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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000228:387962..395596- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113435 ID=BlTCONS00113435|Name=BlTCONS00113435|organism=Branchiostoma lanceolatum|type=mRNA|length=7635bp|location=Sequence derived from alignment at Sc0000228:387962..395596- (Branchiostoma lanceolatum)
TACACTTCTGTACGTTTGGGACCGCATAGTGATGTCATCCCTTGTGATTG
TATATCTGTAAATAATTTGCGTTTGCATCTCATTAATATGTATAAGCAGC
AACACCTGTGCTGCATTGCTATGTGAACCAGTCAGAATTGCCTTGAAGAA
GGTGACAGAGGGTCACCGAAACGTCGGTTGAATAAATCCCTTGGTTGTGT
AAAAAGAGTCTTTTTATTCAGTGACTTACCAACCTGATGAAACTATTCAC
GGCTTCTAATAAGCTACCTTGTAAACCCCAGGGGAGCCTCCCAGCTGCCC
AAACCAGTTCTTAGTGACCTTACACAATTACAGTAATTGACACGTGATAT
GGCACCAATATGGCTGCTACACGGACCTATCATATGTTGTTTACCTATTT
TCTAGATGAATATGTATGCCAGCTGATACACAATTACTTATGCCTTAACT
ATATGGTTGCTCCGGGGGCAAGGATTTTGCAGGCGGACTAATAGGATCTT
TCTGAATGGACAATGCAACAGGTGCTTGGGCTGTTTGTAAGGGGAGACGG
TGTTGTTGTTCTCTCCCTGACCTTCGAGGGGTCGTGCACTACAACAGTGC
TAAGGAAGCCTGGTGGCATAATGCTGTAATCTTCTGTATGCTGCTGCATT
CTGTTTACATGGTGCTTAAGTCATGAAAGGACACCACCGTGGCATCAGGT
ATGTTCTCATAAAAAGTAGAGGTACAATGGTCTGTGTTTCCAGGCATTCA
TAGTAATAAGAGCGGCAAGGACTACTCAAAGGCCTTTGTGGATTTCTGGC
ACAAAGGAGAGATGGCTGCCAACGATCAAAAATTGGCATGGAAAGAGTTG
ACGTCGCAATTGGATTCTCGCAACGAGACTAATAAGATTTGTGGGAAATG
CAGCAAGGAAAACGACGAGGAGGACAGTTTTATACAATGCGGGGGGTGCA
AGACGTGGTTTCACTCTCACTGTAGCGGGCTCCTAGAGCACCTGTTGGAT
GACCTGGTCGACTGTGGGGAGAAGGATTACATCTGCTACACCTGCTTACA
GCTGCGGAACAAGTGCAAACGGCAGAAGACTGACGGGTCGAAGAAACAAC
CTGCGAAAGCAACAAAGGACAAAACAAAGCCGCACAAAGATCACAATGAC
CTAGTGAACGGGACAGCCAAAAAAGGAAAGGAAACTGCAAACCAGAGTAG
AGACAAATCAGAAAGCATAGCACAAAGTGCCTCAGAAAAATGCAAGAGTG
ATAAGCCTGTTGGACAAAGGCAGGGGGTTTACAATGAACCTGAAGTAACA
AGCACAGCATTCATAAGAGCACTGACAGGCAGAGTGGTCTCTTTAGAAGC
TGCTAACACAAGACTGAATGCAAGGGTGGTCCGTCTTGAACTCCAACTGT
CAAACATGAAAATGTGCCAAGCCCCAAATCCTGTGGAAAATGTCGGAACA
GATTCCTGCTACACCAATCCCAGGCGTGCTTCTCCCTCCGGTTTCGAAAC
AGAAACCGTGCAAAGCGAGTGTGCAATACCGACAGAGTACATGTTTCGTG
ACAAATCTCTCAGTCACCCTGTGCCAGACTCACATATTACTGTAAATGCT
GGGATTGTTGAAAATGAGGAACGAGGCAACAACGACCACCTGTGTACGAA
GCAAGCACGGTCAGTGTACAGCCCTGATGATGAAGACGAAGCAGAAATTT
TACTTATCGGGGATGAGAACATAAAGGGGATTCTACCTCAGATGCTGCAC
AAGGACCTCAAGCTGGCAAAACATTCTGCATTGATGATACAAGATGCAGC
TCTCTGTCTGAAAAACACGCACTACAGCCGGCTAAAATGCATCATTCTCC
ATGTGGGAATGAATGACATCAAGACTACAAACAGCGCAGACGATGTCGTT
CAAAGCTACAACTCCTTGATATCAAAGGCACAGAAAAAGTATGTATCCCC
TCGTATAGTTCTGTCGCTCATTCCGCCGTGGAAGGAGATATCTCAGATGT
ACAAGCGCCAGCAAGTCAATAATTTTCTGTGGGACATCAGCTCCACTATG
GAGAAAGCCTTGTGTGTTGATAACGAGAACTTGGGTAAAGAGCGACCCAT
TCTGATTAAAGCCGGGCTGTATCAGGCTAATGGAATTCTCCTCAATGCTG
ATGGTACAGCCTTACTTGCCTCCAACTTAAAGAAAGCTGTCGATGTTGCC
ATAGACGACAGGGGAACCCCGCAAATAGTATTGCATGGCAACGATGTGGA
ATCTGACATTAAACTGCAACCTGGGACCCCTGCTAGCAGAGAGAGTACTA
CAACTTCTCAGGGCGATATCCAACAACATATGTCACCTAGACCTGGCAAC
AAACTCTCTCCAGGATTTGTGAGTTACCCAAACGTTGTGGAAAGACCCTA
TCAATGGGGGCATGCAGGTCCATTAAATGTGGTGAACACAGGGCCACAAA
CAAGCTCGGAACACAATCTGCAGCATCCAACATATATGATGTGCACGCAG
GCACACCCCTATCCACCACTCCAAGCTAGCCCCATACAGGCAATCACTAT
AACCCACACAGCACCTGTGCAACACATACCAGCAGGACAGCCTGTGCCCA
TGAGACAGCCCTCTCCACATATGCCAATGCAAGCCTTACCCATCCAGCCA
GCCGCACTCACCCAGGCTGTGCAGCAGCAACCCATACCCATGAGGCAACC
CACGCCCAATCAATCCATGCCTCAACCCACGTTTATACATGTACAGCCCC
CCCTGCATGGCAGACCCATGTATGGAACACTTAGACGGCAGTCCAAACCC
GTGAAGTCTATGCCCATGATGACTGCATCCATACAGCATGTATCCATGGG
GCAGGCTATACCCATGCAGCAACCTCCACCCATGCAGTCCAAGGGACAGC
CAATACCCATACAACAGCATACACCCATGCAACAGCATACACCACTGGCC
ATGGGACAGCCTTTCCAAATGAGACACCCTCCACCCATGGGGCAGTCTAC
ACCCATGCAACAGCCTTTACAAATGAGACACCCTACACCCACGGGGCAGT
CTACACCCATGGGGCAGCCTATACCCCTGGGACAGCCTATACCGCTGGGA
CAGCCTTTACAATTGAGACACCCTACACCCATGGCACAGTCTACACCCAT
GGGACAGCCTATGATGGGACAGCCTTTACAATTGAGACACCCTACACCCA
TACCACAACCTCCACCAATAAGACAAGCTATACATTTTGGACAGCCTCTA
TCCTTGAAGCCTGCAGGACAGGCTAAAACCCCAGAACGAGTAATGACAGG
GATGCACCCTAAATGAGCTTCATCTACCTAAATTCAGGTCTGAATTTTGA
GGCTAGACTTCAGTATAAGATGCTGAGAAAATTCACTTGTTAAATTATCC
AAATGTGTTTATTGAATTTTAGCAGAAAATAAGTAAATATTATTGAATAT
AGATTGTTTGAAATGGTAGATGTTTAGTCTAATGAACCTCAACCAAGTCA
CAGAACAAATTATTGGTGGGAGAAAATTGTTGTTACCTAAATACACAATT
TTTTCCAGTAACAAAGTGTCTTGCCTGTGAAAGTGTAATAGCAGAAATGC
AGCTTATACATGTATCACTTATTGTGCAGTACAGAGCTTATTTCAATGCA
TGGAGTAATTTGTCTAGTACATTTTTTGTACTTTTTAGAGGATTTCTACA
AACATTTTCTAACATTTCCTTATCTATATCTTAACACTTAAAGGATGATC
TGTTATGTGCAACTACACAAACTTGTGATTGTTAAGTATTAAAAGTTTGT
AATTTTTAATTTAGTATTCTTTGATGCAATTATGACATTCAAATTGTGAA
CAATGCCCTCAAGATATATTTCATGCTGCTGCTACTGAAATGTCCTGTAT
TTGATATGATACATCTACATATATGTATAGCATTATTTAAAAGGTTCAAT
ATTCAAGGTTAAATATTTCTTCATGTTTTGTTGTGCTACTATATTGTATA
AGTTAAAAGAATGTTCCAATCTAGTAACTCCCTGTTCTTGGGCGTGGTCC
AATGCCAAACGCACTAAGCGAACAAAGACTGCAAGAAAATTAAAGTATAC
AATGTATAATCTCTTAAAGATAATGCAGACATGTTATATTTGGTGTAACA
ACTTGCTATTGTGGAACCATTTGACTGCAGCTTGTTATTGCATTAAACAT
CAGTTACTTGTGTGATTCTCCGAATATCTTCTCAAATTCCNCAATTGGAT
TCTCGCAACGAGACTAATAAGATTTGTGGGAAATGCAGCAAGGAAAACGA
CGAGGAGGACAGTTTTATACAATGCGGGGGGTGCAAGACGTGGTTTCACT
CTCACTGTAGCGGGCTCCTAGAGCACCTGTTGGATGACCTGGTCGACTGT
GGGGAGAAGGATTACATCTGCTACACCTGCTTACAGCTGCGGAACAAGTG
CAAACGGCAGAAGACTGACGGGTCGAAGAAACAACCTGCGAAAGCAACAA
AGGACAAAACAAAGCCGCACAAAGATCACAATGACCTAGTGAACGGGACA
GCCAAAAAAGGAAAGGAAACTGCAAACCAGAGTAGAGACAAATCAGAAAG
CATAGCACAAAGTGCCTCAGAAAAATGCAAGAGTGATAAGCCTGTTGGAC
AAAGGCAGGGGGTTTACAATGAACCTGAAGTAACAAGCACAGCATTCATA
AGAGCACTGACAGACAGAGTGGTCTCTTTAGAAGCTGCTAACACACGACT
GAATGCAAGGGTGGCCCGTCTTGAACTCCAACTGTCAAACATGAAAATGT
GCCAAGCCCCAAATCCTGTGGAAAATGTCGGAACAGATTCCTGCTACACC
AATCCCAGGCGTGCTTCTCCCTCCGGTTTCGAAACAGAAACCGTGCAAAG
CGAGTGTGCAATACCGACAGAGTACATGTTTCGTGACAAATCTCTCAGTC
ACCCTGTGCCAGACTCACATATTACTGTAAATGCTGGGATTGTTGAAAAT
GAGGAACGGGGCAACAACGACCACCTGTGTACGAAGCAAGCACGGTCAGT
GTACAGCCCTGATGATGAAGACGAAGCAGAAATTTTACTTATCGGGGATG
AGAACATAAAGGGGATTCTACCTCAGATGCTGCACAAGGACCTCAAGCTG
GCAAAACATTCTGCATTGATGATACAAGATGCAGCTCTCTGTCTGAAAAA
CACGCACTACAGCCGGCTAAAATGCATCATTCTCCATGTGGGAATGAATG
ACATCAAGACTACAAACAGCGCAGACGATGTCGTTCAAAGCTACAACTCC
TTGATATCAAAGGCACAGAAAAAGTATCTATCCGCTCGTATAGTTCTGTC
GCTCATTCCGCCGTGGAAGGAGATATCTCAGATGTACAAGCGCCAGCAAG
TCAATAATTTTCTGTGGGACATCAGCTCCACTATGGAGAAAGCCTTGTGT
GTTGATAACGAGAACTTGGGTAAAGAGCGACCCATTCTGATTAAAGCCGG
GCTGTATCAGGCTAATGGAATTCTCCTCAATGCTGATGGTACAGCCTTAC
TTGCCTCCAACTTAAAGAAAGCTGTCGATGTTGCCATAGACGACAGGGGA
ACCCCGCAAATAGTATTGCATGGCAACGATGCGGAATCTGACATTAAACT
GCAACCTGGGACCCCTGCTAGCAGAGAGAGTACAACAACTTCTCAGGGCG
ATATCCAACCACATATGTCACCAGAGGTGCAAGCGATACCTAGACCTGGC
AACGAACTCTCTCCAGGATTTGTGAGTTACCCAAACGTTGTGGAAAGATC
CTATCAATGGGGACATGCAGGTCCTTTAAATGTGGTGAACACAGGGCCAC
AAACAAGTTCGGAACACAATCTACAGCATCCAACATATATGATGTGCACG
CAGGCACACCACTATCCACCACTCCAAGCTAGCCCCATACAGGCAATCAC
TATAACCCACACAGCACCTGTGCAACACATACCAGCAGGACAGCCTGTGC
CCATGAGACAGCCCTCTCCACATATGCCAATGCAAGCCTTACCCATCCAG
CCAGCCGCACTCACCCAGGCTGTGCAGCAGCAACCCATACCCATGAGGCA
ACCCACGCCCAATCAATCCATGCCTCAACCCACGTTTATACATGTACAGC
CCCCCCTGCATGGCAGACCCATGTATGGAACACTTAGACGGCAGTCCAAA
CCCGTGAAGTCTATGCCCATGATGACTGCATCCATACAGCATGTATCCAT
GGGGCAGGCTATACCCATGCAGCAACCTCCACCCATGCAGTCCAAGGGAC
AGCCAATACCCATACAACAGCATACACCCATGCAACAGCCTCCACCACTG
GCCATGGGACAGCCTTTCCAAATGAGACACCCTCCACCCATGGGGCAGTC
TACACCCATGGAACAGCCTCCACCACTGGGACAGCCTTTACAAATGAGAC
ACCCTACACCCACGGGGCAGTCTACACCCATGGGGCAGCCTATACCCCTG
GGACAGCCTATACCGCTGGGACAGCCTTTACAATTGAGACACCCTACACC
CATGGCACAGTCTACACCCATGGGACAGCCTATGATGGGACAGCCTTTAC
AATTGAGACACCCTACACCCATACCACAACCTCCACCAATAAGACAAGCT
ATACATTTTGGACAGCCTCTATCCTTGAAGCCTGCAGGACAGGCTAAAAC
CCCAGAACGAGTAATGACAGGGATGCACCCTAAATGAGCTTCATCTACCT
AAATTCAGGTCTGAATTTTGAGGCTAGACTTCAGTATAAGATGCTGAGAA
AATTCACTTGTTAAATCATCCAAATGTGTTTATTGAATTTTAGCAGAAAA
TAAGTAAATATTATTGAATATAGATTGTTTGAAATGGTAGATGTTTAGTC
TAATGAACCTCAACCAAGTCACAGAACAAATTATTGGTGGGAGAAAATTG
TTGTTACCTAAATACACAATTTTTTCCAGTAACAAAGTGTCTTGCCTGTG
AAAGTGTAATAGCAGAAATGCAGCTTATACATGTATCACTTATTGTGCAG
TACAGAGCTTATTTCAATGCATGGAGTAATTTGTCTAGTACATTTTTTGT
ACTTTTTAGAGGATTTCTACAAACATTTTCTAACATTTCCTTATCTATAT
CTTAACACTTAAAGGATGATCTGTTATGTGCAACTACACAAACTTGTGAT
TGTTAAGTATTAAAAGTTTGTAATTTTTAATTTAGTATTCTTTGATGCAA
TTATGACATTCAAATTGTGAACAATGCCCTCAAGATATATTTCATGCTGC
TGCTACTGAAATGTCCTGTATTTGATATGATACATCTACATATATGTATA
GCATTACTTAAAAGGTTCAATATTCAAGGTTCAATATTTCTTCATGTTTT
GTTGTGCTACTATATTGTATAAGTTAAAAGAATGTTCCAATCTAGTAACT
CCCTGTTCTTGGGCGTGGTCCAATGCCAAACGCACTAAGCGAACAAAGAC
TGCAAGAAAATTAAAGTATACAATGTATAATCTCTTAAAGATAATGCAGA
CATGTTATATTTGGTGTAACAACTTGCTATTGTGGAACCATTTGACTGCA
GCTTGTTATTGCATTAAACATCAGTTACTTGTGTG Coding sequence (CDS) from alignment at Sc0000228:387962..395596- >BlTCONS00113435 ID=BlTCONS00113435|Name=BlTCONS00113435|organism=Branchiostoma lanceolatum|type=CDS|length=2541bp|location=Sequence derived from alignment at Sc0000228:387962..395596- (Branchiostoma lanceolatum)
ATGGCTGCCAACGATCAAAAATTGGCATGGAAAGAGTTGACGTCGCAATT
GGATTCTCGCAACGAGACTAATAAGATTTGTGGGAAATGCAGCAAGGAAA
ACGACGAGGAGGACAGTTTTATACAATGCGGGGGGTGCAAGACGTGGTTT
CACTCTCACTGTAGCGGGCTCCTAGAGCACCTGTTGGATGACCTGGTCGA
CTGTGGGGAGAAGGATTACATCTGCTACACCTGCTTACAGCTGCGGAACA
AGTGCAAACGGCAGAAGACTGACGGGTCGAAGAAACAACCTGCGAAAGCA
ACAAAGGACAAAACAAAGCCGCACAAAGATCACAATGACCTAGTGAACGG
GACAGCCAAAAAAGGAAAGGAAACTGCAAACCAGAGTAGAGACAAATCAG
AAAGCATAGCACAAAGTGCCTCAGAAAAATGCAAGAGTGATAAGCCTGTT
GGACAAAGGCAGGGGGTTTACAATGAACCTGAAGTAACAAGCACAGCATT
CATAAGAGCACTGACAGGCAGAGTGGTCTCTTTAGAAGCTGCTAACACAA
GACTGAATGCAAGGGTGGTCCGTCTTGAACTCCAACTGTCAAACATGAAA
ATGTGCCAAGCCCCAAATCCTGTGGAAAATGTCGGAACAGATTCCTGCTA
CACCAATCCCAGGCGTGCTTCTCCCTCCGGTTTCGAAACAGAAACCGTGC
AAAGCGAGTGTGCAATACCGACAGAGTACATGTTTCGTGACAAATCTCTC
AGTCACCCTGTGCCAGACTCACATATTACTGTAAATGCTGGGATTGTTGA
AAATGAGGAACGAGGCAACAACGACCACCTGTGTACGAAGCAAGCACGGT
CAGTGTACAGCCCTGATGATGAAGACGAAGCAGAAATTTTACTTATCGGG
GATGAGAACATAAAGGGGATTCTACCTCAGATGCTGCACAAGGACCTCAA
GCTGGCAAAACATTCTGCATTGATGATACAAGATGCAGCTCTCTGTCTGA
AAAACACGCACTACAGCCGGCTAAAATGCATCATTCTCCATGTGGGAATG
AATGACATCAAGACTACAAACAGCGCAGACGATGTCGTTCAAAGCTACAA
CTCCTTGATATCAAAGGCACAGAAAAAGTATGTATCCCCTCGTATAGTTC
TGTCGCTCATTCCGCCGTGGAAGGAGATATCTCAGATGTACAAGCGCCAG
CAAGTCAATAATTTTCTGTGGGACATCAGCTCCACTATGGAGAAAGCCTT
GTGTGTTGATAACGAGAACTTGGGTAAAGAGCGACCCATTCTGATTAAAG
CCGGGCTGTATCAGGCTAATGGAATTCTCCTCAATGCTGATGGTACAGCC
TTACTTGCCTCCAACTTAAAGAAAGCTGTCGATGTTGCCATAGACGACAG
GGGAACCCCGCAAATAGTATTGCATGGCAACGATGTGGAATCTGACATTA
AACTGCAACCTGGGACCCCTGCTAGCAGAGAGAGTACTACAACTTCTCAG
GGCGATATCCAACAACATATGTCACCAGAGGTGCAAGCGATACCTAGACC
TGGCAACGAACTCTCTCCAGGATTTGTGAGTTACCCAAACGTTGTGGAAA
GATCCTATCAATGGGGACATGCAGGTCCTTTAAATGTGGTGAACACAGGG
CCACAAACAAGTTCGGAACACAATCTACAGCATCCAACATATATGATGTG
CACGCAGGCACACCACTATCCACCACTCCAAGCTAGCCCCATACAGGCAA
TCACTATAACCCACACAGCACCTGTGCAACACATACCAGCAGGACAGCCT
GTGCCCATGAGACAGCCCTCTCCACATATGCCAATGCAAGCCTTACCCAT
CCAGCCAGCCGCACTCACCCAGGCTGTGCAGCAGCAACCCATACCCATGA
GGCAACCCACGCCCAATCAATCCATGCCTCAACCCACGTTTATACATGTA
CAGCCCCCCCTGCATGGCAGACCCATGTATGGAACACTTAGACGGCAGTC
CAAACCCGTGAAGTCTATGCCCATGATGACTGCATCCATACAGCATGTAT
CCATGGGGCAGGCTATACCCATGCAGCAACCTCCACCCATGCAGTCCAAG
GGACAGCCAATACCCATACAACAGCATACACCCATGCAACAGCCTCCACC
ACTGGCCATGGGACAGCCTTTCCAAATGAGACACCCTCCACCCATGGGGC
AGTCTACACCCATGGAACAGCCTCCACCACTGGGACAGCCTTTACAAATG
AGACACCCTACACCCACGGGGCAGTCTACACCCATGGGGCAGCCTATACC
CCTGGGACAGCCTATACCGCTGGGACAGCCTTTACAATTGAGACACCCTA
CACCCATGGCACAGTCTACACCCATGGGACAGCCTATGATGGGACAGCCT
TTACAATTGAGACACCCTACACCCATACCACAACCTCCACCAATAAGACA
AGCTATACATTTTGGACAGCCTCTATCCTTGAAGCCTGCAGGACAGGCTA
AAACCCCAGAACGAGTAATGACAGGGATGCACCCTAAATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113435-exon-Sc0000228-1564993656:393270..395596 | BlTCONS00113435-exon-Sc0000228-1564993656:393270..395596 | Branchiostoma lanceolatum | exon |
| BlTCONS00113435-exon-Sc0000228-1564993656:387962..389884 | BlTCONS00113435-exon-Sc0000228-1564993656:387962..389884 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000228 | genome | Sc0000228:387962..395596 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055665 |
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