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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000229:3205..8511+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113446 ID=BlTCONS00113446|Name=BlTCONS00113446|organism=Branchiostoma lanceolatum|type=mRNA|length=5307bp|location=Sequence derived from alignment at Sc0000229:3205..8511+ (Branchiostoma lanceolatum)
CTAGCTGCTGGACTACTTGCCCTTGGCTTCCAACCAGGCGACCGTCTGGC
AGTCTGGTCCCCTAACCGGTACGAGTGGGTGTTGACACAGTATGCAACTG
CCAGGGTCGGCATAATACTGGTGGCAGTCAGCCCTATGTTTGGGCCAGAG
GAACTGAAGTATGCACTGAACAAGGTAATATTATCCACAATATGATCATA
ATAAAAAGCAATCACAGCACATCATACAAAAATTTTCAGGATTAGGCATT
TCAATATTAATAACATTGTACATACCAATATTCCAAATGGAAATGAATTT
AAATCTATAACAATCACACTTTTTGGATCAATTTATTGTAAATCTTCATT
AATATTGTGATGCACAATTATACTGTAATTGTACTTCAATATAACTTGAA
TAAATGTTTCTACATAAGTTGAAATGGTTCTGGTATAACTGTTGGCAGCA
CATATAAGTTGACTGATAACTTGGAACTACTCAGTTTCTCTGCCAATAAT
GAATTAATTACAATAAGATCTTTTCTTTCCTTCAGGTGCAGCCTCAGGGC
ATTGTGATTGCTCCAACATCTCCCAAGAAGGACTTTCACAAAGTGCTGAT
GTCTGTGGTCAACTCAGATGCAGGATCCTCCAGTCTTAGTCAGCTGAAGA
TCATCAGTATGGAAGGGGAAACGGAGGGGTAGGCAGCTGATTGTTTGTTT
GTATTGCACACCTGATGAACAGCCTCATGGCATAACACACCAGCTGTGTA
CTGAATAGTACTGGCTGCATACTAGTATATGGACAGATTTATTTATCCAC
TCGCACTGACATATGTGATTGTCTACTCAAAAAACTTATTGAACATCACT
GTCAGGAATTCTGTGAATAATTCAAATTATCCTTTTTTCCATGTAACTTC
AGTGATGTTCTACAGTTTGAGGATGTCACCAAGAAAGGAGGACAACAGGA
AGTGGGGAGATTGAAGCAGCTACAGCAAACTCTCCAGCCTGACCAGCCAA
TACACATAGCCTTCACATCGGTAATGTATGGATGGAAGTTTTAGCTGATA
AATGTTACTGCCATTTTTCACATTCCTTAAACCTTGCTTCAAAATATTTT
ATCACATTGTATGAAAAGTTAAGCAGTACAGTTTCTGCTCTAACAACATG
TTCAAGTTCCAAAGTAGCTGGCATCAATCACATTGTAATCCATGTTGTCA
TGGAGAGAATAGTCATCACATTTTCACTTTCAGGGCACTACTGGGCCTCC
TAAAGCACCAGCCTTCTCTCATCGCCATGTGATCAACAACTGCTACTTCA
CTGGCCGCAGACTCAACTATCATGAGGAGGTAAATGGGAGGTTTGAAATG
TTTATGAAAACAACAAATCAATGGATTTCATCAGTAGTCACATCACACAA
GTTTGGATGTTTGTTTACAAGATGTGACATTGTTGATGCATGGATAACCA
TCTAAGACACTACAACAGGTGTCAGAAGGTGTAACACACAATGTTTCCTC
CAGGACCATCGCCTGTGTGTTCCCATGCCCATCTGGCGTGCCCTGGGGAT
GATCGTGTGTAACCTGAACCCACTGGTGTTTGGCCACACTGCTGTCTACA
GCGGTCCTGACTTCAATCCTCTAGCTGTGCTGGCAGCCATTGACAAAGAG
AGGTAATAATGTAAAACACAATGTTGTATATTGTTTTGGTAAAAATGGCA
CAGCATCTCTGAATAAAGCAAGCCATTTCTGTTAAAACACCACAATGGTT
CGGAATGTCACCACAGAAATCTATTTGACCAATGAAAGGTTTGTTTCTTT
TCCATAGGTGTACATCAGTGTATGGTAATTCTCCAATGCTAATGGCCCTA
CTCAAGCAGCCTACTTTTGGAGACTATGATGTCAGCAGCTTGACAACAGG
TAACAAGTCACAGTTGTTTGTGAATGATGCACTTAAGATATGTATCAATA
TAAATGAATGCTTGAAATTATACTATTATAGGCTGCTGTGTGAGTGTGTA
CGTTTAGGAACTGACCATGATTTTGTATATTTTCCCCAGCCATGATTGGT
GGCCAGGGTATCGGAGGTTCTGACCTGCCACTGCCGATGCTGCAGTTGTT
TAGACAGAAGCTGCATCTCACCAATGTGACGGTAATTTTTTACAAGAAAA
TTAAGTTGTTTATGTTCTGGCCCGGCATCCTTCCTGTGTTTAAAGCATCT
TTTATTATGTGTGTTTGTCAAAGGAGTATTGAATTGAAGAAGTGCACAGT
ATCAGATATTTTTTGACTTGAAGATTTGTTTGTTTGATCCCTTAGTTTTT
TTTGAATATGTTTCTCTGTGTGTACAGGTTGCCATGCCGATGACAGAGTG
TGGCCCAGTAGCCTTCCAAGGTGTTCTGGGAGACCCAGAGGAAAAGCTTA
CGTCAACTGTGGGCCGTACCCTCTCCCATGTGGAGGTAAGATGTTTAATG
AATGATAGATGAAATGGGAAGTGGCTTAGACCAAGATGATAGCAGATAGT
AATTGTAGCAAGTTGGCAACCCTGAGAAACTGTAACACAAGACCAGAAGT
GGTATGGAGGTGAGTGCGGTACCCATATTATGCTGGGTTATGGGACCCAG
GCAGCAATTAAGACACTAGGCAAGGCATTATGATTATGGCATTAACCCTT
GTTAGTCTATATGGAATATGTGGGTGAATATTGAGTTACTAGGGATATAA
GAAATTACTGCATTGTAAATGTTGCTGCTGTCTTTACAAAACAAGTTACA
TTGTTTTTACTGGAATGCCTTCCAGGTGAAAGTTGTTGATGAAGCTGGCT
GCACCGTTCCTGTGAACACTCCAGGGCACTTCCTCACCCGTGGGTACTAC
ATCATGCTCCAGTACTGGGGTGATCAGGAGAAGACAGACAAGGCTTTCAC
TGCAGATGGCTGGTTCCAGACCGGGTGAGTTGGAAAGATTTATCACAATT
AAGGGAGCAAATTCTCTGTAGCTTTAATGAAGGATTGCAACAGTTAAAGA
TTTAACAGTTTCAAAATATTTGTTCTTCAAAACACCATTTTTTATGTAAT
TGAAAGAATCAAGATGAAGACTTAGTGTATTATTACTATGGGAAGACCCA
TATTCAGATATTTTACTGGGGTTTTAATGAATGAAGCTGTTTTTTTTTCC
ACTCATCAGGGACTTTATATCTATGGATGAGGATGGGTATGTTCAGCTGC
TTGGGAGGGAGTCCGAACGTATCAAAGTCGGAGACAGCTACATCTTCCCT
AAAGAAGTAGAGAATGTCTTGAGGTCCCACAAACAAGTCAAGGATGGACA
GGTAAGACCAACTCAGATACTGCAAGCTAAGAGTGTAAATTCAGTCAGTT
ATAAGAAATTTAAGGGCCTTCTTAGTTACAGGCAACTTAGTTCAAAATTC
TTCTTTTACGGAAGTGTTGATCTAAGCTACCCTAGACCAGGTACTTAATT
GATTGGAAAGGTGGCACTATCAGCAAAATGCTGTTAAACATCATGTACGG
GACAATTGGTCTACAATAAAATGAACAATGCATGCTCCTGCTAGGCATTC
AACTTATCTTTTTTGTTTGAATGTGTTTTCAGATAGTAGAGTTGTCTGTT
TCTGGAGAAACCAAGCTGTGTGCCTGTGTTGTACTGGAGAGTGGAGCATC
ACTATCCGAAACAGACGTTTTGGATTTCTGCAAGGATAAGGTAATGTCAA
TACTATTAGTCATCTTTTTAATTCTAGGTGACAAGATTGTAGATCGTATA
AAGATGAAGAAAACTCACAGATATTATCAGATCACATAAAGTTCCTGTGC
ATTATTTTTATTTCATCTATCATTAAAGGCAAGTGATATTAGATAACTGA
ATCTCCATGTAGCAGGAAAAGCCTTTTTATGCTATATTAAATTGGCTTGC
AAATTCATGTATCTACAAGACTACCAGAGTGAGTGAACAAATTAACTGAA
ATGTAACTCCAGGTTTCTTTTTTGTCATAACCAGCTGCCGGCTTTCCAAG
TACCACAGTTTGTGTGTTTCTTTGACACTTTCCCCCTGACTCCTACAAAA
AAGGTCAGTACTCATGATGCAAGCTTGATGTTTTTACATGAGATTACTTT
TAAGCAGATTATCTCTGTCTGTTTCCTTGATATGTAATCTTTTGTATACT
ACATAGCTTGACAACAATTACAGAAGGTGCTGCAGATGCATGTACTCTTC
CCAAAGGTTGATGACCTGGCATCTACATGTTTACTTAACTACTATCAGTT
CTTATATTCAATGACTAGCCATGTAGCAGATACATATTGTACTGTATAGG
GGCCATTACAAATTCACACCATTCCAGCATATGCCATTGATACTTTTCAG
ACCTTCTTTCTCTTCAGTCTTTTGATACACAGTGAATAAGAAAGCAATTA
TTATTTTGTTATCGGAAACAAGAATAGAAAAGTGAAAAAAACATTGAATG
CCTCTTTGTCATTACAGGTTAAGAAGTCGGAAGTGAAGCTGGAGGCTGAA
AGGAAGTTAAAGCTGTCCTAGAGCAACTGGTCTTCCAGAGGAGTCTGATA
CAAGTTCAGTAAGGGTACAACAATTATCAATTGTGGAACATGGTGTGGAA
ATATTTACTTTTATCTAACTATAGGTGATTACTGCATGACAGGATGGAGT
CATCTCTTGCCCTACATGTATGTCACAGGGGCATTTTTCAATTCTAAGAA
GAACCTGTGCATAATATTATAATTTGTTATGCCTTCAATATCAACAAAAT
TATTTTAAGTCAACAAATTTCAATGGAAAATTTTTTTAAAGTTTCTCAAC
ATTTCTAAAATATCTTTTTCTAAATTTCTTAGTAATTTTAAGAGATACCA
TTGTTTACATGACACACAGTTAGTTGTGCTTCAAATGGGTGTTTCAAAAG
TAGAAGTTACATATAACATCCTGCCTCAGTACGTTGCGAGACACTCATAT
TGCTACAATGCTGTATATTGTACATGGACCAAATGCCTCCCATGATCAAA
TGTAAANCTCCCATGCATGATCAAATGTAAAGTGTAACCTTTGTATTGTT
ATGTACACGAATCTAGATACGATTTTCCTCATGAATGGTGTGGTTAGAAG
ATAAAAAATCAACTTGTTTTTGAGTGTACACTGTAGGAAATGGCAAATGC
AAACTTATCTGTTCAGAAAACTTATTGAATTACATGAGAAATGATATCTG
AAACAATTGCACAAAGGTTGTAGGGAAATATAGAAAAACTGTAGAGAAAA
TTTTGGCAGAAATGAATGTTAACATAGTTTATGGTGATTAAAGTGCTTCA
GTCGAAC Coding sequence (CDS) from alignment at Sc0000229:3205..8511+ >BlTCONS00113446 ID=BlTCONS00113446|Name=BlTCONS00113446|organism=Branchiostoma lanceolatum|type=CDS|length=942bp|location=Sequence derived from alignment at Sc0000229:3205..8511+ (Branchiostoma lanceolatum)
ATGCCCATCTGGCGTGCCCTGGGGATGATCGTGTGTAACCTGAACCCACT
GGTGTTTGGCCACACTGCTGTCTACAGCGGTCCTGACTTCAATCCTCTAG
CTGTGCTGGCAGCCATTGACAAAGAGAGGTGTACATCAGTGTATGGTAAT
TCTCCAATGCTAATGGCCCTACTCAAGCAGCCTACTTTTGGAGACTATGA
TGTCAGCAGCTTGACAACAGCCATGATTGGTGGCCAGGGTATCGGAGGTT
CTGACCTGCCACTGCCGATGCTGCAGTTGTTTAGACAGAAGCTGCATCTC
ACCAATGTGACGGTTGCCATGCCGATGACAGAGTGTGGCCCAGTAGCCTT
CCAAGGTGTTCTGGGAGACCCAGAGGAAAAGCTTACGTCAACTGTGGGCC
GTACCCTCTCCCATGTGGAGGTGAAAGTTGTTGATGAAGCTGGCTGCACC
GTTCCTGTGAACACTCCAGGGCACTTCCTCACCCGTGGGTACTACATCAT
GCTCCAGTACTGGGGTGATCAGGAGAAGACAGACAAGGCTTTCACTGCAG
ATGGCTGGTTCCAGACCGGGGACTTTATATCTATGGATGAGGATGGGTAT
GTTCAGCTGCTTGGGAGGGAGTCCGAACGTATCAAAGTCGGAGACAGCTA
CATCTTCCCTAAAGAAGTAGAGAATGTCTTGAGGTCCCACAAACAAGTCA
AGGATGGACAGATAGTAGAGTTGTCTGTTTCTGGAGAAACCAAGCTGTGT
GCCTGTGTTGTACTGGAGAGTGGAGCATCACTATCCGAAACAGACGTTTT
GGATTTCTGCAAGGATAAGCTGCCGGCTTTCCAAGTACCACAGTTTGTGT
GTTTCTTTGACACTTTCCCCCTGACTCCTACAAAAAAGGTTAAGAAGTCG
GAAGTGAAGCTGGAGGCTGAAAGGAAGTTAAAGCTGTCCTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113446-exon-Sc0000229-1564993656:3205..3378 | BlTCONS00113446-exon-Sc0000229-1564993656:3205..3378 | Branchiostoma lanceolatum | exon |
| BlTCONS00113446-exon-Sc0000229-1564993656:3740..3882 | BlTCONS00113446-exon-Sc0000229-1564993656:3740..3882 | Branchiostoma lanceolatum | exon |
| BlTCONS00113446-exon-Sc0000229-1564993656:4107..4224 | BlTCONS00113446-exon-Sc0000229-1564993656:4107..4224 | Branchiostoma lanceolatum | exon |
| BlTCONS00113446-exon-Sc0000229-1564993656:4438..4535 | BlTCONS00113446-exon-Sc0000229-1564993656:4438..4535 | Branchiostoma lanceolatum | exon |
| BlTCONS00113446-exon-Sc0000229-1564993656:4708..4856 | BlTCONS00113446-exon-Sc0000229-1564993656:4708..4856 | Branchiostoma lanceolatum | exon |
| BlTCONS00113446-exon-Sc0000229-1564993656:5012..5103 | BlTCONS00113446-exon-Sc0000229-1564993656:5012..5103 | Branchiostoma lanceolatum | exon |
| BlTCONS00113446-exon-Sc0000229-1564993656:5244..5335 | BlTCONS00113446-exon-Sc0000229-1564993656:5244..5335 | Branchiostoma lanceolatum | exon |
| BlTCONS00113446-exon-Sc0000229-1564993656:5532..5639 | BlTCONS00113446-exon-Sc0000229-1564993656:5532..5639 | Branchiostoma lanceolatum | exon |
| BlTCONS00113446-exon-Sc0000229-1564993656:5980..6128 | BlTCONS00113446-exon-Sc0000229-1564993656:5980..6128 | Branchiostoma lanceolatum | exon |
| BlTCONS00113446-exon-Sc0000229-1564993656:6364..6505 | BlTCONS00113446-exon-Sc0000229-1564993656:6364..6505 | Branchiostoma lanceolatum | exon |
| BlTCONS00113446-exon-Sc0000229-1564993656:6787..6894 | BlTCONS00113446-exon-Sc0000229-1564993656:6787..6894 | Branchiostoma lanceolatum | exon |
| BlTCONS00113446-exon-Sc0000229-1564993656:7189..7257 | BlTCONS00113446-exon-Sc0000229-1564993656:7189..7257 | Branchiostoma lanceolatum | exon |
| BlTCONS00113446-exon-Sc0000229-1564993656:7672..8511 | BlTCONS00113446-exon-Sc0000229-1564993656:7672..8511 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000229 | genome | Sc0000229:3205..8511 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055670 |
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