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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000228:302826..308310+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113333 ID=BlTCONS00113333|Name=BlTCONS00113333|organism=Branchiostoma lanceolatum|type=mRNA|length=5485bp|location=Sequence derived from alignment at Sc0000228:302826..308310+ (Branchiostoma lanceolatum)
AGGGGACAGAGTGAAGTTCCTTTTTCTTGGAACCGCCCTGTACTTTGCTC
GCGCTCCCAATGTCACGCTATTTGGTTGGCATGTTTGAGTAAACAACTTG
AACCCCGCCCACCTGTACGAGTGAGAACATTATTAACAGGGACGACGCTC
TGTTTTGGCTGGAGGACGTATTAAGGTGCTTTATTGTTAACTTAGTCAGC
TCTTAGTTAACTTACAAACAGTCATAACTTTGTGCTCACGTTGTTCTGTT
CTGGGAGAACTGCCCGCAGCTGAGGAAGATAGTTGTTAGAAGGCGGATCT
CGTGACAGAAGCTTTCCGCGAAGCCGAACCCCAAGGCACTTCCTCGTGGG
TGCAGGCAGTGAAAATCTTGAGGACTGTCTGAGGTGGGTGCTAAAGACTT
CTTAAATTACTTCTTAAATTTTATGTTTTATAGCAGCAATATATTATTAA
CGTGTTGGTATGGCTAGATCTTAGTGGTAGTCTTATTAGAGTAGAATATC
CGATTACCCGAAAACCAACAATCCAGAACAGCTCAGGTTCATGGGCGCAT
TTTGTTTTTCTTAACATTTCGTTCGGAACTTGTCGGGTTGGTGTGGGGAA
ACTTAGTGTCGCTTCAAGACAGGCTTGCGGGGTGGGCCTTAGATTGTGAG
GACGAACATGTTTTTCTACATTTTAACTAACAGTTGAATGATTTCTATAC
ATGTTTTGTGGGTGACAGACCTCAAAATACTAGGTAACCTCTTTGACCCT
AGGCCCTGTACAGGGCTCAGGCGTAGGCACATTTTTGCTTTCAGGCGTTT
AGTTCATTAATGTCTACGTATGGATAGCCTGGCATTGGTAGTCACGGTGA
CAAGTATTGAAGGGCGTCTGATATGCCTGTGCAGGGGATAGTAGATGTAT
ATTATAATACTGCAAGCAAAGGGCGACCTCCAAAAGTTAAAAATTGTTCA
AGGATCGATGAATCACTAGCCTGTCAGAAATTACCACCTGCCGTGCAAAA
TCTTCTCCCCCCTTGTAACACCTGGTAGTACTACTAAGACGTCAAGGCCA
AAGGTCACAACCGTCAACCACATCCTGTAAAGCAGTTCAAAATGTTTTGT
GACGGCTCAAACATTTCACGTATTTCAGAAGCACCATGAACTGAATGTAT
CGCAGCGACCGTGAAAAGATTTCATAAGAGTCAACAACAAAGCACAGCAC
TGTGTCAGTGAAAACAAATATGGCGAACCTGGTAGGTATGGTTTCGTTTG
CCTTCCTTTGAGATTGTTTAAAAAGGGGGGCTGTAGATATAGGTGGGAAA
TTTCTAGTTCAGAGGGTCAAGACCGCGAAATGGTTGCATTTGAAGTTGAT
CTTCACCAGTCTCATCATATGTAAAGTTTTAGTAAACAAACTTTAGTTAG
CTGAGTTGTATGCCTAAGGTTTATAGGTAACGCGACTAGTAAATGTCTCG
TAAATGGGTTTCTCTCATATAATGAAAGACGCTTTCTTAAACCGAACCCC
CGGGCACTTCCTGGTCGATGCATGGTATAAATCCTGAGGTGGGCACTAAA
GACTGCATTGTATGCTGAAGCCTGAAGGGGTTAATACGTAGTGACTAGCA
AAGCTTTCTTCACAGAGTCGCGATGCCATTGTTGTTTGACGAGCATCCAT
GTCCTTTGAATAACGTAACTAGTGTTTTCTGTTAATCTTGCTTGGTTGAA
TATTCAACTTTATATCGCGCAACGAGTGATATACGCTACTCTTTTACTTA
ACATGATTCATTGTTTTAAGATACAAAAACCGGAAGTTCTGTTGTAGTAT
CATAACATGCCGCTAGGGGGCCCAAAAATTTAAAAAAAATGGACTTGCAA
TTGCATCCGCATCAAAGCAAAGTATCAACAATGTATTGAGCTATCAATGA
GATTGGCTTAACAAATTTGTTCACAAAGAAAATCAATTTGTTCAACAAAG
AAAGGGAGACATCTCAAAGAGGGGCTCACTACTTCCTGGAGATCATAATT
AGAAAGAGACAGAGGGTACAGGAAATGTTTCCTGACCTTTCTTTCTCAAG
CGTGTGTGGGGAATAGTCTGAAGACGGAAGTACCTTAGATGTGGTATTTT
TGGCGACACCACAGGGATAGCACGAATGCATCATCTATCGGAGACCGACT
GTTTCATATCCCGATAACTCAAGAAACTGTGGCTTGACCTGTAAGATATT
CTGCAACTTAGGACATACGTCGTCGAAGTGTTCTTTAAACCCCTTTCTTG
ATCTTGTTGTTTCTCCAATATTTTCAAGACGTCATTTCGAATGTCGTCAT
TAACGGAGGCACACCCGGCCAGCATGGCAATAGTAGAAGCTATCCGGAAC
CGGGATCGGACGGGTTTGAGGGAGAAATTACGAGAGAACAACGTCCATCA
GTTCCGTACAGGCACCGGAGACACCTTGCTGCACCTGGCCGTCAGGACAG
GTGACGTCGAGTTGGTACAGGTGAGCTCAGGTATACATATCTGACCAGCG
TAATCTGTGAATTGTCACATGGCGGCTTGAAGATCACTGTGTGCTTTGTG
CGGCCGTTGAACCATGTGCTCTCTTTGGAAGCTGGCCAAAAACCCCTGCG
GCTCTTCCGTACCGTGTTGTAACTTACAGTGCTGCTGCATAACAGTTTTC
GGTCAGTGACTCTTAACATTGCTTTTCGGGACAAATTTCGGTCGTCTCAA
CTATGTGTTATTCAAATGTGTCACCATTTCGTTTTGGATAGAATCCGATA
GATCTAGGCCGGATATTTATTTATGACTATATATGATATTAACAAGCTTC
AAACTTCTATTTTTGTCCATAAAATAATCAATGATAGTTACTGTGTACCA
AATCAATTCAAACGTCTTTTTCATTACAACTCGGAATTTCATCATTATAA
TACAAGGCAACGAAACAACTTGAAACAGATACAAGCAAAAACACAGCAGC
GAATGTTCTCCATGATGTACAGATGCCCGCAAACTTGGAATAGCTTACAT
GAAAACTTACAAAACTGCAAATCACTACTGAGATTCAAAAACATGTTAAA
AAGCTCCATTTTAAACAATCAATCCTTTGCTTAACCTTCTATTCTTTGGT
TTTCATTTATATCCTGCATGTCTGGGTGCATTTTTTGTGTTATTGACTAA
AATGTGTTGTTATATATGCTTGTCGTTATTTGCATCGTTATTATTTATCG
AATTGTTTCCTTGCTTACTTAGTTGGTAATTTTTCTGTGTTCAGTTAGGT
AATTGTTTCTTTATATATAATGATTTAGTTCTTGTTTTTTGTTATTGTTA
TTATTAGTTATTGATTTGTTAGACTATTTGTTACGATATTAAGTTGTCAT
TTTTTTCTCTATATCTTAATTCATCATTGTAATTTATTCTGTTTGAAAAA
TGGGGATGGAATATTATAGACCACATTGGTCTCTACCTTCCCCGGCACTA
TGTGTATTGATCTGTCATATGTATGTAAAATTCTTTTACCTGTGCGAAAT
AAAAAGACAAAAGACAAGATATTTGGTATTGAAAAGATGGTAAATTTGCC
ATGGAACCTCCATGTGACTTTCCTTCTTTCCATTGATAACTTTCCTTTCC
TTTATTCTGTTTTCTCATCTTGCGTACTGGACATGCTGGCAAACAGCGTT
TAGTGTCGGGCGGAAGTGGTATGAATTTGCCAAGCAATGTTAGGTCACCA
TAACTGCAGAACCCCTGGATAGATTGGTAGGATTTTTTGTATGTGGGTAG
GTATTGGGTTGCACGAACGGCCGTTTTTGGGCCCCCTGGTATGTATATGA
CGGTCACCTTGTTTGACTATGTTTGTCACTGATTCCACCATCAATATATT
GATATGACCAACCGATCAAGGAGTGAGCCTCTTGCAATAGACCAGTCATG
GTTTTGCTGTGCTAAAATAGTAAAAAGGTGACAAACTGGAATGGTATTTT
TGTGGTGCAGATTCTGCTTGACGTTGGACAAATGAACGTGAACGTCCCGG
GACAGGACCACAGGACAGCCCTTCACATAGCCGTGAACAGTAACGACATA
GACATGGTCAGCGTACTCGTAAGTAAATACTTGCATAGCACAGTACTTCA
GTCACGTATTCTGCATCTGAGCATATGCAGTTCCTTTCCTATTTATTCTG
CCAGGTATACTTCGCTGTCTTGTGACTTGTAAGTAATATTTCATTTGTGG
AAAAGTCGAAACAGTGATGAGCTAGTGTGATCATAAATATGATCGCTGTT
TGGTAAAGTCATGTTACGTATTGTTACTGCTAGACTTGCCAAAATAATGT
ATAAGCTGCAACTGAGATTCTATACTTACTGGTATATTAGAAGAGTATAA
GGTGAATTACGTAAGAGATGTTTATCTATCTGTTATACAGTCATAGATAC
ATAAATGATAAATCGTTTAAGGTGTGCAGCTGTATCCTTAGAGCGTGATA
TAAGTCGTGTAAAATTATTTTCATTTATCATTAAAAAATCCTCCTCTTTG
TGCTATATTAATCAAATTGGTATTTTGTTTATGCTTTTTCCACCACGCGT
TTCCTGTATGTATTTCAGCTTGACCACAACGCTGATATCGACCTCAAGGA
TATCTACGCGATGTCACCACTGACCCTGGCGGCGTCTCGCCCCCAGTGCT
CCGCAGAACTCTTCAAGCACATGTTGAGGAAGAGTGGCCGTGGAACTTGG
TATATAATTGGATGAAGAAGTTCCATTCGGGTTGTTTTGTGCACCAGCTA
CCTTCTCGATTGATTTCTAAATCTCAATGCTAACCGAAATATTGACAACC
TGTTTTTCAATCTATCGGTTACTTGTCTTTCAGCGATCGGAGAAAAGGAC
CTTGTAAGCCTGGTTCCACCTCAGACGTGAGATGCCTTTTGTTTGCTTGT
TTGGTAGTCTGGCGGATCTTTCGTCCATGACCCATAGATAGACACTTTAA
CAACCATACTAACTTGGCGCAGTAACTCCTAATTCCACACCCTGATGATA
CTAAGGTCACATTATCAAGCCGGGGCCCGGCCGAAAATAAAACCATTCAT
ATCAAGAATATACATAACTGATGCTCATGATTATTTTTTTGTGTTTTGAT
GTCTTTTAATAGTTTTATATCATACTTTTCGTTCCCGCTAACTGCCCGGC
TGGGCCCCGGGTTAGGAATTGTTATCTTAGCATTAGTGAGCGTTAAAGTC
TTGTACAATATCCCTATTCGGGGTCACTCAACTGAAATACATGTATCTTA
AAGAATACGAAAAAGGGTTTCGTTCGTTTTCTTTTTAAACACACAACGAT
CACAGATCTCTAAGAAACTTAGCGTCAAGTTCAGCGACAAGTTCGAGTCG
ACGCCGATGATGCTGGTCGCCCACATGGCGGGGCACGACTCCGTGGTGAA
GATGTCGCTGCTGCTGGAACATGGTGCCGAGATCACGATGAGAGACCGCG
ATGGTAGAAACGTGCTACATCATGCCATGGAGCAN Coding sequence (CDS) from alignment at Sc0000228:302826..308310+ >BlTCONS00113333 ID=BlTCONS00113333|Name=BlTCONS00113333|organism=Branchiostoma lanceolatum|type=CDS|length=666bp|location=Sequence derived from alignment at Sc0000228:302826..308310+ (Branchiostoma lanceolatum)
ATGGCGAACCTGACGTCATTTCGAATGTCGTCATTAACGGAGGCACACCC
GGCCAGCATGGCAATAGTAGAAGCTATCCGGAACCGGGATCGGACGGGTT
TGAGGGAGAAATTACGAGAGAACAACGTCCATCAGTTCCGTACAGGCACC
GGAGACACCTTGCTGCACCTGGCCGTCAGGACAGGTGACGTCGAGTTGGT
ACAGATTCTGCTTGACGTTGGACAAATGAACGTGAACGTCCCGGGACAGG
ACCACAGGACAGCCCTTCACATAGCCGTGAACAGTAACGACATAGACATG
GTCAGCGTACTCCTTGACCACAACGCTGATATCGACCTCAAGGATATCTA
CGCGATGTCACCACTGACCCTGGCGGCGTCTCGCCCCCAGTGCTCCGCAG
AACTCTTCAAGCACATGTTGAGGAAGAGTGGCCGTGGAACTTGCGATCGG
AGAAAAGGACCTTGTAAGCCTGGTTCCACCTCAGACATCTCTAAGAAACT
TAGCGTCAAGTTCAGCGACAAGTTCGAGTCGACGCCGATGATGCTGGTCG
CCCACATGGCGGGGCACGACTCCGTGGTGAAGATGTCGCTGCTGCTGGAA
CATGGTGCCGAGATCACGATGAGAGACCGCGATGGTAGAAACGTGCTACA
TCATGCCATGGAGCAN
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113333-exon-Sc0000228-1564993656:302826..303208 | BlTCONS00113333-exon-Sc0000228-1564993656:302826..303208 | Branchiostoma lanceolatum | exon |
| BlTCONS00113333-exon-Sc0000228-1564993656:303954..304056 | BlTCONS00113333-exon-Sc0000228-1564993656:303954..304056 | Branchiostoma lanceolatum | exon |
| BlTCONS00113333-exon-Sc0000228-1564993656:305104..305295 | BlTCONS00113333-exon-Sc0000228-1564993656:305104..305295 | Branchiostoma lanceolatum | exon |
| BlTCONS00113333-exon-Sc0000228-1564993656:306786..306893 | BlTCONS00113333-exon-Sc0000228-1564993656:306786..306893 | Branchiostoma lanceolatum | exon |
| BlTCONS00113333-exon-Sc0000228-1564993656:307394..307524 | BlTCONS00113333-exon-Sc0000228-1564993656:307394..307524 | Branchiostoma lanceolatum | exon |
| BlTCONS00113333-exon-Sc0000228-1564993656:307659..307701 | BlTCONS00113333-exon-Sc0000228-1564993656:307659..307701 | Branchiostoma lanceolatum | exon |
| BlTCONS00113333-exon-Sc0000228-1564993656:308131..308310 | BlTCONS00113333-exon-Sc0000228-1564993656:308131..308310 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000228 | genome | Sc0000228:302826..308310 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055631 |
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