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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000228:439024..442571+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113389 ID=BlTCONS00113389|Name=BlTCONS00113389|organism=Branchiostoma lanceolatum|type=mRNA|length=3548bp|location=Sequence derived from alignment at Sc0000228:439024..442571+ (Branchiostoma lanceolatum)
GCAAGAATGGAGGACGATGAGGAACACGTGTATGAGGATGTGGACGGTGT
GAACGCAAAGCGACCTCGGAGGAACCTGTACGAAAATGATGGTGTGAACG
TCCCGAGGGACATACAGCTACCTCCGGGGTACGCGTACGAAAATGCCGAG
GATGTGAACGTCCCGAGGGACACAAATCGTCCTCCGAAGCACGCGTACGA
CAATCCCCACGATGTGAACGTGCCGAGGGACACAAAGCGACCCCCGAGGC
ACGAGAACGATGAGGTGGCCCGTGACCCGACTGGGTTACCTCGGTCTGTG
CCTGAGGGATATCTGCGTCACCTCCTCCACACGGCAGACGTGGTGTGGGC
GGGGTTCACCGGCCCAGGGGAGCAGTACACCGACACGTCCTACACAGCAA
ACGATGCTAAACAACGCGAGGAGCAAGAGGAACGGCGCTTTGGCTACAAA
GCTAGAGGTACGTCCAGTTACTACAGGGTTAATGACCCGCTTCCCTTTGG
TGTATACGGTGTAATAAGGCATGGTTGGTTCCTATAACCACCAAAATGAC
CGGCCGATTCGGCGAAGCGAGCGAGGTGATTTACAATATTGTAATAGGAA
CAGAATATGCCTTATGACACAGTATACACCAAGGGAAGCAAGTCATTAGC
AAAATTATAATTTAGCGACTATCGTATATCAAAGTGAAAAATGAGTGAAA
AAGCCCTGTATAACATATAACTCTTTTAATCTTACACACATTGAAGATTG
ACCGCCATATTGGATTATGCGGATTTATGGCGGAAAAATCTATACGTGGT
CAATATGGAGAAACAATGATGGTGGTTATGGCAAAGTGGAGCCTTGTCAT
TGGTCCACGTCATTTGGCTATATGGTAATAGTATTTCAAACATATCTTAC
CTTTAGAGCTACATGTATGCATCGCTATTATGTTGAAAAAGATATTGCCG
TTTGTTATATGTCTTATATGTACTCATGCACGATATTCAACGAACGTTTG
AAATGCGTTATAGTGAAAATGTCAACATGGATTTATAAGATTAGACATAA
CGTCTACGTACGTACGAGCGCAACAAAAGGGCGTCTGAAATGTATATGGT
TTACGCAATACCTACCGACCAATGGATGCTGATAGCAAATAACATACAAT
GAACATAATGAATATTCATAATCGCACGTGTAAATACGTGTATTGCAATT
CTTTGTGAACACAGCAAAATGCGGTTGGTTGACTGAAACAGAAATGTCAT
TCTTTCAATAACAGTGGGTTCAAAGTACAAAGCATCTTTGAAAATTTTTA
TTGCATTCCTCTGTCGTCATATGACGTTAGAAGTCATACAGTCATTCCTC
TAAATTCAAACATGCGGTTTTCCAAGTCTGATATTATTGCTTTGTTGGTA
GTTTGACATTTAAGAGAGAAGTTGTAAAGCCAGATTATTTGGGGCCATTT
AAAAAATGAAAGAGTTGTTGGCTGTTCTTGTAATTCATTGTCGATTGTCC
AAGAAGAGAGATAGTACCACACGATTGGAACTTCTTAAGCAACGTGTAAA
TGCTGTGTCTTAAGCCCCTGTCACACATTCGGAACCTTCTCACACACGAC
TTTACTCCCGACAACTCCCCAACCAAGGTCGGACCTGGGTTGGGAGTTAG
CCTGGAATCCTTCCTATTCAAGCTCCAATTCGCTCCTCTGGTCGCATCCA
AGCAGAATAAGACTTTCCCACTTTTTTTTCTTCAAAATATAACGTTATGA
TCGGCTGGCGCAGACAATTTTCAAGACTAGCAGCCTTGACGACCAACGAC
CAACCACAGACGACCTTGCTCACGACTTACTCCCAACCATGGTCTGTATC
TGTATCTGTATCTATATAGCCGGTATAACCGCCATTCGGCGTAACACACC
AGCTTCGCAGGCACGCGTCTGGAGAAGGTCGGGAGGCCTGATCGACTATG
TGTCACAGGAGCTTAATGTGTTTGCCTTATCTGTATACCTCAGAGCGAGC
CAGCGAAGTGTGGGGTTGGTGGAATTCTAAGAAATCCCATTGGATTGCGC
TGGGCTGTGGGCTCCTTGTCCTGGCGTCAGTTGTCACCGGTGCAGTCCTG
ACCACCAGCCTCGTAGCTGGAAGCAAAGTGGGCCAATCATTGGACGTCAA
AACCGAGGTATTGAAATCAGTTTGTTGTTTGTCTGTCTTGGTGTGCATCC
GCAGCTATATAAAAGATGGTGTAATAGGATACGTGGAGCATTGGAAGGAT
GGTTCGGCGAGGGTGCAATGTTGTTGTCTTTGAGAGCCAGGAAGTGATTA
TACGCGCAAGTGGAGCACGTTTTGGACTAGCCTGGCGAATCGCGCTCCTA
GTGGCCAGTCGGTCCTGTAACCCTCATCCCCTTGGGTGGGGGTCAGTAAC
CTCCAGCCGAGAGCTTGTGTAAGTACAGGCTAGTTTTGGACGACTCGTTG
CGTACGCACACAACAGTGTCAGGCCATACCCACGTATGCTTCGGTCCCAA
TTGGAAAAAGGGGCCCCGCAGGGTAGTTCACGGGCTGTTGTGTTGCACTT
TTGACTGTGACCCCTACGTGGCCCCGTGGGGCCCCCTGTGGCTGCCGAGC
TATTTTGGGGCAATGAAATAATGAAGTTAAATTATTTCAACCCGGCCTTA
AAATCAGCGCGGGACCCGGTAACAAATAGACGCCGTGAGGTAATCGTGCG
AGCACCGGGAGGTACCCCCCCCCCCCCCTCNGGTAACAAATAGACGCCGT
GAGGTAATCGTGCGAGCACCGGGAGGTCCCCCCCCCCCTCCTCGTACACG
GCAGTCCACCGGGACAAATTTGAGGCTTCGGGGCCCAGCTGGGACTACAC
CCCCGACGGGCACCGGCGCAATTCAGACCGTATACGTAGCATAAGAACTT
GTCACGTCGATGTTCAGCCTATTGGATCAGGATCTTGTCATTTTATATAT
TATGTTGTAGTGTAGTTGTGTTTAGGCTTGATGAAGTGTGGAAGGAGTTC
ATTCTGTAAAGAAAGTTTCAAGTCAAAATTAGTCTAGTAGGATTATGAAT
AACATTAGTATCAGGGTGGTTTGATAACAATGTAAAAGTCTGTTCACTCT
TTTGTATGCGTACATAGGCAGACATTATGCATCCTACCAGCAATCAAAAC
AGCGCGGAGACCGAAACAAGGACTACAACGCCAGGTCCTCCATGGTTGAC
GACATTCTACTCGTACATGGAAAACAGCTCCGACTTCGACAACTGGATTT
CGCCATCTGCACCAACGGGACCGAGCTCCACTGTGAACACCGAGATCTTG
CCAATAACCGTCACATCTTTGCCTACTACTACGGGTGAGCAACGTACATA
ATACAACCGCTGTATGACGTACACTTCATGTTTCTGTGTTTCTTCTTTTT
TTTAATTTCTAAAAGTACTCAATTTTGGTTGCTTGCTGTACTAGGCTGAA
TGAAGAATTTGTTCTATGAAAAAATGTAGTATTTATTTCAATTCCACACA
GAGCTAAACGAGTGCGCCAGTGAACCATGTCAGTATGGACAATGTGTG Coding sequence (CDS) from alignment at Sc0000228:439024..442571+ >BlTCONS00113389 ID=BlTCONS00113389|Name=BlTCONS00113389|organism=Branchiostoma lanceolatum|type=CDS|length=885bp|location=Sequence derived from alignment at Sc0000228:439024..442571+ (Branchiostoma lanceolatum)
GCAAGAATGGAGGACGATGAGGAACACGTGTATGAGGATGTGGACGGTGT
GAACGCAAAGCGACCTCGGAGGAACCTGTACGAAAATGATGGTGTGAACG
TCCCGAGGGACATACAGCTACCTCCGGGGTACGCGTACGAAAATGCCGAG
GATGTGAACGTCCCGAGGGACACAAATCGTCCTCCGAAGCACGCGTACGA
CAATCCCCACGATGTGAACGTGCCGAGGGACACAAAGCGACCCCCGAGGC
ACGAGAACGATGAGGTGGCCCGTGACCCGACTGGGTTACCTCGGTCTGTG
CCTGAGGGATATCTGCGTCACCTCCTCCACACGGCAGACGTGGTGTGGGC
GGGGTTCACCGGCCCAGGGGAGCAGTACACCGACACGTCCTACACAGCAA
ACGATGCTAAACAACGCGAGGAGCAAGAGGAACGGCGCTTTGGCTACAAA
GCTAGAGAGCGAGCCAGCGAAGTGTGGGGTTGGTGGAATTCTAAGAAATC
CCATTGGATTGCGCTGGGCTGTGGGCTCCTTGTCCTGGCGTCAGTTGTCA
CCGGTGCAGTCCTGACCACCAGCCTCGTAGCTGGAAGCAAAGTGGGCCAA
TCATTGGACGTCAAAACCGAGGCAGACATTATGCATCCTACCAGCAATCA
AAACAGCGCGGAGACCGAAACAAGGACTACAACGCCAGGTCCTCCATGGT
TGACGACATTCTACTCGTACATGGAAAACAGCTCCGACTTCGACAACTGG
ATTTCGCCATCTGCACCAACGGGACCGAGCTCCACTGTGAACACCGAGAT
CTTGCCAATAACCGTCACATCTTTGCCTACTACTACGGAGCTAAACGAGT
GCGCCAGTGAACCATGTCAGTATGGACAATGTGTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113389-exon-Sc0000228-1564993656:439024..439480 | BlTCONS00113389-exon-Sc0000228-1564993656:439024..439480 | Branchiostoma lanceolatum | exon |
| BlTCONS00113389-exon-Sc0000228-1564993656:441017..441180 | BlTCONS00113389-exon-Sc0000228-1564993656:441017..441180 | Branchiostoma lanceolatum | exon |
| BlTCONS00113389-exon-Sc0000228-1564993656:442141..442357 | BlTCONS00113389-exon-Sc0000228-1564993656:442141..442357 | Branchiostoma lanceolatum | exon |
| BlTCONS00113389-exon-Sc0000228-1564993656:442525..442571 | BlTCONS00113389-exon-Sc0000228-1564993656:442525..442571 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000228 | genome | Sc0000228:439024..442571 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055640 |
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