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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000229:217372..225696+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113478 ID=BlTCONS00113478|Name=BlTCONS00113478|organism=Branchiostoma lanceolatum|type=mRNA|length=8325bp|location=Sequence derived from alignment at Sc0000229:217372..225696+ (Branchiostoma lanceolatum)
TGAAATTGAACATTTCATGAAAGGAAGTAAGTGAAAGGGTCAATTTGTGG
TGCGACGTTTTACCTAAGTGAACTTTTGTTCTGTCCGTACCCGTTGCCAC
GTGACCCGCTCTAACAGGTTGTCATTCTGTCCTTCTCGTTTTCAGGATGA
AGTATTGACATGACGGCCAGGTAAGATGGCGTTCCCGACGACACCGCCGC
CTGGCCCGGACTACACGACTCTGCTGTACGGGACAGAGGTCGTCCCCGTG
GTATATGACGCCGTGAACGGGACGCCTGTGTGGTCTACTTCCGGAACTTA
TAACATATCTTGTGGAAATGTGAGCGCTACCCTACCGCCGGAATGTAACG
TGACCGCGGCGCCGCCCTTAGACCCGCTGGGAGGGCACCAGGTCTGGGAG
GTGGTGCTCATATGTCTGCTCACCTGTTCTCTCAGTATCATCACCGTCGG
AGGAAACATTCTGGTCTTCGTGTCCTTCCGAGTCAACCGACAACTTCACA
CCGTCAATAACTACTTCCTCCTGAGTCTGGCGGTGGCCGACACCCTGATC
GGACTCTTGTCCATGAACTTGTACACCGTGTATATGGTGATGGGCAGGTG
GGCCTTAGGACCGGCCATCTGTGACCTGTACTTGACCGTGGACTATGTGT
GTTCCAACGCCTCCGTCATGAACTTGTGCGTGATCAGTTTTGACCGCTAC
TTCTCCATCACCCGTCCGCTGACGTACCGCGCCAAGAGAACCCCGAAGCG
GGCGGCCTGGCTGATCGCCCTGGCCTGGGTGACGTCCGTGCTGGTGTGGG
CACCGCTCATCGTGGGCTGGCAGTACATCGTGGGCGGGAGGAACGTACCG
GAGGGACAGTGCTACATCCAGTTTATAGAGGACAGTGTTTACGTCAACTA
TTTAACCATAGCAGTGGCCTTTTACATCCCGGTCATTATCATGTGTACTC
TGTACTACCGGATCTACAGGGAGACTCAGGAGAGACAGAAAAACCTGTCT
GTACTGCAAGCAAGTAGCAAGTGTACGCCTTCTTCAACGTCCTTGGTAAA
GCTATCTCAAGGAGAGGGTAAAGCGTACGGCACTGTAGTTCATAGTGGAA
AAAGCCGTTCATGTCCTAATGTCTTAGAAAAAGGAACATATAGAGACGAT
GATTTAACACCAGATGCTGAGAGCTCTGGTAGCATACCCACCAGCTCAGC
TTCAAAAACGGAACAGACTGTCACTCAGAAGTCGACAAAACACAGTTCAA
AACTGAAGAAGTACAACATCATGACCAAAATATCAGGAGATGAAATAATC
GGCAAGAAGGCTAAAATGCCGGCAACGGAAATCATAGATGACCCAAACAC
CCGGGCTCCTAAACTCGGACGCAGGCGTGGCCATGGTGTTCTACTTACTA
CAACGCATGCTCACTACAACAAGAGCCGCAGGAGAAGTGGAAGTTTTGCC
GACTTACTGAGAAAGAGTAAGGCTCTACGAATGTTGAGTGCAATTCTCTT
AGCTTTTGTCATTACCTGGTTACCGTATAGTGTGACTGTGCTATTCAAAC
CTTTTTGTACAGTGCCACAGACAGTTTGGGACGTAGTGTACTGGCTGTGC
TACGTCAATAGCACAATCAACCCTTGGTGCTATGCCTTTTGCAACAAGAC
ATTCAGAAAAACGTTGAACAACGTTCTGATTTGCAAGTACTGACAATTCC
TTCTAAGCTTTAACTGTAGAGACACCTACGAAGCAGCAGAAAAAGTGTCC
AGAACATGAATCTATTGATCAACCAGGACCTCCGTATAACAACGCCTTAG
TGTTCACGTGATGATAACTCAGAATCTGTGAAAATGTTCATACGATGGTG
TTCAGCACCAAGGACAGGAACTACGACACCGTCCACATGATTGTGNCTAC
CCTACCGCCGGAATGTAACGTGACCACGGCGCCGCCCTTAGACCCGCTGG
GAGGGCACCAGGTCTGGGAGGTGGTGCTCATATGTCTGCTCACCTGTTCT
CTCAGTATCATCACCGTCGGAGGAAACATTCTGGTCTTCGTGTCCTTCCG
AGTCAACCGACAACTTCACACCGTCAATAACTACTTCCTCCTGAGTCTGG
CGGTGGCCGACACCCTGATCGGGCTCTTGTCCATGAACTTGTACACCGTG
TATATGGTGATGGGCAGGTGGGCTTTAGGACCGGCCATCTGTGACCTGTA
CTTGACCGTGGACTATGTGTGTTCCAACGCCTCCGTCATGAACTTGTGCG
TGATCAGTTTTGACCGCTACTTCTCCATCACCCGTCCGCTGACGTACCGC
GCCAAGAGAACCCCGAAGCGGGCCGCCTGGCTGATCGCCCTGGCCTGGGT
GACGTCCGTGCTGGTGTGGGCACCGCTCATCGTGGGCTGGCAGTACATCG
TGGGCGGGAGGAACGTACCGGAGGGACAGTGCTACATCCAGTTTATAGAG
GACAGTGTTTACGTGAACTATTTAACCATAGCAGTGGCCTTTTACATCCC
GGTCATTATCATGTGTACTCTGTACTACCGGATCTACAGGGAGACTCAGG
AGAGACAGAAAAACCTGTTAGAGCTACAAGGAAACACAAGTACCAGAACA
TCGACACGATTCCGGAACACTTCAACTATGTCCACTACATCATTCCTGAC
AAACTCTACAATCAAATCTAACTTGTCCACAGCTACTATCAAGTCTACAG
CAAGTGTCGGTTCTAGTATATCCCGAGAGCCTATTGCACTGAGTAGTATA
GAGGAAGGATCAACAAGCAGCAGTCCACCCAGAAGTAAGCGTTTTTTCTC
ACTTTGTAGATGTTGTGCCGGAAAGTCTGCCGAAGATAATGACTCAGCTG
GAGACATGAGTAACTTCAGCACCCCGAGTGACCACGCGAAGGTCCTGATG
AGTGCTGCTGGCCCTAGTTCGTTTGTAGACAAGAAGGCAGGACCGGCCCT
GGAGATGAGACATGTGTCTCTGTCCGTCCCCAACGGGAAGGCACATCGTA
TGGCCCCGCCCAAGACTGAACACCCTGCCTCCAGGTATCGCATCGTTATC
AAGCTGCCCGACGAATCGTCCACAGACCCCGAGGACCAGAAGCCTAAAAT
AACGATGACTCCCGATTCCGACGATTCGGACGACAATCTCGAACTGAAGG
AGATGACGCCATCTCCCCGTCCTAGTCCTGAGCCCGTCAAGCCGCGGCCG
TCACTTGCAGCTTCAAGGCCAAAGCTGAGTGCAGCACAGTTGTGGAAAAA
GGCTGCCGAAAACACTACACGAACTAAATTAAAAAGTGATCGTGCTAGAA
AAATCTCAATGGTTCTAAAGGAAAAGAAGGCGGCAAAAATGCTGAGTGCT
ATCCTCTTGGCGTTTATAATTACTTGGTTACCATACAGTGTAACGGTACT
GTTGAAGCCCTTCTATAAAGTGCCAGCGACCGTCTGGGATGTGGGGTACT
GGTTATGTTACGTGAACAGCACCATCAACCCGTGGTGTTACGCACTTTGT
AACAGAACGTTCAGAAAAACCTTCAAGGACATCCTGGTGTGCCGGGTAAA
GAAACAGAGCTTCAGACAGCTGCAAAGCAAAAGACTGTACTAAACATATG
TGGGTAAGATAGTTCATTTTGATAACACTCACATAACAAAAACAATGTCA
ATGGTTAACTTCACTGTTATGGATAACGTAAACAGATATAGACAAGTAAT
ATTTCACAAAAATAATACAGGATTGAATCAGTTGTAGGATAAACAAGATG
TCTTCTGTACGTTTTAGGCATTGTTAGCCATCTTCAGACTGTCTGTATAA
CTCTGTGTGTAACCCATGTGTCTGCGCCATATTGGCGTCCTTCAACAAAC
ATGTAGTCAGCGGTGTTTGTATTTACGATGTGGTGGGGTAGAATCCCAGC
GTCCTGTCCTAGGAAAGCTGTCCAGCTGTGGCGCAGACGTTAAACATTCA
TGTAAAACCAATGAAACGTTTACAGTCGATACATATTCCGTCTCTCTGCG
GCCTTTGAGTGGGCGACCCGGTAAATAGGCATCTGACAGGTGGCCGCCAT
GTTGGAAAGGACAAATAGTGTCCAGAAGTGTCAAGTCACCACAACTATGC
GTCACTGATAAATGGTGACAGAAAGCTTGGCATTCTACAAAGTTATCTCA
TATAGCAACCACTCACCAGCTAGACGGTTGTCTGTCAGATCTTTCAACAA
CAGTATAGCACGACGATGCCAAATTACTGATGACCTTCTGATAAGTTAGA
CAATGGACCGTTCGTCAGATTGGTGCCTCGTGTTTGTATACGTAATAGGC
TAGAGTTGATCTAGGATTCTGATTCAAGTGGTAACGCTTTATGATATCAA
TGGTACGGTCTTGTTCTTGTCTTACTGTTGTACCAGGCCGATAAAACAGG
TCTGTGAAAACCGTGATGTGCCGTTTCTGTCAGAATAGCACAAGCATAGC
ACACTTAGCAACCTATATGGTTTACCGTGCTGTTTCTATTACACTTGTTG
CAAACGTAAAGCAAGAAGTTAGAAGAATTGGATTACGATATTATGTGTAG
TATTTGTAAGACTAGATCTTATGAAATGTACAGTTGTAACGACCAAGGAG
AAGACCCTCCTTTGAACGACCAAATATCCTTCTGTACATATTCTAAATAG
ACACAACAAGCCAGTTATCAGCCTCTTGCCCTTTGTGAACTATTGTATTA
GTAATTGAGATAGCCTAATTATTTAGATGAGAACGAGTTTTTAAACTGCC
TCCTTTAGAGTGTTAATGTATTTGTATGTTATATATTTGTAAAGTACACG
AAGATAAGAGACTGGATAACCATCAAAGCCTTAAACGCACGAACAGATTC
TGTACTACAAGGATGTATTCTACAATAGGAAGTTATCTGTTATAAATTTA
TATGGTATGGCAAATGATGTTAAAAGAGATGGAAGCTCAGAACTATGGAA
TAGTCCTGTATATAAACTAAGGCAACTTCTACATTAGATTTCACTAGTAC
GGAAGAACGACTAAGTTACACTTATTGAGTTATATTTTATACAAGGCACG
CTAGTGCGTGTTCGGAGCTGTTCTGTTTCTACCTGTTGAGCATAGCGATG
GCGTTAAGCTGTTATCTACTAGTAACGACGTGGACCACCCCAAACTAGTC
GTGACCTTTTAACCTTTGTAACCAATGGTGCATGTACAGAGCACGCTTTG
GGCGTTCTCTCATGGTGAACAAACTTGTTTACTCAATGTCACACATGCTT
TTAGGACGTCACTGGTGCCGTTTCAACTACAGACAGGTATTGTTGAGCTA
CAGGTTGTATATATGAGTATAGTAGCTTGGCATAGATCCTCTCATATTGT
ATGGTATTACACACAAAGGCAGGGGAGGCAAGAATACAAAGTCCATGTCA
TTTGTCATTGTGTGGCTGATGCAGCTTTAATTCAACAAACTAAATCATAA
ACAAATAGGTTAAACACCCTTAACACTAGATTTTCACTTGAAGCAGACTA
GTATACGCAAAAAAAGGGCTGCTATCACTGTAACACAGTATCCTCATAGT
CTATACACTGTCACAATTAATCTGAAACGTTTCATTGGCTGTTCCTTTAA
GGTTTACTGGCATAGTTTATAGATTATCAAGGACAATGAAAACTTTGTCC
TTTTTTTCTGGTTTTGCTTACGGCTGGACATGACATTTTCCCGCCAGTAG
CTCACAGATGTCACTCAAAACATTTCCTGATGCTAGCGGAAAGATTAATG
ACCATTTTGGGTCTGATCTTTACTTCTCATATATTTGTAGATTTGTTGAC
AACAACAAGTACTGATGGAAGTACATGAATGATTCAATAGCTAAGCTGTG
TTCAGGTTTGACGGTGGATACCAATAACACAGAGGAAGGAAGCCGGGGAT
ATCGGCCAAATGTGAACACAGGAACTTTGTAAATATTGTACACCTTAGTC
AGTCAGGATATACAGTACACCCCACAAAGGACACAGCATAAAAACCGTGG
TCTAATCATTGTAGTTTCTATACAGCAGTTTCTAAAGAAGCGGTGAGCCG
AAATACAACATCTGTGTCCTATTTTCCACGTAAACTGTAACATGTTTCAC
CCATCACAGGTGAATGGTTCTAGCCCGTAAAAACGTCCCATTATACACCT
CACCCATCCTTCTAGTCATTACAAGCTTATAGTGTCGATATTTGGGGTGC
CGATATTGGTATGCATGCGCTTGTTCACTCAGAAAGGACTGCCAACGACA
GTGTACATCTAGCTAGCTTACGTTAAGTAATGCATGGAAAAGTGTGCCTT
GAAGAGACATCATTTGCTTATCTGTGCTCATCATATTGTCATTGGATTTC
TTTATAATGCCAAAGACATTGTGCTCAGCATCAGGATAAGTCCTACCGAG
AACGCGTACTTGTAGAAGGAATTGCATTAGAGGGGACTGTAAGCCGGCCA
GTATTTTTATATGAACGGAAAGCTCGGGTAAATTGAAATCTTATCTTTCC
TTGAAACGACACCGACACTTTGCTTTTAGACAAAATATATACTTATTGAT
CCCCGAGGACAAAAAAATCATTATCGGCAAACCTCAGAAATAGGATGTCT
CATTTCAGAAATTGGGTTATTGTCGCAATGTATCTTTCCCATGATCTAAA
AAGGCGTAAGATTCGAACTGGTCTGTCAGCCCCTGGCTCTTAGCATCTGA
TAAGACGTAATGAGGAATCGATTCATGCATATCGTTATGGCTCCTTGATG
AGAAGATGGTAATCTTAAGTACTGGTTGAGTTTGCGGTCTGACAGGAGTG
GCACCAGCCTCTGTTGTACATTACAGTCTGGCCTACTTTTTCAACAAAAA
GCTTTACAAAGTAACATCTGTCACTTCTAAAGCACCAGACACAAATTCCC
AAATTGATTTTCCATCGAATACAAAGCTAACAACACAATCGACTCGGGAG
ATGGGTGAGTGGGATAGCAGACTCAATTGTGTTTAATTGTAATCGTTTGG
ACTACACTGACTCCAGGAAGTTAGTTTATATTCTCTATTGAGATCTTTGA
ATGTCTAGTTTGCCATCAAGTAATAATTTCTCTTCGCCGTCGATGAACTG
TGATTCGTATATCGTGCATAACTGGTGTAGGTTTGCGTATACCGTGATTA
CTGCCAGCTGAATTTTATACGTCCACTGTTGCTCGTGACTTCAGTCGATC
GTTACTTCGTGACAAAAAAACAATTAAGACCAAAACTAGGACACAGAAGG
CGTCTTGAATGACGTGTCCGCTTTCTTCATGCCAATACCAAAATCCACAC
CACCTCACGACCGTGACTGCTTTGGTGCATGGTACATGGCTGCACGCTTT
TGTACAGCCACATGCATGAGTTGGTCTTGTTTTTCTCATATGAAGGAGAC
AAAGATGTTCGATCCTCTACTTTCCTCATTGATCCGGCGCCCTTATTTAC
GTAAGTCCTTTCTTCAGCTGACCGTCTGATAAACATCTTGGTGAATGCCT
GGAGGGAATGTAGGGAATGTAGGGAACGGTAGGAATCGATAGAACCAACC
AGCACGTAAGGCTGTTTATGGGGCTTAAGAGCCAGACTCTTACTAAATAC
GTCGTGTAAAAGCTTACATCGTAAACCTATAGTCTCTACCAATCTGACTA
CGCTGAATAGATAGGGAGAACAATGGTGTCAGGGGAGTTTTGCTGCAAAG
GGGTTGACTGGCATCTGGAGGGGGTGGGGGAGTCGGCTGTAACATTTCCC
GTAGACTGACACTCCTAGCAAATCATTCCCTTTTTTGGTGCCGAATTCTA
CGTTCTCTACCCCCGCAGGTACGCCTGGTGGAGGCTAGTATACATATATG
GTACGTCTAACATGTGTCATTCATTCATTGTATTCATATAATGTCCACGA
GTCTAAAGTGACAGTTAATTCAAGAGCATGTAAAACATTTGCCCAGTTCT
TTATCTGTTTTCCACTGAGGTTCCGTAGACAAGTGTCTTTGTGACGATAT
ATATGTGTTATATCTAAATATATATATATATATATATATATATATACATT
ACTATAACTATAACCTCTATCTGTACAGATGTTTGTATGTACCGTTAGTC
TATTTCTGTACGTCGCGAAGGCACAGCGTGTTAGCGAATAAGGCAGGATC
CTTAACAAGACCACAGGTGTACATAGTAGATGTGTATATTCATAACCTAG
TGTGGCATAGCTGGCTTTGCTGTACGTACTGAAGGGCTGGAATATGGTGT
AGAGGTATGATAAAATGGTGTTATAAAGTTGAGTAATGGCCTTGACTATT
AGATATATGTATATGAATAAATCAC Coding sequence (CDS) from alignment at Sc0000229:217372..225696+ >BlTCONS00113478 ID=BlTCONS00113478|Name=BlTCONS00113478|organism=Branchiostoma lanceolatum|type=CDS|length=1749bp|location=Sequence derived from alignment at Sc0000229:217372..225696+ (Branchiostoma lanceolatum)
ATGGTGTTCAGCACCAAGGACAGGAACTACGACACCGTCCACATGATTGT
GNCTACCCTACCGCCGGAATGTAACGTGACCACGGCGCCGCCCTTAGACC
CGCTGGGAGGGCACCAGGTCTGGGAGGTGGTGCTCATATGTCTGCTCACC
TGTTCTCTCAGTATCATCACCGTCGGAGGAAACATTCTGGTCTTCGTGTC
CTTCCGAGTCAACCGACAACTTCACACCGTCAATAACTACTTCCTCCTGA
GTCTGGCGGTGGCCGACACCCTGATCGGGCTCTTGTCCATGAACTTGTAC
ACCGTGTATATGGTGATGGGCAGGTGGGCTTTAGGACCGGCCATCTGTGA
CCTGTACTTGACCGTGGACTATGTGTGTTCCAACGCCTCCGTCATGAACT
TGTGCGTGATCAGTTTTGACCGCTACTTCTCCATCACCCGTCCGCTGACG
TACCGCGCCAAGAGAACCCCGAAGCGGGCCGCCTGGCTGATCGCCCTGGC
CTGGGTGACGTCCGTGCTGGTGTGGGCACCGCTCATCGTGGGCTGGCAGT
ACATCGTGGGCGGGAGGAACGTACCGGAGGGACAGTGCTACATCCAGTTT
ATAGAGGACAGTGTTTACGTGAACTATTTAACCATAGCAGTGGCCTTTTA
CATCCCGGTCATTATCATGTGTACTCTGTACTACCGGATCTACAGGGAGA
CTCAGGAGAGACAGAAAAACCTGTTAGAGCTACAAGGAAACACAAGTACC
AGAACATCGACACGATTCCGGAACACTTCAACTATGTCCACTACATCATT
CCTGACAAACTCTACAATCAAATCTAACTTGTCCACAGCTACTATCAAGT
CTACAGCAAGTGTCGGTTCTAGTATATCCCGAGAGCCTATTGCACTGAGT
AGTATAGAGGAAGGATCAACAAGCAGCAGTCCACCCAGAAGTAAGCGTTT
TTTCTCACTTTGTAGATGTTGTGCCGGAAAGTCTGCCGAAGATAATGACT
CAGCTGGAGACATGAGTAACTTCAGCACCCCGAGTGACCACGCGAAGGTC
CTGATGAGTGCTGCTGGCCCTAGTTCGTTTGTAGACAAGAAGGCAGGACC
GGCCCTGGAGATGAGACATGTGTCTCTGTCCGTCCCCAACGGGAAGGCAC
ATCGTATGGCCCCGCCCAAGACTGAACACCCTGCCTCCAGGTATCGCATC
GTTATCAAGCTGCCCGACGAATCGTCCACAGACCCCGAGGACCAGAAGCC
TAAAATAACGATGACTCCCGATTCCGACGATTCGGACGACAATCTCGAAC
TGAAGGAGATGACGCCATCTCCCCGTCCTAGTCCTGAGCCCGTCAAGCCG
CGGCCGTCACTTGCAGCTTCAAGGCCAAAGCTGAGTGCAGCACAGTTGTG
GAAAAAGGCTGCCGAAAACACTACACGAACTAAATTAAAAAGTGATCGTG
CTAGAAAAATCTCAATGGTTCTAAAGGAAAAGAAGGCGGCAAAAATGCTG
AGTGCTATCCTCTTGGCGTTTATAATTACTTGGTTACCATACAGTGTAAC
GGTACTGTTGAAGCCCTTCTATAAAGTGCCAGCGACCGTCTGGGATGTGG
GGTACTGGTTATGTTACGTGAACAGCACCATCAACCCGTGGTGTTACGCA
CTTTGTAACAGAACGTTCAGAAAAACCTTCAAGGACATCCTGGTGTGCCG
GGTAAAGAAACAGAGCTTCAGACAGCTGCAAAGCAAAAGACTGTACTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113478-exon-Sc0000229-1564993656:217372..217397 | BlTCONS00113478-exon-Sc0000229-1564993656:217372..217397 | Branchiostoma lanceolatum | exon |
| BlTCONS00113478-exon-Sc0000229-1564993656:217517..225696 | BlTCONS00113478-exon-Sc0000229-1564993656:217517..225696 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000229 | genome | Sc0000229:217372..225696 + |
Properties
| Property Name | Value |
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| GeneID | BlCUFF055682 |
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