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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000228:305356..308310+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113335 ID=BlTCONS00113335|Name=BlTCONS00113335|organism=Branchiostoma lanceolatum|type=mRNA|length=2955bp|location=Sequence derived from alignment at Sc0000228:305356..308310+ (Branchiostoma lanceolatum)
AGATCACTGTGTGCTTTGTGCGGCCGTTGAACCATGTGCTCTCTTTGGAA
GCTGGCCAAAAACCCCTGCGGCTCTTCCGTACCGTGTTGTAACTTACAGT
GCTGCTGCATAACAGTTTTCGGTCAGTGACTCTTAACATTGCTTTTCGGG
ACAAATTTCGGTCGTCTCAACTATGTGTTATTCAAATGTGTCACCATTTC
GTTTTGGATAGAATCCGATAGATCTAGGCCGGATATTTATTTATGACTAT
ATATGATATTAACAAGCTTCAAACTTCTATTTTTGTCCATAAAATAATCA
ATGATAGTTACTGTGTACCAAATCAATTCAAACGTCTTTTTCATTACAAC
TCGGAATTTCATCATTATAATACAAGGCAACGAAACAACTTGAAACAGAT
ACAAGCAAAAACACAGCAGCGAATGTTCTCCATGATGTACAGATGCCCGC
AAACTTGGAATAGCTTACATGAAAACTTACAAAACTGCAAATCACTACTG
AGATTCAAAAACATGTTAAAAAGCTCCATTTTAAACAATCAATCCTTTGC
TTAACCTTCTATTCTTTGGTTTTCATTTATATCCTGCATGTCTGGGTGCA
TTTTTTGTGTTATTGACTAAAATGTGTTGTTATATATGCTTGTCGTTATT
TGCATCGTTATTATTTATCGAATTGTTTCCTTGCTTACTTAGTTGGTAAT
TTTTCTGTGTTCAGTTAGGTAATTGTTTCTTTATATATAATGATTTAGTT
CTTGTTTTTTGTTATTGTTATTATTAGTTATTGATTTGTTAGACTATTTG
TTACGATATTAAGTTGTCATTTTTTTCTCTATATCTTAATTCATCATTGT
AATTTATTCTGTTTGAAAAATGGGGATGGAATATTATAGACCACATTGGT
CTCTACCTTCCCCGGCACTATGTGTATTGATCTGTCATATGTATGTAAAA
TTCTTTTACCTGTGCGAAATAAAAAGACAAAAGACAAGATATTTGGTATT
GAAAAGATGGTAAATTTGCCATGGAACCTCCATGTGACTTTCCTTCTTTC
CATTGATAACTTTCCTTTCCTTTATTCTGTTTTCTCATCTTGCGTACTGG
ACATGCTGGCAAACAGCGTTTAGTGTCGGGCGGAAGTGGTATGAATTTGC
CAAGCAATGTTAGGTCACCATAACTGCAGAACCCCTGGATAGATTGGTAG
GATTTTTTGTATGTGGGTAGGTATTGGGTTGCACGAACGGCCGTTTTTGG
GCCCCCTGGTATGTATATGACGGTCACCTTGTTTGACTATGTTTGTCACT
GATTCCACCATCAATATATTGATATGACCAACCGATCAAGGAGTGAGCCT
CTTGCAATAGACCAGTCATGGTTTTGCTGTGCTAAAATAGTAAAAAGGTG
ACAAACTGGAATGGTATTTTTGTGGTGCAGATTCTGCTTGACGTTGGACA
AATGAACGTGAACGTCCCGGGACAGGACCACAGGACAGCCCTTCACATAG
CCGTGAACAGTAACGACATAGACATGGTCAGCGTACTCGTAAGTAAATAC
TTGCATAGCACAGTACTTCAGTCACGTATTCTGCATCTGAGCATATGCAG
TTCCTTTCCTATTTATTCTGCCAGGTATACTTCGCTGTCTTGTGACTTGT
AAGTAATATTTCATTTGTGGAAAAGTCGAAACAGTGATGAGCTAGTGTGA
TCATAAATATGATCGCTGTTTGGTAAAGTCATGTTACGTATTGTTACTGC
TAGACTTGCCAAAATAATGTATAAGCTGCAACTGAGATTCTATACTTACT
GGTATATTAGAAGAGTATAAGGTGAATTACGTAAGAGATGTTTATCTATC
TGTTATACAGTCATAGATACATAAATGATAAATCGTTTAAGGTGTGCAGC
TGTATCCTTAGAGCGTGATATAAGTCGTGTAAAATTATTTTCATTTATCA
TTAAAAAATCCTCCTCTTTGTGCTATATTAATCAAATTGGTATTTTGTTT
ATGCTTTTTCCACCACGCGTTTCCTGTATGTATTTCAGCTTGACCACAAC
GCTGATATCGACCTCAAGGATATCTACGCGATGTCACCACTGACCCTGGC
GGCGTCTCGCCCCCAGTGCTCCGCAGAACTCTTCAAGCACATGTTGAGGA
AGAGTGGCCGTGGAACTTGGTATATAATTGGATGAAGAAGTTCCATTCGG
GTTGTTTTGTGCACCAGCTACCTTCTCGATTGATTTCTAAATCTCAATGC
TAACCGAAATATTGACAACCTGTTTTTCAATCTATCGGTTACTTGTCTTT
CAGCGATCGGAGAAAAGGACCTTGTAAGCCTGGTTCCACCTCAGACGTGA
GATGCCTTTTGTTTGCTTGTTTGGTAGTCTGGCGGATCTTTCGTCCATGA
CCCATAGATAGACACTTTAACAACCATACTAACTTGGCGCAGTAACTCCT
AATTCCACACCCTGATGATACTAAGGTCACATTATCAAGCCGGGGCCCGG
CCGAAAATAAAACCATTCATATCAAGAATATACATAACTGATGCTCATGA
TTATTTTTTTGTGTTTTGATGTCTTTTAATAGTTTTATATCATACTTTTC
GTTCCCGCTAACTGCCCGGCTGGGCCCCGGGTTAGGAATTGTTATCTTAG
CATTAGTGAGCGTTAAAGTCTTGTACAATATCCCTATTCGGGGTCACTCA
ACTGAAATACATGTATCTTAAAGAATACGAAAAAGGGTTTCGTTCGTTTT
CTTTTTAAACACACAACGATCACAGATCTCTAAGAAACTTAGCGTCAAGT
TCAGCGACAAGTTCGAGTCGACGCCGATGATGCTGGTCGCCCACATGGCG
GGGCACGACTCCGTGGTGAAGATGTCGCTGCTGCTGGAACATGGTGCCGA
GATCACGATGAGAGACCGCGATGGTAGAAACGTGCTACATCATGCCATGG
AGCAN Coding sequence (CDS) from alignment at Sc0000228:305356..308310+ >BlTCONS00113335 ID=BlTCONS00113335|Name=BlTCONS00113335|organism=Branchiostoma lanceolatum|type=CDS|length=441bp|location=Sequence derived from alignment at Sc0000228:305356..308310+ (Branchiostoma lanceolatum)
ATGAACGTGAACGTCCCGGGACAGGACCACAGGACAGCCCTTCACATAGC
CGTGAACAGTAACGACATAGACATGGTCAGCGTACTCCTTGACCACAACG
CTGATATCGACCTCAAGGATATCTACGCGATGTCACCACTGACCCTGGCG
GCGTCTCGCCCCCAGTGCTCCGCAGAACTCTTCAAGCACATGTTGAGGAA
GAGTGGCCGTGGAACTTGCGATCGGAGAAAAGGACCTTGTAAGCCTGGTT
CCACCTCAGACATCTCTAAGAAACTTAGCGTCAAGTTCAGCGACAAGTTC
GAGTCGACGCCGATGATGCTGGTCGCCCACATGGCGGGGCACGACTCCGT
GGTGAAGATGTCGCTGCTGCTGGAACATGGTGCCGAGATCACGATGAGAG
ACCGCGATGGTAGAAACGTGCTACATCATGCCATGGAGCAN
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113335-exon-Sc0000228-1564993656:305356..305476 | BlTCONS00113335-exon-Sc0000228-1564993656:305356..305476 | Branchiostoma lanceolatum | exon |
| BlTCONS00113335-exon-Sc0000228-1564993656:306786..306893 | BlTCONS00113335-exon-Sc0000228-1564993656:306786..306893 | Branchiostoma lanceolatum | exon |
| BlTCONS00113335-exon-Sc0000228-1564993656:307394..307524 | BlTCONS00113335-exon-Sc0000228-1564993656:307394..307524 | Branchiostoma lanceolatum | exon |
| BlTCONS00113335-exon-Sc0000228-1564993656:307659..307701 | BlTCONS00113335-exon-Sc0000228-1564993656:307659..307701 | Branchiostoma lanceolatum | exon |
| BlTCONS00113335-exon-Sc0000228-1564993656:308131..308310 | BlTCONS00113335-exon-Sc0000228-1564993656:308131..308310 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000228 | genome | Sc0000228:305356..308310 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055631 |
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