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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000229:234208..237008+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113479 ID=BlTCONS00113479|Name=BlTCONS00113479|organism=Branchiostoma lanceolatum|type=mRNA|length=2801bp|location=Sequence derived from alignment at Sc0000229:234208..237008+ (Branchiostoma lanceolatum)
TAGTGGTGACGTCTGAGTTGCGCGTGTGGTCACAAGGTGGGAGTAAACAG
ACCAATGGGCTAAAGTCCACTTCACGACTGGAACACAAAGAAGGGACAGG
AACAAGATTTGTCCTGTGGTTCTACAGGTATATTTCACCTGATATCAATA
GAGCAGCTCAGTAAAGTTTGTGAGTAAACTGATGGTTCATTCAGAAGTAG
AGTAGTGTCGGTGGGCAGAACAATGCCGCCATGTGCATTCCATTGTGATG
AACATGAATTGCAAACTGACTGGTTTATTTTTCCTTCCCTGTCACATGCG
CCATGTTTTGATCACATTGACAATTCTAGCTGCGATAACAGCATGTATGG
CTAGTTTAATGACAGACAGTTTAGCTATTGCACTGCATATGTTTGTGTAT
GATGGTGCACGTTCTTAACAATTGTGTGTGTAGTTGCCTTTTCCCCAGAT
AAACTTGACTCAACATGGCGGCTGTGGCGTTGTTACTTCTCCTTGTCCTC
GTCCTCCCTACCGTCCCAGCGTGTCCGGACGAATGCCGCTGTCTTGCCAA
ACAAACCACCGTGCTCTGCCACAACTCCTCCTTCACAACCGTCCCAAAGG
GCATCCCAGCCAACACCACAATCCTGGAGATACGTCACACCAAACTCAGC
TCTCTGCGGGAGGGAGACTTCGCGAGCTTGCCTAACCTTGTGAACTTGAC
TGCTGACACAAACGTCATCGGTACAATCGAGCCCGGGTCGTTTAGCGGGC
TCCACAACCTCAAGGTGCTCAACATCGCCAACAATAAGGTGTTCAAGCTG
CCACCTGGACTATTTAACGGTACACACAACTTGACTTCATTCGATGCTGC
AAACAATGAGATCAGAGCCGTCCCAGTCGGCCTGTTCACTCGCCACCCCT
CACTCACCACCGTCCAGCTGAGTAACAACAACATCTCAGTCATGGAGGAA
GAGGCGTTTGCATATATGACGAATCTGATGGAACTTGAACTAGACAACAA
TCAGATGCAAACCATCTCCTCGTATTTCTACAACGATAAAAGTCTTAGGA
GGTTGTCTCTTAGTAGTAACGACATCATGTACATCGGCTCTGGTGCCCTC
TCCACCTGTACAAACCTACAGGAACTTGTCCTGGATAACAACAAGGTGGA
CGATTTGGGCGGTATCGCGGACCATCTTGTTAATCTGCAGAAGTTATCTA
TGAGCAACAACCACGTCAGTCGTCTTAAGGCAGCAATGATCGAAGGCACG
CCGGCGCTACAGTTCCTTTATCTCAGCAACAATAGCATAGAATACGTGGA
TGAACTCGCTTTTATACATATGACTAATCTGAAATACTTGTGGCTGGACC
TTAACCGCATCCAGAACTTCAGCTTTGCTTTTCTAACAAATCTCGATATC
TTCAACATCAGTTACAATAGTTTGAGGTCGCTTCCGACCAACATGACGGA
CGCGTGGCAGCTTCAGGAGTTGATACTATCGGGTAACCCCATCCAAGCTC
TACAGCCGAACGGGTTTGCGGCGCTGGATCATGTGCATGAGATAGAACTG
GCCAACATCTCATGTGTCAAGTCTGGCTGTCTGGGTCCACGGTCTCTGTG
TGGTAATCTCGTCAACGTGGTCTTAGACAGCAACAACTTCACCGAGTTTC
CTAGGGGTGTCTTTGACTGTGCATCTCTGACAATCTTGAGCCTGGGCTAC
AATAACTTGGACCATCGCAGCTTCCACGCAGACGACTTTCATCCCCTGTC
ATACCTGATGAGTTTACAATTCCCGGGGAACAAAATCACCAACACATCTT
CCCTGGCACTTGCTATGCGGGCTATAGAACATCTCGCGTTTTTCGACATC
AGGCAAAACCCTATTGTATATTTACCAGAGGGCGCTTTCTCTATACCATC
GGTATCACGGGTCGACATGGGCGGCATGAAGCTCAGTGTGTTAGACCCGG
GGGCGTTCCACGGCATCATTTCCAGTGTCACAGAGCTGGACTTGAGCTTT
AACCGACTCCAGTACCTGCCAGGCCAGATATTTCACGGACTGGAAGATTT
TGCTCTAGTGTGGACCGACGGAAACCCTTGGAAGTGTGACTGCCAAATGT
ACGACTTCGCCAAATGGCTGCAGCAGACAGCCCCAGAAATAGACGTGTTC
TGTCACTCTCCCACAAACCTGAGTGGCAAAAACTTGAGGGACATTTCATT
GGAAGAGCTACAGTGCGATTGTATCCACAACGAAGCGCCCTCTATCGATT
CTACCGGGGGCGACAATCACACGGAGGTTGGGAGCAAAGCAAGACTGACC
TGCAACGTCACGAGTTGTCCCGACGCTGCCATAATCTGGTCTACCCCTGA
GGGAGTCATTCTGTCTGTGGATTCGGAAATGCCCCGGTTCACGGTCAACG
CAAACGGAACACTTATGATAGAGGACATTACAGAGTCTGACGCAGGGGAG
TACCACTGCACAGCAGTCAACTATCTCGGCAAGGATATGGCAACTGTTTC
CCTGAAAGTTAACTAATCGTAAAGAGCTCGTTACTATGACACCCTTTGTT
CTACTGTTGTCTCTCGTCCAATAAACATAAAAAGACTAGGCTTTTCATGC
CGAATGTTCTCATGGGTGGCTTTCTCCCATAACAGATATATAGCAACTAG
AGCTATACATGTAAACATTGTACGATTAGTTTAGCTGTATTGGTGTTTAG
GTTCATCAAAGAAACGCAAAGCTGAGATTTAGCAGCCTATGCGTTGACGG
CCTGAATGCATTACGCACTCACTCCGGCGAATATTATCGATAAAAAATTA
A Coding sequence (CDS) from alignment at Sc0000229:234208..237008+ >BlTCONS00113479 ID=BlTCONS00113479|Name=BlTCONS00113479|organism=Branchiostoma lanceolatum|type=CDS|length=2052bp|location=Sequence derived from alignment at Sc0000229:234208..237008+ (Branchiostoma lanceolatum)
ATGGCGGCTGTGGCGTTGTTACTTCTCCTTGTCCTCGTCCTCCCTACCGT
CCCAGCGTGTCCGGACGAATGCCGCTGTCTTGCCAAACAAACCACCGTGC
TCTGCCACAACTCCTCCTTCACAACCGTCCCAAAGGGCATCCCAGCCAAC
ACCACAATCCTGGAGATACGTCACACCAAACTCAGCTCTCTGCGGGAGGG
AGACTTCGCGAGCTTGCCTAACCTTGTGAACTTGACTGCTGACACAAACG
TCATCGGTACAATCGAGCCCGGGTCGTTTAGCGGGCTCCACAACCTCAAG
GTGCTCAACATCGCCAACAATAAGGTGTTCAAGCTGCCACCTGGACTATT
TAACGGTACACACAACTTGACTTCATTCGATGCTGCAAACAATGAGATCA
GAGCCGTCCCAGTCGGCCTGTTCACTCGCCACCCCTCACTCACCACCGTC
CAGCTGAGTAACAACAACATCTCAGTCATGGAGGAAGAGGCGTTTGCATA
TATGACGAATCTGATGGAACTTGAACTAGACAACAATCAGATGCAAACCA
TCTCCTCGTATTTCTACAACGATAAAAGTCTTAGGAGGTTGTCTCTTAGT
AGTAACGACATCATGTACATCGGCTCTGGTGCCCTCTCCACCTGTACAAA
CCTACAGGAACTTGTCCTGGATAACAACAAGGTGGACGATTTGGGCGGTA
TCGCGGACCATCTTGTTAATCTGCAGAAGTTATCTATGAGCAACAACCAC
GTCAGTCGTCTTAAGGCAGCAATGATCGAAGGCACGCCGGCGCTACAGTT
CCTTTATCTCAGCAACAATAGCATAGAATACGTGGATGAACTCGCTTTTA
TACATATGACTAATCTGAAATACTTGTGGCTGGACCTTAACCGCATCCAG
AACTTCAGCTTTGCTTTTCTAACAAATCTCGATATCTTCAACATCAGTTA
CAATAGTTTGAGGTCGCTTCCGACCAACATGACGGACGCGTGGCAGCTTC
AGGAGTTGATACTATCGGGTAACCCCATCCAAGCTCTACAGCCGAACGGG
TTTGCGGCGCTGGATCATGTGCATGAGATAGAACTGGCCAACATCTCATG
TGTCAAGTCTGGCTGTCTGGGTCCACGGTCTCTGTGTGGTAATCTCGTCA
ACGTGGTCTTAGACAGCAACAACTTCACCGAGTTTCCTAGGGGTGTCTTT
GACTGTGCATCTCTGACAATCTTGAGCCTGGGCTACAATAACTTGGACCA
TCGCAGCTTCCACGCAGACGACTTTCATCCCCTGTCATACCTGATGAGTT
TACAATTCCCGGGGAACAAAATCACCAACACATCTTCCCTGGCACTTGCT
ATGCGGGCTATAGAACATCTCGCGTTTTTCGACATCAGGCAAAACCCTAT
TGTATATTTACCAGAGGGCGCTTTCTCTATACCATCGGTATCACGGGTCG
ACATGGGCGGCATGAAGCTCAGTGTGTTAGACCCGGGGGCGTTCCACGGC
ATCATTTCCAGTGTCACAGAGCTGGACTTGAGCTTTAACCGACTCCAGTA
CCTGCCAGGCCAGATATTTCACGGACTGGAAGATTTTGCTCTAGTGTGGA
CCGACGGAAACCCTTGGAAGTGTGACTGCCAAATGTACGACTTCGCCAAA
TGGCTGCAGCAGACAGCCCCAGAAATAGACGTGTTCTGTCACTCTCCCAC
AAACCTGAGTGGCAAAAACTTGAGGGACATTTCATTGGAAGAGCTACAGT
GCGATTGTATCCACAACGAAGCGCCCTCTATCGATTCTACCGGGGGCGAC
AATCACACGGAGGTTGGGAGCAAAGCAAGACTGACCTGCAACGTCACGAG
TTGTCCCGACGCTGCCATAATCTGGTCTACCCCTGAGGGAGTCATTCTGT
CTGTGGATTCGGAAATGCCCCGGTTCACGGTCAACGCAAACGGAACACTT
ATGATAGAGGACATTACAGAGTCTGACGCAGGGGAGTACCACTGCACAGC
AGTCAACTATCTCGGCAAGGATATGGCAACTGTTTCCCTGAAAGTTAACT
AA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113479-exon-Sc0000229-1564993656:234208..237008 | BlTCONS00113479-exon-Sc0000229-1564993656:234208..237008 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000229 | genome | Sc0000229:234208..237008 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055683 |
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