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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000228:310200..318260+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113337 ID=BlTCONS00113337|Name=BlTCONS00113337|organism=Branchiostoma lanceolatum|type=mRNA|length=8061bp|location=Sequence derived from alignment at Sc0000228:310200..318260+ (Branchiostoma lanceolatum)
CGGACGGCTCCAGTCCTCTCCACCTCGCCGTGAAGAGTGGGGATCTGAAG
ACGGTGATGACGCTGCTCGAGGTTCATCGGGAGTCCCTTCATTGGACCGA
TGTCAACGGGGTAAAAACGCATACTTACCTCCACAAGATAATGCTACTTA
ATGTATGGTAACATCTAATCTCTAAACAGATGTAAGGACCTGGCTTAGTC
TCCGTGTTTAGGTCGGAGCCAGCGAAGAGTTTTAAAAAAGATGGAATACT
AATTACATATTTCGCAAAAATAAAACAGTGAGACTGAGTGACAGGAAGGA
AAGTACAGAGTTGCCAGAATTAGTAATTTATCAACCTTGTGCGACAACTG
GCATTCCAGGTCATGGGCCAATGGAAGAGCCTACTAGTTCACAGGGGAGG
TATTGTTTTTGGTCTGTTTGTTTGTTCTTTTGCTTGTGTTTTGCAGTTAC
ATATTGTCCATATGCTAGCCACGTTCACCGTAGAGATACGTCATGACGGG
AAGTGACCAATTGACACATTGCATACGAGAAACTCAAAATATTTCTCGGA
GGTGTGAGGTTTTTGAACGCTTGTCTTAATTTTTTTTTCCTGTCATCTAT
TTTGTTTCAGGACACGCCCTTACACGTGGCTGCACGGAAAAACCACGCCC
ACCTCATCGACGCCCTGTTGTACGAAGGCAACCTTCCTGAAGAAGGCGCG
GCCATGAGGGAGAACAACAAACATCAGAACGCCCTGGATGTGGCCATCGA
GGCAGACGCACAGGAGGCGGCCATAGCCATGGCCAAACACAAACTGTAAG
TTTTCACTTGAGAGTTCATCAGCGTTGGTAGAAGTCATTCTGACGGGGGG
CGCCATAGACTTTCTGTAACATATGATCGACTGAAGCAGCGGAAAGTCCC
ATTTTTGTGTTGGCAATTGTAGTTCCTCTTTGATTCACAAACTGTAAATC
TTCATGTTAGAGTTAGAAAGTATTTCTATTCTAAAAGTGCAGAACATACT
TGTTTTCATTTGCATTTGGTAACGACAGACAGTAGGAACATTTGACAAAC
TTATGGGGAAGGTACGTAGCTATCTAGATTCCAGCCCACCATTGAATTTA
ATGAATACCGAAGTATTTAGCTGGAGGTCAAAGAAATGTTAACCATTGCA
TCGTTGTAGAAATAGTTGGTTTAGCTCACTATGCTAATCTCTGACTCCCT
CCAGATGGCGCAAGGTCCTGAAACATCCGGATCTGGATGATGCCAGCCAC
TCCAGCAGTGTTCCACAACTCTACAACATTGTCAAAACTATTCCAGACGC
GGCGGTGGTAACAACACTTAAATGTTTCATCTAACTACTGTACTTAAACT
TAACTCTGAAGCAAATTTGAACTACAACTGCCATGCGCCAACACACAAAT
TGGACTTACCCAGATTTTCGACTGATCAGCTCCAGTCTTTGTCGAGGATT
GGAGACTGGAGCTGATCATTAAAAAAATTGCATTTGTGTTGGCAGTTGTA
GTTCAACCATGATTCAGAATGACTTCTACCAACACAGATGAACTTTTAGG
TGAAGATTTAGAATGAATATCTACTTCAACGTAGAGCTCAAATATTGACT
ACGCAATATGCCGAGAAGAACACATTTATACAACCATGTAGGTGTAAAAT
CTTCTCTGAGGTGAAAGGTCTTTTTCATAATCTATGTAGTTTTGTTCTCG
TTACTATTGCATCTAACGTTATGTAGAAAGTTGTAGAGATTACTTTCAAC
CTCGTTTTTGAGGCGACCATGTAGATAGAAACCTGATATTAGCCTCCATA
GCAGGCTCTCTGTGCCTTTGGGGGGGGGGGGATAACGAGCCTAATTGTTA
CAGACTGGCTGCACAAACGACCCAGTACAAAAAGACGTCATCAGCAAAAG
CCAGAAAATTGGCCCGCAGAGCCTGCTATGGAGGCTATCTGATATAACTT
CAAAGTTTGTTTTCATGCAAACCTCAGGAGTTTATGGACAGGATGATTGA
CAAGGAGGGAGAGGTGGTGAATCCTTATGACGTCACGGATAAGAGGAAGG
TGCGTTTATCAGATTCAAGTAGCAAAAGTTGTTCTTCTTTTGTATTTTAG
CAAGTATGAATGTACAAGGAAGCAACCTTTCGAAAGACAATTACATCATA
TATATTTAGTTTCTCATGCTAGACACAATAAGCCGTGCGTGGTGCCCCAT
GATAAATGAAACACAAATCAATTATTCTGTGTTCATATTCCAAGTTCTGA
ATTGTCCTTGTCAGCGAGGCTTGACCTTTCCAATAGCAGCCGGGTAGCTA
CAGTTTGGCAGCCGTGGCTGTATGCCCTTCACAGCCATATACATACCAAT
AATTGATGAGACATGAACAATAAGTGAGAGTAGCTATCTTACGGACAATG
TAGCATGCAACTGCTTTCAAGTACACGCATTAAGTTAACTTACCTTTCCT
TCTAGGCTTGGACATATGACTTCAGTTATCTTAATGCAAGAGATCCTCAA
CGTTCCCCGCTGAAGGTAGGAAACTGATATGTACAATATACTAATACGTT
AACGTTTTGAAAGAAAATACAAAGAGGCGGAGGTGACTTTCCCTTGGTGG
CTATGCTACTGTTGCTTCTTGGCATGCTCAAAAACAAGAGTGTGTAATAC
TTGAAAACGTACGTTTTGCATCATGCATCGTCCTCAGTCTGAGGTTCGAC
CGCTTATAGGTGTAGCTGCCATCAACATGTGTTCACCGGACTACATAAAT
CCGCCACTTTGAAAAACAGTGGGTTTGAGAAATCCTTAGTGCAGCANTAC
GATTTAAGATATACTAGAGCACATTATACTGGTGGACGATGGGTTGGAGA
TCTGTTTGTACGTATCTGTTCAAGGTGGCGGAATTATGGAATTGTATTAG
TAGATTTAAATTCTTGATTGGAATCTTTGAGAAGGATGAATGTCTCATTG
GGTGGATTAGAAATGTATTCTACTTTTTGTTCTTCGCAGGCCATCATCGA
CCATGGCCGCTGGCAGTGCCTCCAGCACGGCCTAGTGGAGAAGATCATAG
AGCGCAAATGGTAGGTGAAGAAATCATAGATACTTGATGATGCATGTAAA
TACAAAATCATAACTTCAGGCAACGCTGATTTGATTTTTTTTAATGTTTT
CGTGCTTTCAGTGATGTCAGGGTACAAGATACCCTTCTTTCGATGATGGT
ATACGTTGCTATTTCTACCTGATGTGTAGAATTGATTTTGCTTTGCGATT
CTATGACAACATCTTGATAACAATGAGTCGGTTCGAGCTCTTAGTATTGG
TATTGGCATGTACACCTAAAGCACTGTGATGTGGGGGGGAAGGATAGCAT
GATATTCAGACCATACCATTATCATTCTATACGCACTATGTGGTCGTGCG
TCCAACTGTCACGCGCAAAATGAGTCACAGACTTCAAATTAAAACGTCCT
TCGTCTTCCAGGAACATGTTTGGATTAAAGATCTTCCTGGCAGGTCTTCT
GTTGCACATCATCTATGTCGTGCTGATCACAGTATTGACTTTGAGGGAGC
GGAATCTAGTGACCAGCTACAGCAACTGGCGAAATCGCACAAACGATACA
CATGGGATGTGCATAGGAAGCGTGGTACAGTACAAATTAATATTACATTC
ATATATAAAAAAAACTCGTAAAACGAAGAATTGCTGGAGCCAAATTGTTG
TTATTATGGACTGACCAGCAGTCTGCAAGTCATTTTGCCGGTCCACTTGT
CAAAACTAGCAACAACGTGTATCCACATTTTCTTTCCAGATGCACTCAGC
CGACTGCGCCTTGCCGTACTTAGTCTTGGTTTTCTCCGTGGTTGCCATTA
TTTCGGAGGCTTACAAAATGTTCTCTCGGGTACGTTGCACAATGCACACT
TTGTGAATCATAGTTATAGCACTGTCGTCTACAATAGCCTGGAGTCCAGC
CTTGCTAGCTTTGGTCCGCTCCCAACGTAGGGAGCGGACCAAAGCTAACA
ATCATTCATTGACAATACGTGTTTGTAATAAAACCATGTTACTAGTCTAT
GTAGAGAAATAACATTCAAATGTAGCCAAGCAACTTGTACCATGTAGCGA
AAGAACTTTGTGCCATGTAGCGAAAGAACTTTGTGCCATGTAGAGAAACG
ACTGTAGCAGAATTACAATGTAGCGAAACAACGGGCTACCTCTACAACTA
TCTTAGAAAAATATTTTAGTCGTTGTCATGATAGTTTTATTGTTATCTAA
AGGAGTACAATAAAGATTGGTTGGTAAGTAACAGACAATTTTACTTTGTA
CTTAACTGATGTTTGTGCATTTCCAGAGAATACGCTACCGGTTGATTCGG
AACGTAGACATAATGACCTGTACGCTGTACGTCAGCGCCTTCGTGTACGC
GCTGAGCTTCCCAGTCCCCGCCATCTTGGGCAGTGACGAGTCGTCCCGGG
TGGTGGTGGGGGCCATCGCTGTGCTGTTCGGATGGCTCAACCTTGTTCTG
TTTCTCAGAAGGTATAAGCTGGATAACGGTTTGAACTGTGCATGCGCAGG
GTGGTGTATTGGGGGCAATATATGTCAAAGTGGATGGCCGCTGAGACATA
AACAACACACGTCTGGACGTCGTATCAAGCAAGGTAAAGACAACAGCTGT
CTACAAGATAGGGGCCTTCACCTTAGGCCTCGTGCGCATGTGCAGCTCAA
GCCGTGAATCGGCTTATTTTCATCAATATGCCAAGAAAACGAAATTAGAC
TCTTATCATCTTGTACTTATGATGTTTAAAGATGGTGTTTTCATCCTAGT
GCACTTTTGAAGTCCACTATAATTGTTCTGCTACATGTAGTTGTGAATCT
TGGATTATTTTGCGCTCGGCTAAGCTGGTAAAGAAGCACTCACCTAAATT
CAATATGTAATGGAAACAATGCTATTATCAACGCAACATGGTATGTATTT
TGTAATTTTCATTGCTGGTCAGATGAGCTTGCTTATTATTGAAATCTGTT
GATCCGGAAGCACTTGACTTGACATTTGACGTTTGACCCGGATGTGTTTT
GTGGTGTTTCTGACAGGGTCGCCATCATTGGTCTGTACGTGTACATGATG
AGTGCCATCTTTAAGACCTTGGTGAAGGTGCTGGCTGTGTTTGTACTGTA
CCTGATGGCCTTCACCTTCGCATTCTTACACCTCATGCGCGATTCAGGGG
TAAAACAACTTTTTTTCAAAATTTCCCCCTTTATTCAGTTTAACCAAACC
TGTGCATTATTAAGACTAAGGATTCATAGCATGAGTACAAAACACGACAT
ACAAATATACACTTGTTAAGATTTGTATACAAAATGTTATAAAGGCTAGA
GTGTCAAAGCATATGTAAAGTCCTATTGCGTATTTTCATGCAAGGTTTAA
ACTTGGTCTCTAGCTTCGTCTCGTTAAGCGTAATCTTATCTTATATTTCC
CAAAAATCTTTAAGCCTCTTACATAGCGTGTAAAACAGCTCTTTACATGT
ATAAAATAATTCTCATCACAATAAATGAAACATATATTTCTCTTCTAAGT
TTGTGTTACAACGTAAATATGATTTAGCCTCCTTCGCAGACTTCTAGGGG
GGCTGATTCGTGATTTTCAGCATAGGCCAGCTTCTTTCTGATTGCTTGTG
TCTATTTCTTGTAATCGTACGTACTGTAATTTGATTACCTTCTAGGTTGA
GGGGTTCGACAACGCTTGGGTGACGTTCATGACCACTGTTGGCATGATGA
TCGGAGAACTCGAGCTGAACGAATCCTTCATCTCAAGTGCCGTCGAATAC
AAGCCCGGCTGGAGCAAACCCGTGGCCTTCCTCTTCCTCCTGCTCTTCGT
GTTGTTGATGAACATCGTCGTTATGAATCTCTTGGTACGGTCTCTTGTCG
ACCAAACTTCTTTTTTCTATTAGGCCATGTTGATTTGATTACAAGAATGA
TATCCTCTAGGATCACCGGGACTGTTGCGACCGTGCGAATAAAAAAAATG
GCATAAAGAGTTGCCTTCAGTCTGAAATCTACACAGTCATCAAGGTTGAA
CAAAGGACAAAACACACAGAGTATGATATACCGAATGACATACTCTTCAT
TTTTGCATCTTTCACTTCTTCTTTGACTTCACAATTTACTTAAGCGTTCT
ACGACATTAGTATCTGTTTTCTGTGATATCTATTTTTTTCATTTGAGGGT
ATGTATGTGCTCATTTTGCAGCTGCTTTGTGTGATTTTCAATGTGGTTGG
AAACTTTTGGGGGGAGGGGAATCGGACGAAAATGTATGCGTACACAGATG
TCATCCAAATAATCAAATCAACGTGGCCTTATCATCCTTGGAATGTGTTT
GCATGGTTGTTAGAATAAACGTTACTTAATTCATGGACACACTTAAAAGG
TGGGCCTGGCACAAATCTATCTTACGTGGTCATTTGCAAATCTTCGTTGC
AACTGGTGGTAAAGGTGCTTTACCTTCCTAATCCTCCAGGTGGCGCTCGC
TGTTGATGACACCCACACAATTGACCAGGAGGCCTCGTTGGAACAGCGCA
TACAGCAGGTTACACATCTTATAGAAATAACCAATGGGGTGGTTTTACAA
CAAAATTAATTCTACGTTGATATAACAGCACATTTCCGCATTATCTAGCT
AACATAGATTGTAGATTTAGTACCGCCTTCCAAAAAAAATAAGTTTACGT
TAATGATCAATGTACATGTATTCGTTATGTATACGTTCCTTTTCATCTTG
CAATCTGAATGTATGTCAGTATCTATATGTGTAACGAACCCTGTAAGATT
AGTCGTGATACGACTAAAGGGCATCGAAACAAACCAAATTTTAAGTTTCG
GGTTATTCAACAGAAATTGTTCTGTTTTCTACTTATTCGTCAGGTCGAAT
ACATCCTAGAAGTAGAGTCAGAGTTCGGGAGGATTGTGGGTGATCGGCAC
TTCCGGGTTCCAGACTGGACGGCCAAACACAAGAGGAGCTGGATCGACCA
GGTGAGCAGCTCTCGTACAAACGTGCAAGTATTTACTTCCGAACACTGCC
CTCTCATACAACCATTCATGTCCTTGGTACTGAACGCTTCTCCACTCACT
CATACATACGTGCATGTCCTTGGTACTGAACACTTTCCCTCTTACACAAA
TGCGCATGTCCTTCACACTAAAAACTCCACTCTCACACAGACTTGGGCAT
CCTTGTGACTGAGTGATTATCCCACAAACGTGCGTGTCCTTGTTACTGAA
CGTAATTTTTGTGTCCATTTCAGGTTTTCAATGTGAAGAAAACCCGAATC
AAAGCAGACCGCCGTGGTGGAGGCATGACCAAAGCGGGACTTGACATGGA
CGCCAAGAGGCTGTCTCGGGTCTGAGCCTACATGTGTCGTACTGTGCGCT
TCCTTTTCATTTTGTAGCCTAAATAGCTCTCTGTGCCTTTTATGGGGGGG
GGGGGCTTTTGCTGATGACATCGTTTTTCTGCTGGGTCGTTTGTGATACA
GTATCTAGAAAAACAAAATGTATAATTCGTTGAAGAAGGTTAGATTTCCA
GGTAGTAAGATACGCCAAAAATAGTTACTCAAGTAACTGGATAAAATTTT
GAAACAGTCAGGCGTTTCAGACAGCATCCGCTGTCTTTCAGTCACTGACG
AAAGATAGCGGATGCTGTCTAAAACGTCTGTTTCAAAATTTTATCCAGTT
GCTTGAGTAACTATTTTTGGCGTAAAATGTATAATTTGCTAAATCTAAAT
GATGATGAAGGTTGTTGAAATAAGTGAACTCGCAGTTTATCATATGAAGC
ACGGGCGGATGTCATCCAGAAAATCAAGTCAGTATGGTCCTAAGTAATAA
CAGTTTATTCTACAATAAAAAGCATTTGGTAAAATGTAACGTTGGGTAAC
ATAAATAAGCGGGGTACTTAAATTCGGGATTTTTCGAAAACGGGGTGTTT
AGGGATATGTGCTAGATGCAACATCAGTAATACCGCTAGAAATGCAAACT
TGACAGACTAACGCATTCAGATCACTGTCTGAAAAGCTTCGATAACCATG
CATTAGAAGTT Coding sequence (CDS) from alignment at Sc0000228:310200..318260+ >BlTCONS00113337 ID=BlTCONS00113337|Name=BlTCONS00113337|organism=Branchiostoma lanceolatum|type=CDS|length=1236bp|location=Sequence derived from alignment at Sc0000228:310200..318260+ (Branchiostoma lanceolatum)
ATGGACAGGATGATTGACAAGGAGGGAGAGGTGGTGAATCCTTATGACGT
CACGGATAAGAGGAAGGCTTGGACATATGACTTCAGTTATCTTAATGCAA
GAGATCCTCAACGTTCCCCGCTGAAGGCCATCATCGACCATGGCCGCTGG
CAGTGCCTCCAGCACGGCCTAGTGGAGAAGATCATAGAGCGCAAATGGAA
CATGTTTGGATTAAAGATCTTCCTGGCAGGTCTTCTGTTGCACATCATCT
ATGTCGTGCTGATCACAGTATTGACTTTGAGGGAGCGGAATCTAGTGACC
AGCTACAGCAACTGGCGAAATCGCACAAACGATACACATGGGATGTGCAT
AGGAAGCGTGATGCACTCAGCCGACTGCGCCTTGCCGTACTTAGTCTTGG
TTTTCTCCGTGGTTGCCATTATTTCGGAGGCTTACAAAATGTTCTCTCGG
AGAATACGCTACCGGTTGATTCGGAACGTAGACATAATGACCTGTACGCT
GTACGTCAGCGCCTTCGTGTACGCGCTGAGCTTCCCAGTCCCCGCCATCT
TGGGCAGTGACGAGTCGTCCCGGGTGGTGGTGGGGGCCATCGCTGTGCTG
TTCGGATGGCTCAACCTTGTTCTGTTTCTCAGAAGGGTCGCCATCATTGG
TCTGTACGTGTACATGATGAGTGCCATCTTTAAGACCTTGGTGAAGGTGC
TGGCTGTGTTTGTACTGTACCTGATGGCCTTCACCTTCGCATTCTTACAC
CTCATGCGCGATTCAGGGGTTGAGGGGTTCGACAACGCTTGGGTGACGTT
CATGACCACTGTTGGCATGATGATCGGAGAACTCGAGCTGAACGAATCCT
TCATCTCAAGTGCCGTCGAATACAAGCCCGGCTGGAGCAAACCCGTGGCC
TTCCTCTTCCTCCTGCTCTTCGTGTTGTTGATGAACATCGTCGTTATGAA
TCTCTTGGTGGCGCTCGCTGTTGATGACACCCACACAATTGACCAGGAGG
CCTCGTTGGAACAGCGCATACAGCAGGTCGAATACATCCTAGAAGTAGAG
TCAGAGTTCGGGAGGATTGTGGGTGATCGGCACTTCCGGGTTCCAGACTG
GACGGCCAAACACAAGAGGAGCTGGATCGACCAGGTTTTCAATGTGAAGA
AAACCCGAATCAAAGCAGACCGCCGTGGTGGAGGCATGACCAAAGCGGGA
CTTGACATGGACGCCAAGAGGCTGTCTCGGGTCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113337-exon-Sc0000228-1564993656:310200..310309 | BlTCONS00113337-exon-Sc0000228-1564993656:310200..310309 | Branchiostoma lanceolatum | exon |
| BlTCONS00113337-exon-Sc0000228-1564993656:310810..310994 | BlTCONS00113337-exon-Sc0000228-1564993656:310810..310994 | Branchiostoma lanceolatum | exon |
| BlTCONS00113337-exon-Sc0000228-1564993656:311404..311508 | BlTCONS00113337-exon-Sc0000228-1564993656:311404..311508 | Branchiostoma lanceolatum | exon |
| BlTCONS00113337-exon-Sc0000228-1564993656:312177..312248 | BlTCONS00113337-exon-Sc0000228-1564993656:312177..312248 | Branchiostoma lanceolatum | exon |
| BlTCONS00113337-exon-Sc0000228-1564993656:312655..312714 | BlTCONS00113337-exon-Sc0000228-1564993656:312655..312714 | Branchiostoma lanceolatum | exon |
| BlTCONS00113337-exon-Sc0000228-1564993656:313189..313259 | BlTCONS00113337-exon-Sc0000228-1564993656:313189..313259 | Branchiostoma lanceolatum | exon |
| BlTCONS00113337-exon-Sc0000228-1564993656:313661..313823 | BlTCONS00113337-exon-Sc0000228-1564993656:313661..313823 | Branchiostoma lanceolatum | exon |
| BlTCONS00113337-exon-Sc0000228-1564993656:313989..314078 | BlTCONS00113337-exon-Sc0000228-1564993656:313989..314078 | Branchiostoma lanceolatum | exon |
| BlTCONS00113337-exon-Sc0000228-1564993656:314526..314710 | BlTCONS00113337-exon-Sc0000228-1564993656:314526..314710 | Branchiostoma lanceolatum | exon |
| BlTCONS00113337-exon-Sc0000228-1564993656:315266..315398 | BlTCONS00113337-exon-Sc0000228-1564993656:315266..315398 | Branchiostoma lanceolatum | exon |
| BlTCONS00113337-exon-Sc0000228-1564993656:315895..316083 | BlTCONS00113337-exon-Sc0000228-1564993656:315895..316083 | Branchiostoma lanceolatum | exon |
| BlTCONS00113337-exon-Sc0000228-1564993656:316689..316757 | BlTCONS00113337-exon-Sc0000228-1564993656:316689..316757 | Branchiostoma lanceolatum | exon |
| BlTCONS00113337-exon-Sc0000228-1564993656:317093..317200 | BlTCONS00113337-exon-Sc0000228-1564993656:317093..317200 | Branchiostoma lanceolatum | exon |
| BlTCONS00113337-exon-Sc0000228-1564993656:317473..318260 | BlTCONS00113337-exon-Sc0000228-1564993656:317473..318260 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000228 | genome | Sc0000228:310200..318260 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055632 |
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