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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000228:431859..436810+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113387 ID=BlTCONS00113387|Name=BlTCONS00113387|organism=Branchiostoma lanceolatum|type=mRNA|length=4952bp|location=Sequence derived from alignment at Sc0000228:431859..436810+ (Branchiostoma lanceolatum)
CGTGTCTGCGGTCGAGGTATACGTAAGTACCCACTTTGCCTTCTTTGTTG
AGTTCTACAGTGCAGGGGAGATATCGTCTCATTACTCAATTTTTCTGTAA
CCTTTCTGTAACTTTACTGGGTCCTCCACGTGTCCACGATTTTCTATCAC
TCAAGTTGAGGTACCTAACACGGCCCGGTTTAACGTTTAGAAATACTAAC
TAAACAGGCTAGCTATCATAGAACGTATTTACCTCCAAGACTGAGTAGTC
ATAAACTCCGAATATTTACATATAAAAGGTTATCATCTCAAACTGACGGG
AAATCTAGAAATTTTGGCAATCAGTTTCAATGGGATTATATCTTTAATGT
CAGCCATTACAGATTTGACTTTTTGGTTATTAGGCTAGCATGACGACAAA
TCGCAGGTTTGTGTGTGCGTGCGTATACATGTGCGTACCTTCGTATGTAT
ATTATGTGTGTGTGTGTGGTACCTTCGTATGTATGTATGTATGTACATAT
ATATATGTGTGTGTGTATGTATGTATGTGTGTGTGTATGCGTGTGTATGT
GTGTGTATCTTTATGTGTGTATGTTTGCGTGCTTTACTTTCGAGAATGGG
TTACATAAAAAGGCACAAAAATATCAAAATTAAAACGCATCCTTTAAGAC
TAATATCATTTTCATTTCAACTGTTACGACATTTTAAGAGAAATGACTCT
CTGAATGACTAGAAAAGACAATTGCAAGAAAATGGCAAACAAGTGAGTCA
CTGTACGGCCCGTTGTGTGTAGTATTTGCACATAATCTTGCCTTCCTGCC
TTCACACAGGTAATTACCACGCTATGAATGTGCTGTTTGTATAAGAAATT
GCCCCAGGTAGAATTAATCAACGTGCCACTGACCCCTAGGTCAAACTGCT
GAAAAGGAATACAGATTCTCCATTGGGGTGGAACATCCTTACTGAGCCAG
CTTTTAAAGCCCACTAAATTACTCTCCAAGCAGAGGTTGTTGGGGAAAAT
TGTGATATTCTTATCATTATCGTAGAGCAAAAACGGGGCATATGGCAAGA
AGGTCACAATTTTACCCAGCAACCTCTGCCTCGAAAGCACACTAAATCAT
CTTTACAATATCATATATGCAATACCCTTACCGAAATCACCCTTTGGTTT
CCTCCACAGACGAAAATGGAATAGTCCGTAATTATTTTGTCACAGATAAT
ATTTAGCCTTTACTGTAAAAAATGGAAACTATCAATAAACTTAAACAAAA
CTAAAATAATGATATTTAATAAAAGAGGGCACTTGCTCTCAAACTTTAAA
TTCCAACTGTTTAACCAAAACATAGATATTGTATCGTCGTATAGTTATCT
AGGAGTGATGTTTACAACTGGCTGTACTTTCAGCACCGCTATGAAAACCC
TGCAAAAGAAGGCTTTACGAGCCCTCTTCAGTATAAAATCGACTCTTGGA
GACAGCAATCCCCCTATATCAGTGTACAGTAAACTATTTGATGCATGCGT
AGTTCCAATATTAACTTATGGTGCGGAGGTATGGGGCAAGATTGGGCTGA
ACGATAATCCTCCGATTGAACAAGTTCATCTCAAATTCTGTAAGGCAACC
CTGGGCGTAAGAAAAAATGCCAGCAACCTTGCCACAAGAGCTGAGCTCGG
TAGATATCCCCTCTGGATTGAAGTATATACTAGAATCTATTCATACTATA
AAAGATTAGTTAGAGAAATGCCGAAAGATAGCTTACAGTATGAAGCATTT
TTAGTGCAGCAGGACCTACATAGGAGAAAGATACCATGCTGGCTTTCAAA
TATTAGTAAAATCTTGGCGGAGTCAGGCTTTGCCTACCTTTTACTTAACA
AAGATCGAAACACGCTTTCCGCTCAATCTGAACTAAAACAAAGGCTAAGA
GACAACTTTCTTCAACATTTTTACTCACAACTGAACTCTTGTGGTGAAAA
TGGAAAGCACGGAAACAAATTAAGAACCTACCAAAAATTTAAGATTTCAT
ATGAAAAAGAAAAATATCTAGATATACAAAATGTTAACTATCGCCGAGCT
ATGACTAAACTAAGGATCAGCGATCATCCACTGCAAATTGAAGTTGGTAG
GTACAACCAGACTCCACCAAATGACAGAATGTGTACATTCTGTGACAAGG
ATTGTATAGAAGATGAAATACATTTTATCTTAGAATGCTCACTATACTCA
GACATGCGCAGATCCCTCGTAAGTTCAATACAACTAGACAAGAAATATGC
ACATCTTACAAATAACGAGTTATTCACATGTATTATGTCTTCTAGAAACT
ACGTTATAATCGAAAAACTATGTGAATTTGTGTACAAATGTTTCAAGAAG
AGAGAAGAGACTCTATAGATTTAGATGGAATATAGCACAATGTTCCTTTT
CTTTTACTCCATGTCACCTAATGCATTTAGCCCATGTTAGGCATGAATAT
GCTATAAAGTTCATTGTCATTGTCATTGTCATTGTCATTATAAAGAGAGT
AGATTCTTCTCACATTAGACATATGAGTAGCACTGAAAAATTTATAATCC
TCACGCATTTTGACAAACCGACCATAGCTAAACCCATAAATTCCTACATT
TTCACCATTATCAAGAAGCGAGAGGAAGCTTGAGACTAACTTAACGTTAT
ATGCCTGACTACAACACTTTTGCCAACATGTGTATTGTTTTTGGTGTGAC
CTGTACTTAGCTCGGTTGGGTAAAAATGCACAATAAAGGCATTTATCAAT
TCAATATTGTCAGAGATTTTCTAAAGTCTGTTTTCCCTCAGGGTATATAC
TAGTATAGAGAAAGTAGGGCTATCCTAAAGACTAGTGATTCAATTGTATT
TTCACATGGACTGAGATGGGTGTTTAAGATATAACGAGCGTTGTAACGAC
GTCGACATTCTTTTTAAATTTCAGACACCATGGCCAGGCTATTCTCCATC
GTAACGGTCATTCTCGCGTTGTCCACCGTTGACCGCTCTACCTGGGCGTT
CCACGCCTGCACAAGTGAGGGGGTCGGTCTGGGCTGTGCCTGCGACAGCT
TCAACACCGTCGACTGTTCCAACAGGGGAGTAAAAGACGTTCCAGACCAA
GTCCCTCCCGACACTATCACCCTCCAGCTCAACAACAACAAAATACAGGG
ACTTGTGGAGAACCAGTTCCCGGGTCTGTCGTCTCTTCTCTCGCTGGACC
TCAGTAACAACAGCATCTCGTACGTCGAAAAAGGCGCGTTTTCTGCACTG
GGTAGTCTGACACAACTGCGACTAAATAACAACAAGCTCTCGTCCGTACG
AGCCGGTATGTTTGAAGGAATGCCGAGTCTAGACAGCCTGACTTTGAGTA
GCAACGCAGTACGGGATATAGAAAAGGGGTCGTTTGTTCATCTTCCTAGG
CTGACAACTCTGGATTTATCAAACGGATTACTAGTTGATATAGAAGTGGG
TTATTTTACACCCTTGGCAAACTTGCAGACACTCTACCTCTCGGGAAACC
CTGTACAGCGCATACTGAACGGCAGTTTCCAAGGTCTGGCCCAGCTACAA
GACTTGTACCTTATTGGTACCGAGCTTCTTGAGATATGGCCTGAGACGTT
CTCTGGAGCAGCAAACCTACAGTCGCTCTACGTCAGAGACAGCAAGTTGA
GAAGAATCGCTCCTGGCAGCTTTTTTACGCTGCCACGACTCAGCCACTTG
GACATACGCAACAACGCCTTACAAGTCATCGAACCGGGAACATTCACCAA
CATGCCCAACATCATGTCTGTTGATCTTAGCTATAATCCTTTGTCGACGT
TGAAGAGTTTTGCATTCAATCTGAAAGGACTCTCAACGCTTCGCGTGTGC
AACCTAAGCAACGCGCGTTTGGAGAATGTGGAGGAAAATGCCCTTGGAGG
AGAACCGCTTTGCGAAGACTTCTTTTGTGATCGTACACTACAGTTAGATC
TGAGTAACAACAACTTGGTGACGCTTGCAAACTCGTTTTGCAATCTGTCT
CAGACAATCATATTCACCGGCGAGGGGATTGTATATTCTCTAACCGGTAA
TCGTTTTAGTTGTGACTGTAGGCTTAGGAAGTTAGTCTCTTGTATTCCTC
TTGCAACGTACATTCGGTGTGACGCGCCGCAAGTTTTAAAGCACAAGTTT
CTCGACAAGATTTCTGTCGGAAATCTCAACTGCACTCCGCCGCGGATAGC
TACGTTCGTTCTTCAACAAGACGGCAGAAATGTGACGATGTTTTGCAACG
CTACAGGATTCCCTGAGCCGACCATCTCTTGGGAAACACCTGCGTCGCCA
GAGGGCGCGAGAAACAAAGAAGACGCCGGGCGCCAAATGAAAGGGACGGG
AACTTTGACCATCTCAGATGCGAGCAGTGAAGACGGTGGGACGTATGGAT
GTACAACCATCAACCCTGGGGGACGGGACTCACGCCTAGGGTATCTGGCT
TTCTTCGAAGTCCCCAAGGAATCTCCTAAGACATCTTACTTGGGGATCTT
ACCGTCAAACCTCGCGTGGTGTTTGATTGGAGCAGGTATTGGTTCATTTT
GCACCCTCCTTGTCAGTATCACCGTTTTCTGCATTTGCAGAAGACGTTGC
TCTGAATCATCCCACGAAACTACAACAAACCCAGAGGGACATGAGATGTT
GCGAGTTTACAATGAGACGCAGCTAGAGGATGTTGATGACTATGGAAACG
ATGATGATGATGATGATAATGATAATGACTATGAAGTACCCCATGCCCAC
GCGAGCAAGTTGACAACGCCGTTTAACGCCGGTGACCGGTTGTATCAGAG
CCTTGGAAAGGAAACTAGACCTGTCAGTGGCGGTCCACCCCAGCGACGCC
CCCCTCCCCCTCCTCCCCACAGGCACAACAGTCACTCTCATCCCTCTCAT
CAGGACTACACTCCCCTGGTCCGGGGAACGAGCTCGGCCAGGGTCTGAAN
NN Coding sequence (CDS) from alignment at Sc0000228:431859..436810+ >BlTCONS00113387 ID=BlTCONS00113387|Name=BlTCONS00113387|organism=Branchiostoma lanceolatum|type=CDS|length=2019bp|location=Sequence derived from alignment at Sc0000228:431859..436810+ (Branchiostoma lanceolatum)
ATGGCCAGGCTATTCTCCATCGTAACGGTCATTCTCGCGTTGTCCACCGT
TGACCGCTCTACCTGGGCGTTCCACGCCTGCACAAGTGAGGGGGTCGGTC
TGGGCTGTGCCTGCGACAGCTTCAACACCGTCGACTGTTCCAACAGGGGA
GTAAAAGACGTTCCAGACCAAGTCCCTCCCGACACTATCACCCTCCAGCT
CAACAACAACAAAATACAGGGACTTGTGGAGAACCAGTTCCCGGGTCTGT
CGTCTCTTCTCTCGCTGGACCTCAGTAACAACAGCATCTCGTACGTCGAA
AAAGGCGCGTTTTCTGCACTGGGTAGTCTGACACAACTGCGACTAAATAA
CAACAAGCTCTCGTCCGTACGAGCCGGTATGTTTGAAGGAATGCCGAGTC
TAGACAGCCTGACTTTGAGTAGCAACGCAGTACGGGATATAGAAAAGGGG
TCGTTTGTTCATCTTCCTAGGCTGACAACTCTGGATTTATCAAACGGATT
ACTAGTTGATATAGAAGTGGGTTATTTTACACCCTTGGCAAACTTGCAGA
CACTCTACCTCTCGGGAAACCCTGTACAGCGCATACTGAACGGCAGTTTC
CAAGGTCTGGCCCAGCTACAAGACTTGTACCTTATTGGTACCGAGCTTCT
TGAGATATGGCCTGAGACGTTCTCTGGAGCAGCAAACCTACAGTCGCTCT
ACGTCAGAGACAGCAAGTTGAGAAGAATCGCTCCTGGCAGCTTTTTTACG
CTGCCACGACTCAGCCACTTGGACATACGCAACAACGCCTTACAAGTCAT
CGAACCGGGAACATTCACCAACATGCCCAACATCATGTCTGTTGATCTTA
GCTATAATCCTTTGTCGACGTTGAAGAGTTTTGCATTCAATCTGAAAGGA
CTCTCAACGCTTCGCGTGTGCAACCTAAGCAACGCGCGTTTGGAGAATGT
GGAGGAAAATGCCCTTGGAGGAGAACCGCTTTGCGAAGACTTCTTTTGTG
ATCGTACACTACAGTTAGATCTGAGTAACAACAACTTGGTGACGCTTGCA
AACTCGTTTTGCAATCTGTCTCAGACAATCATATTCACCGGCGAGGGGAT
TGTATATTCTCTAACCGGTAATCGTTTTAGTTGTGACTGTAGGCTTAGGA
AGTTAGTCTCTTGTATTCCTCTTGCAACGTACATTCGGTGTGACGCGCCG
CAAGTTTTAAAGCACAAGTTTCTCGACAAGATTTCTGTCGGAAATCTCAA
CTGCACTCCGCCGCGGATAGCTACGTTCGTTCTTCAACAAGACGGCAGAA
ATGTGACGATGTTTTGCAACGCTACAGGATTCCCTGAGCCGACCATCTCT
TGGGAAACACCTGCGTCGCCAGAGGGCGCGAGAAACAAAGAAGACGCCGG
GCGCCAAATGAAAGGGACGGGAACTTTGACCATCTCAGATGCGAGCAGTG
AAGACGGTGGGACGTATGGATGTACAACCATCAACCCTGGGGGACGGGAC
TCACGCCTAGGGTATCTGGCTTTCTTCGAAGTCCCCAAGGAATCTCCTAA
GACATCTTACTTGGGGATCTTACCGTCAAACCTCGCGTGGTGTTTGATTG
GAGCAGGTATTGGTTCATTTTGCACCCTCCTTGTCAGTATCACCGTTTTC
TGCATTTGCAGAAGACGTTGCTCTGAATCATCCCACGAAACTACAACAAA
CCCAGAGGGACATGAGATGTTGCGAGTTTACAATGAGACGCAGCTAGAGG
ATGTTGATGACTATGGAAACGATGATGATGATGATGATAATGATAATGAC
TATGAAGTACCCCATGCCCACGCGAGCAAGTTGACAACGCCGTTTAACGC
CGGTGACCGGTTGTATCAGAGCCTTGGAAAGGAAACTAGACCTGTCAGTG
GCGGTCCACCCCAGCGACGCCCCCCTCCCCCTCCTCCCCACAGGCACAAC
AGTCACTCTCATCCCTCTCATCAGGACTACACTCCCCTGGTCCGGGGAAC
GAGCTCGGCCAGGGTCTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113387-exon-Sc0000228-1564993656:431859..436810 | BlTCONS00113387-exon-Sc0000228-1564993656:431859..436810 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000228 | genome | Sc0000228:431859..436810 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055638 |
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