATTAAATAATTCATCCTGTGGCCGTGCAGCAGCCAGGGGAGGC
TATCATCGCAGCTTGAAGTCGGGAAAGGCGCCGGGACATTCTATCCACGT
GCAGACGTTTCTTTTTTGTTTGTCCGCAGAAAGTCCTACCCGTGTCCCTA
TACTGCGCCAAGCTGAAACATTGTCGACTTAACTGCCAGAAATGTCGATA
CATATATTACCTTGATGAGGAATGTTTTCCTCTAAAAATAAAGACTGTTT
ACGTACGTCCATACCCCTTAAGATATCTCTAAAATTCAGGATATCAATCC
TTCAATAACACGTAAACAGCCAGAAGAGACGTCGACAAGTTAACAAAGTC
CAGCGCTTAAAAACAAGTTGACATCACGGGCTCCTACACTCAGGGTTTCC
TTTTATCTTCTTTTTCTCAAGCTTTCTCTTTGAAAGTTTTTGAAAATGTT
GTTTTGTGTGACATTGTTCGGACTAAAATGTCAGCTAGCTTTAATCAGAT
GATTTATCGCGTTGCTGGGTAACGGGTGAGTGTTGTCGTGCGAGAGAAAT
TTACTCGTGTTCGCAGTTCGCTTTGACGGGTTCAACAACAACTATTCGGT
CATATAATCACTGCCGAGATCCGAGTTGTTACCGGTCGTTTATGTACCGG
ATAATCCAATGGAAGGAAATAAAACGTCTAGAATAAAAGATAATAAACTA
AATAAAGGAAGCCTTTCCTTAGTGAAAGTTTGTGTGTATCTTTATGATGA
CAGACCTCCGTTATAAATTGCAATCCCTCTGATGACTTGAAGATAGGTTT
TTGTAGTCAATTTGTTATTCAAGTCGACGACATGCTAATAAAAAGCCACA
ATGCCAGTTTCTGCACCCCGGAACAAGGAAGCATCTGACAAACCATAACT
ATCTAGATACAAAACGTTGAGGGTGAAAATGTTAACTTATTGCAACAAAA
TGCACTATGCAAGATAGCAAAATTATTCGTGAATCTTATCTACTGAAACT
AACACAACGAATGTTGTTTTCTATTGCTGTAGGTTCAGGCCAGATCCAGC
TGTGGCAGTTCCTCCTGGAGCTCTTGTCTGACGCCGCCAACGCCAACTGC
ATCACCTGGGAGGGAACCAACGGCGAGTTCAAGATGACGGACCCTGACGA
GGTGGCTCGGCGCTGGGGGGAGCGCAAGAGCAAACCCAACATGAACTACG
ACAAGCTCAGCCGCGCACTGCGCTACTACTACGACAAGAACATCATGACC
AAAGTGCACGGCAAGAGGTACGCCTACAAGTTTGACTTCCACGGACTGGC
CCAGGCCGTGCAGGCGGCTAACGGTGCCGCGCCGTCCCCCTACAAGTTCC
AGTCGGACCTGGCCTACCTGTCCGGGTACGCGCATGCGCCCAAGCTCAAC
TTCGTGGGAGGGCCCATCCCGTCATCCTCTGCGAACCTGTTCGCGTCGCC
ATCTTCCTACTGGTCCTCCACAGCAGCGGCCAACATCTACCAGAACTACG
GGAATGGCATGGCTTCACACCCCGGCCACACGCTGACGTCATACTACTCG
TAGTAATACTGTAATATAAACTACAATACTAAGTACACACAGGACTCAAA
ATACATGCCACAACTACCCAATCTTATTGGATTAAGATTAATATTAAGAT
TACTTATGGGGAAATGTGAGTGAGTCAGCCGATGGGCTATGTAATGTGGC
TTCATATTTCATACTTCTCCGAAACCACAGTGTTAAATATTATCATGCAG
GGACATGAAACATTTATCTCTTTTCTCCTTTTGTCCAGTACCTCTTTAAG
ATTTGCGTGAAATGACATTGTAAGACATGGATCATTCATAACGGCTTCGG
TCAGTGATTTCTTCTTTCAACAGAAGATTTTTCTGTCTAAGGAGCCATAA
CAGATATATTGAAGAGCATACTTCCAAAGCTAGATTGCTGGGAAGGCTAA
CATAAAGAAAAGTACATTCCATGCAGTTGTTACGTTTGTACAGTCATTGC
AGCATTGATGGTGAAATTGTTGTTGTTGTTGTTGTGACTCGAGGCAGATT
GAAGTGTTTTGCCTGTTTGTTTCAGGGAGCCGGAGCTCTCGGTGTGCTCC
ATGTATTTTATATTGTTGACGTTCTATTTGTCTTTTTTATCTTTTCCTTA
AATTTAGTGCGTTTTCCTTCCATTTCTTGCCAGGACCGGGAGATGCTGTG
CATTATGTGATCCGGTCGTTTTATTATAAATTCCACGTGCTTCAATCCTT
GTAGCGTATTATATATATAGGCTTGTAAGATTTTTTTTCAATTTACCATC
TTTTTAAGATCAGTTTTTATGTATAGTGTAGTAGCTACTTTAATCTTAAC
GTATCTATTCTATCAAGAGAAATCGATATTTATGCATGTTTATGACGAAC
AAGACGACATGTATTTTTGTACAGATATGAAGGCGAAAGGTGTTTGTATC
ACATGTCGACAAAACGAATAAAACGTGTACATAACGTAAGAATGCAAA Coding sequence (CDS) from alignment at Sc0000229:374122..380969+ >BlTCONS00113507 ID=BlTCONS00113507|Name=BlTCONS00113507|organism=Branchiostoma lanceolatum|type=CDS|length=780bp|location=Sequence derived from alignment at Sc0000229:374122..380969+ (Branchiostoma lanceolatum)
ATGTCCTTCCTAGCGGCAGCGCTCCCGGCGGACATCCAGCGCCACTATCC
ATCGTACGAGTGTCTGATGCGGGAGAGACAGGCGGGAGTGACCAGCTGGA
GCGCACTGCCGTCCGCTTCCTCAGACAAAGGATACAACAGTTCGTCACTT
CACTCCATGAACAAGCCTGCCGTGGACACCAACGCGCATGCCCAGATCAG
AAACATGCAAGACCCATACCAGTTGTTCGGACCAATCAGCAGTCGTCTCT
GTCAGTCAGGTTCAGGCCAGATCCAGCTGTGGCAGTTCCTCCTGGAGCTC
TTGTCTGACGCCGCCAACGCCAACTGCATCACCTGGGAGGGAACCAACGG
CGAGTTCAAGATGACGGACCCTGACGAGGTGGCTCGGCGCTGGGGGGAGC
GCAAGAGCAAACCCAACATGAACTACGACAAGCTCAGCCGCGCACTGCGC
TACTACTACGACAAGAACATCATGACCAAAGTGCACGGCAAGAGGTACGC
CTACAAGTTTGACTTCCACGGACTGGCCCAGGCCGTGCAGGCGGCTAACG
GTGCCGCGCCGTCCCCCTACAAGTTCCAGTCGGACCTGGCCTACCTGTCC
GGGTACGCGCATGCGCCCAAGCTCAACTTCGTGGGAGGGCCCATCCCGTC
ATCCTCTGCGAACCTGTTCGCGTCGCCATCTTCCTACTGGTCCTCCACAG
CAGCGGCCAACATCTACCAGAACTACGGGAATGGCATGGCTTCACACCCC
GGCCACACGCTGACGTCATACTACTCGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113507-exon-Sc0000229-1564993656:374122..374415 | BlTCONS00113507-exon-Sc0000229-1564993656:374122..374415 | Branchiostoma lanceolatum | exon |
| BlTCONS00113507-exon-Sc0000229-1564993656:374591..374674 | BlTCONS00113507-exon-Sc0000229-1564993656:374591..374674 | Branchiostoma lanceolatum | exon |
| BlTCONS00113507-exon-Sc0000229-1564993656:377226..377306 | BlTCONS00113507-exon-Sc0000229-1564993656:377226..377306 | Branchiostoma lanceolatum | exon |
| BlTCONS00113507-exon-Sc0000229-1564993656:377481..377528 | BlTCONS00113507-exon-Sc0000229-1564993656:377481..377528 | Branchiostoma lanceolatum | exon |
| BlTCONS00113507-exon-Sc0000229-1564993656:379504..380969 | BlTCONS00113507-exon-Sc0000229-1564993656:379504..380969 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000229 | genome | Sc0000229:374122..380969 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055691 |
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