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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000228:303412..308310+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113334 ID=BlTCONS00113334|Name=BlTCONS00113334|organism=Branchiostoma lanceolatum|type=mRNA|length=4899bp|location=Sequence derived from alignment at Sc0000228:303412..308310+ (Branchiostoma lanceolatum)
GTTGGTGTGGGGAAACTTAGTGTCGCTTCAAGACAGGCTTGCGGGGTGGG
CCTTAGATTGTGAGGACGAACATGTTTTTCTACATTTTAACTAACAGTTG
AATGATTTCTATACATGTTTTGTGGGTGACAGACCTCAAAATACTAGGTA
ACCTCTTTGACCCTAGGCCCTGTACAGGGCTCAGGCGTAGGCACATTTTT
GCTTTCAGGCGTTTAGTTCATTAATGTCTACGTATGGATAGCCTGGCATT
GGTAGTCACGGTGACAAGTATTGAAGGGCGTCTGATATGCCTGTGCAGGG
GATAGTAGATGTATATTATAATACTGCAAGCAAAGGGCGACCTCCAAAAG
TTAAAAATTGTTCAAGGATCGATGAATCACTAGCCTGTCAGAAATTACCA
CCTGCCGTGCAAAATCTTCTCCCCCCTTGTAACACCTGGTAGTACTACTA
AGACGTCAAGGCCAAAGGTCACAACCGTCAACCACATCCTGTAAAGCAGT
TCAAAATGTTTTGTGACGGCTCAAACATTTCACGTATTTCAGAAGCACCA
TGAACTGAATGTATCGCAGCGACCGTGAAAAGATTTCATAAGAGTCAACA
ACAAAGCACAGCACTGTGTCAGTGAAAACAAATATGGCGAACCTGGTAGG
TATGGTTTCGTTTGCCTTCCTTTGAGATTGTTTAAAAAGGGGGGCTGTAG
ATATAGGTGGGAAATTTCTAGTTCAGAGGGTCAAGACCGCGAAATGGTTG
CATTTGAAGTTGATCTTCACCAGTCTCATCATATGTAAAGTTTTAGTAAA
CAAACTTTAGTTAGCTGAGTTGTATGCCTAAGGTTTATAGGTAACGCGAC
TAGTAAATGTCTCGTAAATGGGTTTCTCTCATATAATGAAAGACGCTTTC
TTAAACCGAACCCCCGGGCACTTCCTGGTCGATGCATGGTATAAATCCTG
AGGTGGGCACTAAAGACTGCATTGTATGCTGAAGCCTGAAGGGGTTAATA
CGTAGTGACTAGCAAAGCTTTCTTCACAGAGTCGCGATGCCATTGTTGTT
TGACGAGCATCCATGTCCTTTGAATAACGTAACTAGTGTTTTCTGTTAAT
CTTGCTTGGTTGAATATTCAACTTTATATCGCGCAACGAGTGATATACGC
TACTCTTTTACTTAACATGATTCATTGTTTTAAGATACAAAAACCGGAAG
TTCTGTTGTAGTATCATAACATGCCGCTAGGGGGCCCAAAAATTTAAAAA
AAATGGACTTGCAATTGCATCCGCATCAAAGCAAAGTATCAACAATGTAT
TGAGCTATCAATGAGATTGGCTTAACAAATTTGTTCACAAAGAAAATCAA
TTTGTTCAACAAAGAAAGGGAGACATCTCAAAGAGGGGCTCACTACTTCC
TGGAGATCATAATTAGAAAGAGACAGAGGGTACAGGAAATGTTTCCTGAC
CTTTCTTTCTCAAGCGTGTGTGGGGAATAGTCTGAAGACGGAAGTACCTT
AGATGTGGTATTTTTGGCGACACCACAGGGATAGCACGAATGCATCATCT
ATCGGAGACCGACTGTTTCATATCCCGATAACTCAAGAAACTGTGGCTTG
ACCTGTAAGATATTCTGCAACTTAGGACATACGTCGTCGAAGTGTTCTTT
AAACCCCTTTCTTGATCTTGTTGTTTCTCCAATATTTTCAAGACGTCATT
TCGAATGTCGTCATTAACGGAGGCACACCCGGCCAGCATGGCAATAGTAG
AAGCTATCCGGAACCGGGATCGGACGGGTTTGAGGGAGAAATTACGAGAG
AACAACGTCCATCAGTTCCGTACAGGCACCGGAGACACCTTGCTGCACCT
GGCCGTCAGGACAGGTGACGTCGAGTTGGTACAGGTGAGCTCAGGTATAC
ATATCTGACCAGCGTAATCTGTGAATTGTCACATGGCGGCTTGAAGATCA
CTGTGTGCTTTGTGCGGCCGTTGAACCATGTGCTCTCTTTGGAAGCTGGC
CAAAAACCCCTGCGGCTCTTCCGTACCGTGTTGTAACTTACAGTGCTGCT
GCATAACAGTTTTCGGTCAGTGACTCTTAACATTGCTTTTCGGGACAAAT
TTCGGTCGTCTCAACTATGTGTTATTCAAATGTGTCACCATTTCGTTTTG
GATAGAATCCGATAGATCTAGGCCGGATATTTATTTATGACTATATATGA
TATTAACAAGCTTCAAACTTCTATTTTTGTCCATAAAATAATCAATGATA
GTTACTGTGTACCAAATCAATTCAAACGTCTTTTTCATTACAACTCGGAA
TTTCATCATTATAATACAAGGCAACGAAACAACTTGAAACAGATACAAGC
AAAAACACAGCAGCGAATGTTCTCCATGATGTACAGATGCCCGCAAACTT
GGAATAGCTTACATGAAAACTTACAAAACTGCAAATCACTACTGAGATTC
AAAAACATGTTAAAAAGCTCCATTTTAAACAATCAATCCTTTGCTTAACC
TTCTATTCTTTGGTTTTCATTTATATCCTGCATGTCTGGGTGCATTTTTT
GTGTTATTGACTAAAATGTGTTGTTATATATGCTTGTCGTTATTTGCATC
GTTATTATTTATCGAATTGTTTCCTTGCTTACTTAGTTGGTAATTTTTCT
GTGTTCAGTTAGGTAATTGTTTCTTTATATATAATGATTTAGTTCTTGTT
TTTTGTTATTGTTATTATTAGTTATTGATTTGTTAGACTATTTGTTACGA
TATTAAGTTGTCATTTTTTTCTCTATATCTTAATTCATCATTGTAATTTA
TTCTGTTTGAAAAATGGGGATGGAATATTATAGACCACATTGGTCTCTAC
CTTCCCCGGCACTATGTGTATTGATCTGTCATATGTATGTAAAATTCTTT
TACCTGTGCGAAATAAAAAGACAAAAGACAAGATATTTGGTATTGAAAAG
ATGGTAAATTTGCCATGGAACCTCCATGTGACTTTCCTTCTTTCCATTGA
TAACTTTCCTTTCCTTTATTCTGTTTTCTCATCTTGCGTACTGGACATGC
TGGCAAACAGCGTTTAGTGTCGGGCGGAAGTGGTATGAATTTGCCAAGCA
ATGTTAGGTCACCATAACTGCAGAACCCCTGGATAGATTGGTAGGATTTT
TTGTATGTGGGTAGGTATTGGGTTGCACGAACGGCCGTTTTTGGGCCCCC
TGGTATGTATATGACGGTCACCTTGTTTGACTATGTTTGTCACTGATTCC
ACCATCAATATATTGATATGACCAACCGATCAAGGAGTGAGCCTCTTGCA
ATAGACCAGTCATGGTTTTGCTGTGCTAAAATAGTAAAAAGGTGACAAAC
TGGAATGGTATTTTTGTGGTGCAGATTCTGCTTGACGTTGGACAAATGAA
CGTGAACGTCCCGGGACAGGACCACAGGACAGCCCTTCACATAGCCGTGA
ACAGTAACGACATAGACATGGTCAGCGTACTCGTAAGTAAATACTTGCAT
AGCACAGTACTTCAGTCACGTATTCTGCATCTGAGCATATGCAGTTCCTT
TCCTATTTATTCTGCCAGGTATACTTCGCTGTCTTGTGACTTGTAAGTAA
TATTTCATTTGTGGAAAAGTCGAAACAGTGATGAGCTAGTGTGATCATAA
ATATGATCGCTGTTTGGTAAAGTCATGTTACGTATTGTTACTGCTAGACT
TGCCAAAATAATGTATAAGCTGCAACTGAGATTCTATACTTACTGGTATA
TTAGAAGAGTATAAGGTGAATTACGTAAGAGATGTTTATCTATCTGTTAT
ACAGTCATAGATACATAAATGATAAATCGTTTAAGGTGTGCAGCTGTATC
CTTAGAGCGTGATATAAGTCGTGTAAAATTATTTTCATTTATCATTAAAA
AATCCTCCTCTTTGTGCTATATTAATCAAATTGGTATTTTGTTTATGCTT
TTTCCACCACGCGTTTCCTGTATGTATTTCAGCTTGACCACAACGCTGAT
ATCGACCTCAAGGATATCTACGCGATGTCACCACTGACCCTGGCGGCGTC
TCGCCCCCAGTGCTCCGCAGAACTCTTCAAGCACATGTTGAGGAAGAGTG
GCCGTGGAACTTGGTATATAATTGGATGAAGAAGTTCCATTCGGGTTGTT
TTGTGCACCAGCTACCTTCTCGATTGATTTCTAAATCTCAATGCTAACCG
AAATATTGACAACCTGTTTTTCAATCTATCGGTTACTTGTCTTTCAGCGA
TCGGAGAAAAGGACCTTGTAAGCCTGGTTCCACCTCAGACGTGAGATGCC
TTTTGTTTGCTTGTTTGGTAGTCTGGCGGATCTTTCGTCCATGACCCATA
GATAGACACTTTAACAACCATACTAACTTGGCGCAGTAACTCCTAATTCC
ACACCCTGATGATACTAAGGTCACATTATCAAGCCGGGGCCCGGCCGAAA
ATAAAACCATTCATATCAAGAATATACATAACTGATGCTCATGATTATTT
TTTTGTGTTTTGATGTCTTTTAATAGTTTTATATCATACTTTTCGTTCCC
GCTAACTGCCCGGCTGGGCCCCGGGTTAGGAATTGTTATCTTAGCATTAG
TGAGCGTTAAAGTCTTGTACAATATCCCTATTCGGGGTCACTCAACTGAA
ATACATGTATCTTAAAGAATACGAAAAAGGGTTTCGTTCGTTTTCTTTTT
AAACACACAACGATCACAGATCTCTAAGAAACTTAGCGTCAAGTTCAGCG
ACAAGTTCGAGTCGACGCCGATGATGCTGGTCGCCCACATGGCGGGGCAC
GACTCCGTGGTGAAGATGTCGCTGCTGCTGGAACATGGTGCCGAGATCAC
GATGAGAGACCGCGATGGTAGAAACGTGCTACATCATGCCATGGAGCAN Coding sequence (CDS) from alignment at Sc0000228:303412..308310+ >BlTCONS00113334 ID=BlTCONS00113334|Name=BlTCONS00113334|organism=Branchiostoma lanceolatum|type=CDS|length=666bp|location=Sequence derived from alignment at Sc0000228:303412..308310+ (Branchiostoma lanceolatum)
ATGGCGAACCTGACGTCATTTCGAATGTCGTCATTAACGGAGGCACACCC
GGCCAGCATGGCAATAGTAGAAGCTATCCGGAACCGGGATCGGACGGGTT
TGAGGGAGAAATTACGAGAGAACAACGTCCATCAGTTCCGTACAGGCACC
GGAGACACCTTGCTGCACCTGGCCGTCAGGACAGGTGACGTCGAGTTGGT
ACAGATTCTGCTTGACGTTGGACAAATGAACGTGAACGTCCCGGGACAGG
ACCACAGGACAGCCCTTCACATAGCCGTGAACAGTAACGACATAGACATG
GTCAGCGTACTCCTTGACCACAACGCTGATATCGACCTCAAGGATATCTA
CGCGATGTCACCACTGACCCTGGCGGCGTCTCGCCCCCAGTGCTCCGCAG
AACTCTTCAAGCACATGTTGAGGAAGAGTGGCCGTGGAACTTGCGATCGG
AGAAAAGGACCTTGTAAGCCTGGTTCCACCTCAGACATCTCTAAGAAACT
TAGCGTCAAGTTCAGCGACAAGTTCGAGTCGACGCCGATGATGCTGGTCG
CCCACATGGCGGGGCACGACTCCGTGGTGAAGATGTCGCTGCTGCTGGAA
CATGGTGCCGAGATCACGATGAGAGACCGCGATGGTAGAAACGTGCTACA
TCATGCCATGGAGCAN
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113334-exon-Sc0000228-1564993656:303412..303470 | BlTCONS00113334-exon-Sc0000228-1564993656:303412..303470 | Branchiostoma lanceolatum | exon |
| BlTCONS00113334-exon-Sc0000228-1564993656:303954..304056 | BlTCONS00113334-exon-Sc0000228-1564993656:303954..304056 | Branchiostoma lanceolatum | exon |
| BlTCONS00113334-exon-Sc0000228-1564993656:305104..305295 | BlTCONS00113334-exon-Sc0000228-1564993656:305104..305295 | Branchiostoma lanceolatum | exon |
| BlTCONS00113334-exon-Sc0000228-1564993656:306786..306893 | BlTCONS00113334-exon-Sc0000228-1564993656:306786..306893 | Branchiostoma lanceolatum | exon |
| BlTCONS00113334-exon-Sc0000228-1564993656:307394..307524 | BlTCONS00113334-exon-Sc0000228-1564993656:307394..307524 | Branchiostoma lanceolatum | exon |
| BlTCONS00113334-exon-Sc0000228-1564993656:307659..307701 | BlTCONS00113334-exon-Sc0000228-1564993656:307659..307701 | Branchiostoma lanceolatum | exon |
| BlTCONS00113334-exon-Sc0000228-1564993656:308131..308310 | BlTCONS00113334-exon-Sc0000228-1564993656:308131..308310 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000228 | genome | Sc0000228:303412..308310 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055631 |
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