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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000228:422602..426941+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113384 ID=BlTCONS00113384|Name=BlTCONS00113384|organism=Branchiostoma lanceolatum|type=mRNA|length=4340bp|location=Sequence derived from alignment at Sc0000228:422602..426941+ (Branchiostoma lanceolatum)
CTCCATCTCAGACCTTCTAGATGCGGCGGCCGCCTTCTAGGCGCGTGCGT
GGATACGATCTCTCCAGCATAAGAGCCCATGTTGAAGATAGTTAATCAGC
GCTCCAAACAAAATGAACGCCTGCTGCACCCAGAAGGTCTGCGAAGAAGG
CTAGTTTTGGTCGTGTTTGCCCAAGTGCATCTTGCTAAGTTGGCGTTTAA
TAGGGGGCGCGTCTATCCATACGTACCTTTCCCTTCGATTGCAAGTTCAA
CATGTTCTTTTTTTTCAGATTCGAGCTAAGTATGTTGGATGTTTGCCATG
AAATTGCACTGGTATGCTATTGGTCGAAAATTTGTACCGTTGTATCTTGT
AGATTTTAGAATATTTCCCCTTCTGTTTCTACAGATCAAAGAAGGACCAG
TTTTTGCGTCAGTTTCAAAACCTCCGAAAACGCAGCGACGAAATCAGGAA
AGGTTTAGAGCACAGAGAGCATTCACCCCGAAAAACCTGCATTGGACCGT
CTGCACTGCCATCGTCAAGCACGACAAGGTCTTCGGAAGGAAACTCTGTC
GGTTCCAAAGAAGATATATTCCGTGCCGGTGAAAAAACCGAAACCGCACG
GAAAAGATGGTCAATTGCAACTTGTGCGGTGGGGTGTTCACAACATATAC
AACGTCTAAGAGGGTTTCCAACATTCCCATGTCAGATCAAGCCAAGTCGA
CGTTTCAAAATCACGGAAGGCGACAAACATGTTTCTAGCAAGGATAAGGC
CGTATCAAAGCGTCGTGAAAGCCTCGATCCCACAATGTTAGCCTCTGTGC
TGGATGTAGACAGCTCTATTGTAAAGCTGGACGCACAGGTCTATGCCCGG
GTGCAATGGTCGCCCACGTCTGTTCGAAAGACTTTGGCACTCATGGGCGA
TGAAGAGCACAACGGAGGGAAGACAGTGCCTTCCTGCGGCGTGACGCGGC
AACGCAGAGCAAGTGTTGCTTGTCCCACCTGGACGAGCAGACCGAGCGGC
ACACGGCTTCCACCTTTAACGTCTAACAGGATGACTGACACGGCTGTTAT
GAGGAATGGCGCAAGCGTACGTGGACGAAGGCACTCTCTCCCTGAAATAA
CTGTTACTCATCCACCATTGACGGTCGAGTCACACGGTCACGTAGGCGGC
ATGGGGTCCTGTCTAGGCTTTGGCACAAAGTCTAGGTCAAGAAAATCTTC
AGTTACCTTCGCTGAAAGAAATATCATAAAAGAAGATGATGATGATGATC
TTCTCCTGTCTCATGACCTCGGTTAAAAGCATGCAGGCTGATTTGATTCC
TCATCAATATTGTACAGGAAAAGCAGTGAAAGATGAAATACACTTTATTT
GCCATTGCCCTCATTATAGCACCGAAAGAGACCAACTATTTAACCTAGTC
AGCAAACTTGTCCCCAGCTTTGTAACGTTGGGTAACATAAATTCGCCATT
TTTCCGATAATGGTTGACTGAAATCAATCTAGCAGAACAATAAACCATCC
TTTTTTTCTATTATTCTGTCAGTATCATGTACTATCTTTGCACTAATCAT
ATATATGGTAGATTTTGTCTCTAGTCGTGCTGACACCATAATATTTCAAC
TTGAAACTACCGTCCGCCGCACGCACAATGACGGTGTTGTCGGACAGGTG
TGAACATTATTTCGGGAGAGAAGATTCGTCTTGAATATCTTACCGCTAAT
TACATTTTATACAGCAGCTATTCGTTCCATCCTTGGCTTGAGGAGAGTGC
TATGGATATAGACGTGTCCAAGTAAAAAAAATACACGAAAAAACGGCCGT
ACCGCACGCATCAGGCCTTCGGGAACAACCCGTGTGTTGAGTCGGTAGAA
CGTCACTCAAAGTTCACCCCCACCGTCATGGAAATTTGTACATTATTCAT
CGGGGCGTTAGCTGGATGCCGTAGAAATGGTAATACTACTATGTCCATGT
GTTTCTGCTTGTGCTAAGAGCAAACTTTGAGGAAAATATCGCCATCAGTC
CACTATCACACACAACATTTAGACAAAAAAGTGTTCCTCGCAAACGTTTG
TCGTCTGCCGAATAGCAGGATTCTGGGTAACGAATATGGCGGCGGGAAAA
TTCACCGTAGTGCCGTAGCCATTGGTTGTAGCAACAAAGAAGGGTTTTGA
TGATTAATCACACTTAGAGTCCAGTTGTAGGTTAGCAAAAGAGATTCTAA
TAAGTTGTATTGTAAATAATTGTGTTGAGCAGGAAGCGGATGTGACATTT
GTCTTATAAACCAGCGAACAACTATGTAGTATAATTCTCCCACGAAGCCC
TCAGACTGTGACAATAAGGGACGGAGAGTTTTTGACGTAGCCAACTTCTA
ATGCATGGTTATCGAAGCTTTTCAGCCAGTGTTCTGAATACGTTAGTCTG
TCAAGTTTGCATTTCTAGCGGTATTACTGATGTTGCATCTAGCACATATC
CCTAAATACCCCGTTTTCGAAAAATCGCGAATTTAAGTACCCCGCGAATT
TATGTTACCCAACGTTACGTCGCACAGCCAATGCATATATCTCCCAAAAC
GTCGGGAATTTCATATTCCACTGTGCACAAAAAAAGAAATCAAACCCAAT
AGCAACTGTATAGTTTAGATGTAGCGCTAGTTGACGATTTTCATTTTACT
TTGTGTTTATTTCATTACTGTGTAATTATCATTATCTCATTATCTCATTT
CCTTGTATTCTTGCAACTAGCCCCCGGGCATGAATTTGCAATAAAGTTAT
TTTTATTATCAATAGATCTAGATAAGGCCATGTTGATCCGATTATATGGA
TAACATCCTCTGGGAACCCTAAGACTGATGCGACCGTGCGAATAAAACAA
AAGTTTGTAAAAAAAAGAAAAGTGCCTTCAGTATGAAATCTAAGTGGTCA
GGAAGGTTGAACAAATGACTAAACACACAGAGGTACGACGGTATTATAAA
ACTTACCAAGGTCAAAAAGGACACGAGGCATCTCTGACATCTGGTTATAG
CTTCCGGACGTCTCTCTGAAAACCTCTGACATCTTGTCGTCACGAGAGCG
AAGCATAGAATGACCAGGGAAACTTGAACTTGTTGTCAACTTCTTCTTCT
TCTTCTTTGGCAGTCCAGTCTCGGAAGACTATATGTGCGCCCCTGGGGTT
CTCTTGTGACTTCTGATGTGGCTTGAGAGTCCAGCTCTGGATTTGCACAC
CCTGTTGCACCAAGGACATTATATAATGTCCTTGGTTGCACACGCTGCAT
GAGTGCTGTGTGGTTAGGGGTGCATTAGGTTGTCAACAAAGCCACAAAAA
TTGTGCTTCCCTTGTCGCTACGGAAACAGTGTGGCAACCAATGAGAGACG
AGATATTTTGTGTACATCGGCCAATCACACTTTGTTATTGGCCAATCAGA
GGCGTGGGTACATGACAATTGGATCATGCCATCCAGGACAGGGGGGACTT
TTTCCAATAACAAAAAAGAAGAAACCAATCCAACAAAAAAAAAACGCAGA
ATTCACAAAAGGCACAGTACCACATATTCATAATGTCACATTGATTAAAC
AGCATAGTATAAAGTCTTATTTTGATAAGAAAAGCGACGGAATATTATGC
TGCTTTACTGTGGTTCAGATGTCTTGATCAAAGTGATAAATCTTCCCTTG
GTGCTGAAAAACCTTCTATTGGCCTGGACCTACAAACATTGACATTCCTT
TGCTGTTGCTACTTTATTTTCATACCTTGAGGCGCTTATAAAAATCGCCG
TGTTGCTGACCATTGACGTTTCCCGAGTTGTGTCCTACTTGCCAGGGACG
ACCATTGAGCGAGTGTGCTTGTTGTGATTAACGATTTCCCGGCCTGTCAT
CCACGGTCCATGGATGGTGGCCGATGTATAGACTCTCCTCAATAATAATG
AAAATCAGATAATGATTTGCATGATAATTATCTAATTATGTAAATCACCA
CTAAAGCTATCTACATACCAAAAATCATGACCATCCATCAACCCCTTCTT
GAGTTATTCTGTTTCAAAGTCTGAAGCAAAACCTGCTTCTTCACTTTAAA
AAAGCCAATGGGGGCCAAAACCACTACATGCACCACTTACTTTCTTACTT
TCCGAAGGGCTTTCTACCATTCAAAAATCACGACCATGACATGTCCAGAA
CACGAGATATCGAACCCAGAAGTTCCGCAGCAGTACCGTAACAGGCCGCT
AGGGGAACCAAAATCTTATTGTTTTTAGGTCTCATCAACACCTACCCAAA
TACCAAATATAAAGACAATCCATCAAGGCCTTCTCGAGTTATACTGCTAA
TGCACACACATACATACATACATAGAAACGTACCCCGAAC Coding sequence (CDS) from alignment at Sc0000228:422602..426941+ >BlTCONS00113384 ID=BlTCONS00113384|Name=BlTCONS00113384|organism=Branchiostoma lanceolatum|type=CDS|length=492bp|location=Sequence derived from alignment at Sc0000228:422602..426941+ (Branchiostoma lanceolatum)
ATGTTAGCCTCTGTGCTGGATGTAGACAGCTCTATTGTAAAGCTGGACGC
ACAGGTCTATGCCCGGGTGCAATGGTCGCCCACGTCTGTTCGAAAGACTT
TGGCACTCATGGGCGATGAAGAGCACAACGGAGGGAAGACAGTGCCTTCC
TGCGGCGTGACGCGGCAACGCAGAGCAAGTGTTGCTTGTCCCACCTGGAC
GAGCAGACCGAGCGGCACACGGCTTCCACCTTTAACGTCTAACAGGATGA
CTGACACGGCTGTTATGAGGAATGGCGCAAGCGTACGTGGACGAAGGCAC
TCTCTCCCTGAAATAACTGTTACTCATCCACCATTGACGGTCGAGTCACA
CGGTCACGTAGGCGGCATGGGGTCCTGTCTAGGCTTTGGCACAAAGTCTA
GGTCAAGAAAATCTTCAGTTACCTTCGCTGAAAGAAATATCATAAAAGAA
GATGATGATGATGATCTTCTCCTGTCTCATGACCTCGGTTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113384-exon-Sc0000228-1564993656:422602..422737 | BlTCONS00113384-exon-Sc0000228-1564993656:422602..422737 | Branchiostoma lanceolatum | exon |
| BlTCONS00113384-exon-Sc0000228-1564993656:422986..426941 | BlTCONS00113384-exon-Sc0000228-1564993656:422986..426941 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000228 | genome | Sc0000228:422602..426941 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055636 |
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