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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000228:218610..222812- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113425 ID=BlTCONS00113425|Name=BlTCONS00113425|organism=Branchiostoma lanceolatum|type=mRNA|length=4203bp|location=Sequence derived from alignment at Sc0000228:218610..222812- (Branchiostoma lanceolatum)
ATCAAATTCACCTGAAGACAATTTTCTCTTGGAAGAAAGAGATCAATAAT
TGCACAGAACAAAAATCAAATTCACCTGAAGACAATTTTCTCTTGGAAGA
AAGAGATCAATAATTGCACATGCTTGTACTAAAGTAGTCGTTATTTCCTC
CGTGTATGTTCCCAAAAGCGACGTACTGATCAGGAATACTGTTTGTCAAC
TGACCAAGGTGGTCAAACTTTACATTGTTATCTACCACAGCCCCTGCCAA
TTCCCCTAATCGCAAAAGTGGTATAGTCCTGTTGACCTTTGTACTCTGCA
AGGCCATCTTGGTGCAAGGTTTCTGCGCTCCAAGTCCCACAAAAGAGAAG
GATTTTCCAGGTATGTGAGGGCTTTCTATGACCCTGAAATTTCGCTTCAG
TTAGGTTAGATATAGATCTAAATGTAGTAACTACTATAGCATGTTCGTGT
GCAAAAATAACCGAACTGAGAGCTTACATGTAGCGCGCACACAGAGAAAT
CTGTTAATTTGCATACAGCTGTTTACATTTGAGCCGTTTCCAGCTGTGCG
TTCTTTTCATTAATTAAAGCGTTTTAGTGTAGACAATATATCGAATATAC
ACGCATGCTATTGCATTTTAGATTATTTTTTTGTAGATAGAAGCCTCGTA
AATTGTGAAATTCCTCAGTTCATTGTTTGTTGCTTGTAGCTCTATTCAGC
CTAGAGGTCGTTGACCTGTCAATGACGTCACATCCTGGTGACTCACCTGC
GTCACAACTACAATAGTCACACCTGGGTCACGAGACTGTTTGTCCGTTCC
TTATTGGTACACATACGTAATGCCTTCCCCCAGGACAATGTTGTATAAGG
AGGCGGTGCTGCGCATTTTGGCTAGCAGTCCAGTCGTTCTAGTTTCCGCT
GACGAGTCGCCATTTTGATTTTTTTTCGTGTATCTTTTATTCAGATCTTA
ACCGCAAAACTGGGGAACGTAAACAAGCCACAAGAGAAGATGTCCAAGAA
GGGTAAGAATTTTAACTGTTGTATAAGATATCAAACTGCGTTTTGGCCAC
ATATCCGAGTGGATGTTGTTGTATAACGCTGATGTTTACTTGTGTCAAGG
AGGTTCATTATGTAACAATTTCTTGGTGTGATTCTTAACTGCAGACAACA
GTTAGACTCTTAAGATCTTAATTCAAGGAACATAGTTTTCTTTAAGTGTT
GTCTTACCTAAAAAATAATCCTTGAAAACACAGCACAAATCGTTGAACAT
TTTAACTGTAATACTACATTCATATATTATGTTCAGTGCAGTTTTCAAAG
GTGCATTCATGACCCATCAGTATATAAGAGAAAATGTTAATTTTTGGGTT
AGAGTTTGCGCCAATATCACCTACTAGTCTCTTACTACATTATACAGACA
ACACATTTTGATAGTTAAGTCAGACAAAGGGTTATAAGATGAACTCAACA
ACATATTGCTTTTGCTTACTACATGTAGCAGTTTGTATGGCATCACCCCG
CCCCATGTCATTATCATAGTGCTAGTGTATGGCAGTGTTAAAGTTTAACA
CCAGCTGATTGTATCAAAATATTACAGATATATGTACTAGTATGTAAGCC
TATGTTTTTTTAGTAGAATTTTAAGATTTATTTGCATTTCTAGTTTGTAC
CTTGTAGTTGACCGTATGAACATTGTTGAACAATTTCCTGTGTCAAGTCA
ACTGAGCTTTTGTTTTAAGGAGCATATTTCTGTTTCTTGCAGCGCCTTAC
CCACCCCAGCAGCCTTACCCCACCCAGAACCAGGCCGCCATGGCTGGACA
ACCCCCACAGGTACCGGGGGCACCACCACCATACATGGCTGTAAGTAACA
TTTTCTCTGTGGAACTTACTGTAGATTCCTTTGTTCTTGTGAGGACTTGA
TTCTGCAGTAAAATGCAAAAGTGTTTTAAGTTCACGGTTGAAGCAGTTCT
TTAGTTCAGTTGCAATACATAAGAAATGCATATTCACGGTGTCATGAATT
TGCGGTGGAGAGGTCACATGAAAAATAAAACTACCGCAAACATTTTAAGA
TTTACGGTATGTCTATATCCATGTCTGCAAACCTAATGTGTTATGCCGAA
GGGCCATACATTTTGGACCTTATAAATACAAATACAGACAGATATCTACC
AGTTGTAATGTCAGTATGAAGAAGAAATGCCATGTAAGACTGGCATATCC
TCAAGTACACATAAAAATCTTTCAACATGATGCACATGGCAAACAATACA
AAGACTGGATGACTAGAACTGCACATGTCTTGTGTTATGTTGATTTAGCA
CTGTTTCAAATTCATGTATCAAAATGACTCCCTCACTGGTAATATGTAAA
CATACAGATATATAACATGTATTCCAAAGCCTGTAGCAAAGTCATTAAAC
TTAAAGCTGGCTCATTTGTGATGCACACATACAAAGCCTTGACTTCAGTT
CAGTACCGGTAGTCACTTTTCCTCTTCACTTTTATCCACCAGCATCCGCA
GGCACAAGGACAAGCCCCCCCACCTTATTACACCTACCAGCAGCAGCCCA
CGCAGTTTGGAGGAGCGCCCCCTATGCAGCAGCAGTACGGCCAGCAGCCG
GTGCAGGTGGCCATGCAGGTCCCGTACTACGCGCCAGGGAGCACTGTTCA
CGCGCAGAATGCCTTCGACTCTGGAGCCAGATTCAGTGCAGGAGCCACAC
CAAATATTCCTGTAAGTTTTCACCAGTGCTTTTACTAGAAACAGTATCAA
TCTAACAAGTTGGTTTATGCTTCGGTCCCATATCCAAAACTGGGGCTCGG
TCGGGCTGTTTGCAAAAACGAAAGATAAAACATGCATATAAAGAAAATAC
ACAATATACTGTTAGGAGTAATTCTTTTACCTTTTGTATCTTTTGTTGTC
TTTTATATCATACTTTTCCTTCCCACAAACTATCCGGCCGGGCCCCGGAT
TGGAAATGGGACCGAAGCATTAGATTTAGATGTGCCTCTTGGGTTAAGAT
TTAACCCTCTAGAATGGCCACATGGCACCAAATGAATCTGTATTGGTTTT
GGCAGCAGGGAGAAGGAAACAGAGTAAACAACTCTAACAATCTACCTGTT
TGTATACTAGTAGTAGGAGCTTGGGCAGCGGACTAAAGCTAACAAGGCTG
GACTAGAGGCTAGTAAAAGCCTGAGAAAGTTTGAATGATGTTAACCCTAA
TAGTGACCTTAGTGGCCTTATAACATTTTATTTATTCATGGCTTATTGGC
ATACCTATAGTAGTATGTAAAGTTTCCCCGCACAATTCAGCATTTGGCTG
CAGCATGGGAGGAGCTGTACAAAAATTTAGAACTGCATAAACCATTATTC
TAATTATTTTGTGTGATTTCCACAGCCCCCGCCACCAGGAGTGATGCCGA
ACCAGGCACAGTTAGCGGCAGCACAGGGCGCCACGGTCGTCGCCACGCAG
CAGAAGCCCGACTTCTTCACCGGGGGGTCGGGAGGCGGATACAGTCTGTT
CTAAATCGACCCAGGGGAAGAGGTTTAGGAATGAAGGAAGTCGTGAAGAA
AAATGGTGCCATCTTGTATACTTGCACCATGTAAGGAGGCAGGGATGCAA
CAACACTCTATATAACAAGAACCCCATACATACTCTCTTTACACCTTGTA
TTTCAAGGGCAAAGACATTATCTGCACAATTTCTACCTGGGTACAGTAAT
TCCTTTGTGATATAAACTAGATAAGGTGGTATGGTTCAAACTTCCTGTAC
GACTTTGTTTGTGGGCATGTGTGCTATCTTTTATTTCAATACATTTGAAA
TTTAGTGCCAGTTTTGTCGTCTTATAATCAAATAATACTCCAGATGGAAT
TCTTTTTTGAGAGTTATGATAAAGGATGAAGAATTGATGATGAAAGATAG
AGTGAAAGAGGACTGGGAATTGGAGACGATTTTTCCGTATTTGTACATAA
TCGTAATAATATTAAATCTTAACCTTTGTGAAACTCTTTAAGATAGAGGT
GTATAAACTATGACGTTAGTGCCTTTTGGTACTTCATGTCTTTCTTCATC
AAATTGCATCCTGGAAGTGGAAGAATTTGTCCTTGTTACTGTTCTTAATT
TTTTTATTCCCATTCTTAGTATGATTCTTCGTAATTATACAGTAATTAGA
CTATAACAAAAATAATTTTGTTACTTCTAAGCCTGTCGTGGCTGTATACT
ATA Coding sequence (CDS) from alignment at Sc0000228:218610..222812- >BlTCONS00113425 ID=BlTCONS00113425|Name=BlTCONS00113425|organism=Branchiostoma lanceolatum|type=CDS|length=459bp|location=Sequence derived from alignment at Sc0000228:218610..222812- (Branchiostoma lanceolatum)
ATGTCCAAGAAGGCGCCTTACCCACCCCAGCAGCCTTACCCCACCCAGAA
CCAGGCCGCCATGGCTGGACAACCCCCACAGGTACCGGGGGCACCACCAC
CATACATGGCTCATCCGCAGGCACAAGGACAAGCCCCCCCACCTTATTAC
ACCTACCAGCAGCAGCCCACGCAGTTTGGAGGAGCGCCCCCTATGCAGCA
GCAGTACGGCCAGCAGCCGGTGCAGGTGGCCATGCAGGTCCCGTACTACG
CGCCAGGGAGCACTGTTCACGCGCAGAATGCCTTCGACTCTGGAGCCAGA
TTCAGTGCAGGAGCCACACCAAATATTCCTCCCCCGCCACCAGGAGTGAT
GCCGAACCAGGCACAGTTAGCGGCAGCACAGGGCGCCACGGTCGTCGCCA
CGCAGCAGAAGCCCGACTTCTTCACCGGGGGGTCGGGAGGCGGATACAGT
CTGTTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113425-exon-Sc0000228-1564993656:222453..222812 | BlTCONS00113425-exon-Sc0000228-1564993656:222453..222812 | Branchiostoma lanceolatum | exon |
| BlTCONS00113425-exon-Sc0000228-1564993656:221811..221868 | BlTCONS00113425-exon-Sc0000228-1564993656:221811..221868 | Branchiostoma lanceolatum | exon |
| BlTCONS00113425-exon-Sc0000228-1564993656:220973..221070 | BlTCONS00113425-exon-Sc0000228-1564993656:220973..221070 | Branchiostoma lanceolatum | exon |
| BlTCONS00113425-exon-Sc0000228-1564993656:220102..220320 | BlTCONS00113425-exon-Sc0000228-1564993656:220102..220320 | Branchiostoma lanceolatum | exon |
| BlTCONS00113425-exon-Sc0000228-1564993656:218610..219437 | BlTCONS00113425-exon-Sc0000228-1564993656:218610..219437 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000228 | genome | Sc0000228:218610..222812 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055659 |
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