|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000229:250580..255360+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113484 ID=BlTCONS00113484|Name=BlTCONS00113484|organism=Branchiostoma lanceolatum|type=mRNA|length=4781bp|location=Sequence derived from alignment at Sc0000229:250580..255360+ (Branchiostoma lanceolatum)
GCCATGGAGGAGTGCTTCTTTGCATATGCATGGGCACTCAAGAATGCGCA
GATCCTTGGTTAGTACTCTTGTGTTGGTAGAAAAATAACATGAACATGTA
TGTACCTGTCTGATATCTGTATGTACATACGTATGTATACATAGCAAGTG
GTTGTTACGACAGAACAATATCTGATGTTATTACCTCAATCAAACATGTC
ACTTTCTTAATTGAGAATTGAAGCATCCCTGTGTGAAGTATTTGTGCAAG
ACTGACATGTCTACGTTTGTTCCGCCCCAGGCACCACAGCAGAGAGAGTG
TGCCTGGCCGGGGACAGTGCAGGAGGAAACCTGTGTGTCTCTGTGGCCAT
GAGAGCTGCTAACTATGGCATAAGGGTTGGTACTCTAGTACAGTACAAGT
TCATTGGTATACTGTCTTTACATATCAGTTTTGCTGTTATATACTCTATC
TACTTTTACCACAGGCTTTCTTTTTAATGTCAACAGTGATGTACAAATGC
AGGTTTTGTTGTTGTCCTCCCTTCCTGCAGGTTCCTGATGGAGTCCTTGC
TGCCTACACCCCCTTCCTGGTCCGGTACACCCCCTCCCCCTCCCGTCTGT
TGTGCATGATGGACCCCCTCCTGCCCATGGGGATCCTGTCCCGCTGCATT
GCTGCTTATGCCGGTCTCAAGGAGAAGAAGCCAGGAGAAGACGTTAGTTC
CTCAAGTTCAACCACAAGTTCCACACCACAGCTCAGCACTCCTGAGCACA
ACTTCTCCTCAGCCAGACTGGTGTTCGACCCTTCTCCGACAGAACCCAAG
AGAAGTGGGGAGGGGGCGGCTGCTCCCAAACTGTTATTCACAAACACAAC
GGGAGGTTTGTGTGAAGTACACACCCCATCACCCAGCCCTCCGAGTGGAG
AGGGACCAGACCATACAGACATACCAGTATTAACTGTAGAAACAGAGACT
GCTGTCATACATGGTAAACAGAACACTGAACAAACTGTAGATAATCTAAA
AGAACCACACTTCGAGGACATTGCATTGTCTCCTTACGAAGAGGACAGCG
GTGACTCGGAGTGGTCCCTAACAGACAAACAGACTGAAGTAGATTCACCA
AGTAGAGGTGGCGCGGGTGATGAGAAGAGTCCAGAGGAAGGATCAAAACA
GATGGAGAAGGACAGAGCAGCGGAGGATGACCCCAACAGGCCCTCCTCTC
TGTCCCTGCCATCTCTGCCATCGCTGGATGAGATCTCCATGGCGATATCG
AAGATGACGGAGAGTAAGCCGGAGGAGGTGGTGCTGCCCTCGGAGCCGGT
ACACAGCCCGTCCTCGATAGCCCATGTGACCAGGTACCGCCCCTCCCCCA
TCCTCAACAACCCCTACATGTCCCCACTACTTGCTGATGATGAGCTGCTC
AAGGGCCTCCCACCTGTCTATTTAGTGGTGAGTTACATGTAGCTGCACAA
GTATTCATTGCTCTTTTCACAGGTAGAAAAAGTGACTACTACCAGGACTG
TTGTGTCAAATATAGATTTGAAATCAAGTATTACATGATACCTTTTTATG
TTTTCTGGATCCTACCAGCATTTATGCAGATAGATGTGATATGGTAAATC
CCCATGTAGTAACCTGTGCCCATGTTCCCTCCAGCCGTGTGCCTTGGACC
CTGTACTGGATGACTCCATCATGTTTGCCCAGCGGCTGAAGGCCCTGGGC
GTCCCGTACAAGCTCCAGGTGGTGGAGGAGCTGTCTCACGGCTTTCTCAA
CTTCACCTCCATCTGTAAGGAGGCGCGGCAGGCCAACGACCTCTGCGTCA
ACAACCTGCTGGAGATGCTGGGCCGCAGACCGCGTGGGGGGCGAGTCGGC
ACACCCACCAGAAAAGTATAGCGTATACACGTGTTACAGTATGCTCTTGG
GATTGACAGGCATTGTAGGCTAGAATGTTGATAAATGGTAACTACAACTA
GCAGCATTTTAGCTGTAGACTGTAGATCATCATGAAGTACTCTGAAGTTC
TGGACTAATACAGACTGACTAATGCTAGCTTACTTTGGTTACTAGATTAT
CACATGGAAGCTGAGCAGTTGAACTTTTTCTCTCAACTGTCCATCATGAA
CAGAACTGGCCTAGGTGGTGTGCCATGACATACATGTCAGTACAAGTTAC
ATTCATGCACTGCAATGGAATAGTGGACAAGAATAAGGATTCCTGACATA
GGGCCAGTCTCTATGTTAACCTGTATTGTGACCCAGGCATCCATCAACAG
TGTGCATTACCATCTGTCATTTATGACTGAATATTGATGATATGAAAATA
ACTTTAAAGTGATAGCAAAGAATTGAGCCATTTTAAAGCAATATTGAGGT
CACTATGATCAATTTTATATAGCAAATCTCGTAATGGCCATTCAATTGTG
TTCAGTGTTACAGTAGTTACTTGAAAGATTGCAGTGTAAATTGAATGAAA
TAAGTTTATTGTAAGCAATCAGAAGTATTGATTTGATCAGGTGTAAACAT
GAGACATTTTTGATATATGAAAAATAACTTGAACTGTAACTTCCTTGGCT
GTAAACCAACAGCTGACTTGGCGCTGTATCTTTACTTGTAACTTACAGTG
GTATAGTGGTTTGCAGGACAGATTCTGGATTGCAAGGTTTGTGGTTTGCA
TCTCTTGCTGTCTGTCTTACATATACATACTGCCTGCATGTCGTCTGGAG
GGCATGTTGTTATCAAGTACTGTTGCTGTGTGTTGTTTTTTCCAATTCAA
TTTTAACCTCTAAGGTGTTTCAATTTTTCTGGTGGACCGCTGCTGAACTT
TTAAATGGAGTAGTCATTAGACAAACATACTGTTTAATGTACAAATACTT
ACAACATTGTCAAATATCCTGGCCATATATAGTTATACTGTAATAATGAT
AATGATAATGATAAAAATGGTTATATTCAGTGCTTGGCATTGTACAGATT
ATTGAATCCCTGAAAATTGGATCTGAATTGCTTTGACATTCACACTTTTA
GCTAGAAGTACATGTACATACAAATGTTGTGGTGTTGATGATATGGCAGG
TTTTGACTGTACTACAGACTTCTCCTTGTATGCTTTATGTGTGTGTTGAA
CAGTGGAAAAGACGACAGTGTATTCTGCACTTTAGCCGTACTAATCAAGG
GCTTGATGATTGTATGTGATGCTGTGTGATGTAGAGAAATAGTGAAGAGC
TAGATAAAACAACTTTGCATCACTTCGAACAAAAGTCATACTGGAACTCA
AGTGATCATGAAGACATTTACATAATGTATTGTAGTATTTTCCTTGAAAG
AGTCCAGAAACTACAGCAGTTGTTAAGAATAAACAGTGAAGACTAGTACA
TAAACAGTGCAATATGATAGTTAGGAATTTACAACATTCTAGCAGGGATT
TTAGGATTCTGCTACATATATGTCTGTTGCAGGTCAGATGCTGTTTTTGT
GTGGAAATAAGGCATAGGTTTGAAATGTTACAAACATGATATAAAAGATC
AAATGTATAGACACTTTGGACGATGACGTCATCGCCCTTTCATGTAGGAG
TGTTGTACAAAATGTCTCTTGCAGATCAGCCTTAAATGTCTTTGGGCTGA
TACAGCCATACACAAAGAAACATGCAAATTTTGTGGAATGAAAAAGGGTA
CCTACATGTTGTTCTTGACAGCTACATATACACGTAAATTTTTGAAAGGA
AATGACTTGTTGAATATACGTTTCAGATTGCTAATGATTTTTTTGATAGA
TTTAGGCACCTAAAGGAGGGCCATAGTGGCTATGGATGGCAANGACTGGA
TGGCAAATGGGTGCTGGTTGTGAGGAATTGAAGTATCCCACCAGCCAACA
GAACTGTCCAATGTACTGCTCTATTTCTGTGCTGAATGCCCGTATCTGTA
CAGTGATAATAGATATGGACATATGGATTATAGCTGATTGTTTCACAGTT
CTTACTTATGTCTTTAAATGGTTTTATTTCTATTCCTTGAAAAGGTGGCA
TGATAATCAACATAAACCCATGTTGGGCCTGTTAGCTTATAGCCATTATC
AGGTCCATTTACTCCAATATTGCCCTTTTGTTTCAAAATACATACATGAA
ACTTTATATCTGTATAACTTAGGACATACATAGGTGAATCCATATAACGT
TACCTCCTTACTTAGTATACATGACTATAACGTTTTATGACATATTCTCT
TTTGATATGTTTTATTTTCTTGTGCTAGAATTTCAGACATAAACATTGTT
AAACGTAAAGATACGGGTTGTTAAGCTTACCAGCTTGCTTGCTTTAACTG
TTTGTTGAAAAGCTATCAGCTTTGTGTTTTATATATCACATTATTAAAAG
ATTTACCACAATTATTTATTTTTTGTAGCTTTTAGCTAACCAACGGAACT
GCGTGTTACATAAGCATTACATGTTTTATGTTTGACTTTACATTTATGTT
TTGGGTTTCTTACATGTAGATGCAAATGATTATACAATACAAACAGCATG
CTTGGATTTTGTTGGTTTACATTACCTTCTACATGGTACTTTGGTATCTC
ATTTCAAGCTAGTACATGTATTTACCTGTACATGTAACTCCATGCACAGG
AATAGAATGTTTGGAATAAAGTTACATGTATCTCTTTTACATGCACTTTT
GTTAAGACAATGTGGGCCAATTTAGATTAACTTGAAACTGTTTCAACAAG
TTATTTTAAATGTCAAAATCTAGTGTCGCATATCTAGAAATACACAAAAC
TAGCTCTCAACATTTCTTAGGCTAATAGCCC Coding sequence (CDS) from alignment at Sc0000229:250580..255360+ >BlTCONS00113484 ID=BlTCONS00113484|Name=BlTCONS00113484|organism=Branchiostoma lanceolatum|type=CDS|length=1239bp|location=Sequence derived from alignment at Sc0000229:250580..255360+ (Branchiostoma lanceolatum)
GCCATGGAGGAGTGCTTCTTTGCATATGCATGGGCACTCAAGAATGCGCA
GATCCTTGGCACCACAGCAGAGAGAGTGTGCCTGGCCGGGGACAGTGCAG
GAGGAAACCTGTGTGTCTCTGTGGCCATGAGAGCTGCTAACTATGGCATA
AGGGTTCCTGATGGAGTCCTTGCTGCCTACACCCCCTTCCTGGTCCGGTA
CACCCCCTCCCCCTCCCGTCTGTTGTGCATGATGGACCCCCTCCTGCCCA
TGGGGATCCTGTCCCGCTGCATTGCTGCTTATGCCGGTCTCAAGGAGAAG
AAGCCAGGAGAAGACGTTAGTTCCTCAAGTTCAACCACAAGTTCCACACC
ACAGCTCAGCACTCCTGAGCACAACTTCTCCTCAGCCAGACTGGTGTTCG
ACCCTTCTCCGACAGAACCCAAGAGAAGTGGGGAGGGGGCGGCTGCTCCC
AAACTGTTATTCACAAACACAACGGGAGGTTTGTGTGAAGTACACACCCC
ATCACCCAGCCCTCCGAGTGGAGAGGGACCAGACCATACAGACATACCAG
TATTAACTGTAGAAACAGAGACTGCTGTCATACATGGTAAACAGAACACT
GAACAAACTGTAGATAATCTAAAAGAACCACACTTCGAGGACATTGCATT
GTCTCCTTACGAAGAGGACAGCGGTGACTCGGAGTGGTCCCTAACAGACA
AACAGACTGAAGTAGATTCACCAAGTAGAGGTGGCGCGGGTGATGAGAAG
AGTCCAGAGGAAGGATCAAAACAGATGGAGAAGGACAGAGCAGCGGAGGA
TGACCCCAACAGGCCCTCCTCTCTGTCCCTGCCATCTCTGCCATCGCTGG
ATGAGATCTCCATGGCGATATCGAAGATGACGGAGAGTAAGCCGGAGGAG
GTGGTGCTGCCCTCGGAGCCGGTACACAGCCCGTCCTCGATAGCCCATGT
GACCAGGTACCGCCCCTCCCCCATCCTCAACAACCCCTACATGTCCCCAC
TACTTGCTGATGATGAGCTGCTCAAGGGCCTCCCACCTGTCTATTTAGTG
CGGCTGAAGGCCCTGGGCGTCCCGTACAAGCTCCAGGTGGTGGAGGAGCT
GTCTCACGGCTTTCTCAACTTCACCTCCATCTGTAAGGAGGCGCGGCAGG
CCAACGACCTCTGCGTCAACAACCTGCTGGAGATGCTGGGCCGCAGACCG
CGTGGGGGGCGAGTCGGCACACCCACCAGAAAAGTATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113484-exon-Sc0000229-1564993656:250580..250637 | BlTCONS00113484-exon-Sc0000229-1564993656:250580..250637 | Branchiostoma lanceolatum | exon |
| BlTCONS00113484-exon-Sc0000229-1564993656:250860..250954 | BlTCONS00113484-exon-Sc0000229-1564993656:250860..250954 | Branchiostoma lanceolatum | exon |
| BlTCONS00113484-exon-Sc0000229-1564993656:251110..252006 | BlTCONS00113484-exon-Sc0000229-1564993656:251110..252006 | Branchiostoma lanceolatum | exon |
| BlTCONS00113484-exon-Sc0000229-1564993656:252262..255360 | BlTCONS00113484-exon-Sc0000229-1564993656:252262..255360 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000229 | genome | Sc0000229:250580..255360 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055684 |
|
