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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000228:302760..308310+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113332 ID=BlTCONS00113332|Name=BlTCONS00113332|organism=Branchiostoma lanceolatum|type=mRNA|length=5551bp|location=Sequence derived from alignment at Sc0000228:302760..308310+ (Branchiostoma lanceolatum)
AATACGCTCAAAACAAGCCCGACCGCTACATCTCCTTGGAAATTAGGTCA
TTTCCACTCTCGCAGAAGGGGACAGAGTGAAGTTCCTTTTTCTTGGAACC
GCCCTGTACTTTGCTCGCGCTCCCAATGTCACGCTATTTGGTTGGCATGT
TTGAGTAAACAACTTGAACCCCGCCCACCTGTACGAGTGAGAACATTATT
AACAGGGACGACGCTCTGTTTTGGCTGGAGGACGTATTAAGGTGCTTTAT
TGTTAACTTAGTCAGCTCTTAGTTAACTTACAAACAGTCATAACTTTGTG
CTCACGTTGTTCTGTTCTGGGAGAACTGCCCGCAGCTGAGGAAGATAGTT
GTTAGAAGGCGGATCTCGTGACAGAAGCTTTCCGCGAAGCCGAACCCCAA
GGCACTTCCTCGTGGGTGCAGGCAGTGAAAATCTTGAGGACTGTCTGAGG
TGGGTGCTAAAGACTTCTTAAATTACTTCTTAAATTTTATGTTTTATAGC
AGCAATATATTATTAACGTGTTGGTATGGCTAGATCTTAGTGGTAGTCTT
ATTAGAGTAGAATATCCGATTACCCGAAAACCAACAATCCAGAACAGCTC
AGGTTCATGGGCGCATTTTGTTTTTCTTAACATTTCGTTCGGAACTTGTC
GGGTTGGTGTGGGGAAACTTAGTGTCGCTTCAAGACAGGCTTGCGGGGTG
GGCCTTAGATTGTGAGGACGAACATGTTTTTCTACATTTTAACTAACAGT
TGAATGATTTCTATACATGTTTTGTGGGTGACAGACCTCAAAATACTAGG
TAACCTCTTTGACCCTAGGCCCTGTACAGGGCTCAGGCGTAGGCACATTT
TTGCTTTCAGGCGTTTAGTTCATTAATGTCTACGTATGGATAGCCTGGCA
TTGGTAGTCACGGTGACAAGTATTGAAGGGCGTCTGATATGCCTGTGCAG
GGGATAGTAGATGTATATTATAATACTGCAAGCAAAGGGCGACCTCCAAA
AGTTAAAAATTGTTCAAGGATCGATGAATCACTAGCCTGTCAGAAATTAC
CACCTGCCGTGCAAAATCTTCTCCCCCCTTGTAACACCTGGTAGTACTAC
TAAGACGTCAAGGCCAAAGGTCACAACCGTCAACCACATCCTGTAAAGCA
GTTCAAAATGTTTTGTGACGGCTCAAACATTTCACGTATTTCAGAAGCAC
CATGAACTGAATGTATCGCAGCGACCGTGAAAAGATTTCATAAGAGTCAA
CAACAAAGCACAGCACTGTGTCAGTGAAAACAAATATGGCGAACCTGGTA
GGTATGGTTTCGTTTGCCTTCCTTTGAGATTGTTTAAAAAGGGGGGCTGT
AGATATAGGTGGGAAATTTCTAGTTCAGAGGGTCAAGACCGCGAAATGGT
TGCATTTGAAGTTGATCTTCACCAGTCTCATCATATGTAAAGTTTTAGTA
AACAAACTTTAGTTAGCTGAGTTGTATGCCTAAGGTTTATAGGTAACGCG
ACTAGTAAATGTCTCGTAAATGGGTTTCTCTCATATAATGAAAGACGCTT
TCTTAAACCGAACCCCCGGGCACTTCCTGGTCGATGCATGGTATAAATCC
TGAGGTGGGCACTAAAGACTGCATTGTATGCTGAAGCCTGAAGGGGTTAA
TACGTAGTGACTAGCAAAGCTTTCTTCACAGAGTCGCGATGCCATTGTTG
TTTGACGAGCATCCATGTCCTTTGAATAACGTAACTAGTGTTTTCTGTTA
ATCTTGCTTGGTTGAATATTCAACTTTATATCGCGCAACGAGTGATATAC
GCTACTCTTTTACTTAACATGATTCATTGTTTTAAGATACAAAAACCGGA
AGTTCTGTTGTAGTATCATAACATGCCGCTAGGGGGCCCAAAAATTTAAA
AAAAATGGACTTGCAATTGCATCCGCATCAAAGCAAAGTATCAACAATGT
ATTGAGCTATCAATGAGATTGGCTTAACAAATTTGTTCACAAAGAAAATC
AATTTGTTCAACAAAGAAAGGGAGACATCTCAAAGAGGGGCTCACTACTT
CCTGGAGATCATAATTAGAAAGAGACAGAGGGTACAGGAAATGTTTCCTG
ACCTTTCTTTCTCAAGCGTGTGTGGGGAATAGTCTGAAGACGGAAGTACC
TTAGATGTGGTATTTTTGGCGACACCACAGGGATAGCACGAATGCATCAT
CTATCGGAGACCGACTGTTTCATATCCCGATAACTCAAGAAACTGTGGCT
TGACCTGTAAGATATTCTGCAACTTAGGACATACGTCGTCGAAGTGTTCT
TTAAACCCCTTTCTTGATCTTGTTGTTTCTCCAATATTTTCAAGACGTCA
TTTCGAATGTCGTCATTAACGGAGGCACACCCGGCCAGCATGGCAATAGT
AGAAGCTATCCGGAACCGGGATCGGACGGGTTTGAGGGAGAAATTACGAG
AGAACAACGTCCATCAGTTCCGTACAGGCACCGGAGACACCTTGCTGCAC
CTGGCCGTCAGGACAGGTGACGTCGAGTTGGTACAGGTGAGCTCAGGTAT
ACATATCTGACCAGCGTAATCTGTGAATTGTCACATGGCGGCTTGAAGAT
CACTGTGTGCTTTGTGCGGCCGTTGAACCATGTGCTCTCTTTGGAAGCTG
GCCAAAAACCCCTGCGGCTCTTCCGTACCGTGTTGTAACTTACAGTGCTG
CTGCATAACAGTTTTCGGTCAGTGACTCTTAACATTGCTTTTCGGGACAA
ATTTCGGTCGTCTCAACTATGTGTTATTCAAATGTGTCACCATTTCGTTT
TGGATAGAATCCGATAGATCTAGGCCGGATATTTATTTATGACTATATAT
GATATTAACAAGCTTCAAACTTCTATTTTTGTCCATAAAATAATCAATGA
TAGTTACTGTGTACCAAATCAATTCAAACGTCTTTTTCATTACAACTCGG
AATTTCATCATTATAATACAAGGCAACGAAACAACTTGAAACAGATACAA
GCAAAAACACAGCAGCGAATGTTCTCCATGATGTACAGATGCCCGCAAAC
TTGGAATAGCTTACATGAAAACTTACAAAACTGCAAATCACTACTGAGAT
TCAAAAACATGTTAAAAAGCTCCATTTTAAACAATCAATCCTTTGCTTAA
CCTTCTATTCTTTGGTTTTCATTTATATCCTGCATGTCTGGGTGCATTTT
TTGTGTTATTGACTAAAATGTGTTGTTATATATGCTTGTCGTTATTTGCA
TCGTTATTATTTATCGAATTGTTTCCTTGCTTACTTAGTTGGTAATTTTT
CTGTGTTCAGTTAGGTAATTGTTTCTTTATATATAATGATTTAGTTCTTG
TTTTTTGTTATTGTTATTATTAGTTATTGATTTGTTAGACTATTTGTTAC
GATATTAAGTTGTCATTTTTTTCTCTATATCTTAATTCATCATTGTAATT
TATTCTGTTTGAAAAATGGGGATGGAATATTATAGACCACATTGGTCTCT
ACCTTCCCCGGCACTATGTGTATTGATCTGTCATATGTATGTAAAATTCT
TTTACCTGTGCGAAATAAAAAGACAAAAGACAAGATATTTGGTATTGAAA
AGATGGTAAATTTGCCATGGAACCTCCATGTGACTTTCCTTCTTTCCATT
GATAACTTTCCTTTCCTTTATTCTGTTTTCTCATCTTGCGTACTGGACAT
GCTGGCAAACAGCGTTTAGTGTCGGGCGGAAGTGGTATGAATTTGCCAAG
CAATGTTAGGTCACCATAACTGCAGAACCCCTGGATAGATTGGTAGGATT
TTTTGTATGTGGGTAGGTATTGGGTTGCACGAACGGCCGTTTTTGGGCCC
CCTGGTATGTATATGACGGTCACCTTGTTTGACTATGTTTGTCACTGATT
CCACCATCAATATATTGATATGACCAACCGATCAAGGAGTGAGCCTCTTG
CAATAGACCAGTCATGGTTTTGCTGTGCTAAAATAGTAAAAAGGTGACAA
ACTGGAATGGTATTTTTGTGGTGCAGATTCTGCTTGACGTTGGACAAATG
AACGTGAACGTCCCGGGACAGGACCACAGGACAGCCCTTCACATAGCCGT
GAACAGTAACGACATAGACATGGTCAGCGTACTCGTAAGTAAATACTTGC
ATAGCACAGTACTTCAGTCACGTATTCTGCATCTGAGCATATGCAGTTCC
TTTCCTATTTATTCTGCCAGGTATACTTCGCTGTCTTGTGACTTGTAAGT
AATATTTCATTTGTGGAAAAGTCGAAACAGTGATGAGCTAGTGTGATCAT
AAATATGATCGCTGTTTGGTAAAGTCATGTTACGTATTGTTACTGCTAGA
CTTGCCAAAATAATGTATAAGCTGCAACTGAGATTCTATACTTACTGGTA
TATTAGAAGAGTATAAGGTGAATTACGTAAGAGATGTTTATCTATCTGTT
ATACAGTCATAGATACATAAATGATAAATCGTTTAAGGTGTGCAGCTGTA
TCCTTAGAGCGTGATATAAGTCGTGTAAAATTATTTTCATTTATCATTAA
AAAATCCTCCTCTTTGTGCTATATTAATCAAATTGGTATTTTGTTTATGC
TTTTTCCACCACGCGTTTCCTGTATGTATTTCAGCTTGACCACAACGCTG
ATATCGACCTCAAGGATATCTACGCGATGTCACCACTGACCCTGGCGGCG
TCTCGCCCCCAGTGCTCCGCAGAACTCTTCAAGCACATGTTGAGGAAGAG
TGGCCGTGGAACTTGGTATATAATTGGATGAAGAAGTTCCATTCGGGTTG
TTTTGTGCACCAGCTACCTTCTCGATTGATTTCTAAATCTCAATGCTAAC
CGAAATATTGACAACCTGTTTTTCAATCTATCGGTTACTTGTCTTTCAGC
GATCGGAGAAAAGGACCTTGTAAGCCTGGTTCCACCTCAGACGTGAGATG
CCTTTTGTTTGCTTGTTTGGTAGTCTGGCGGATCTTTCGTCCATGACCCA
TAGATAGACACTTTAACAACCATACTAACTTGGCGCAGTAACTCCTAATT
CCACACCCTGATGATACTAAGGTCACATTATCAAGCCGGGGCCCGGCCGA
AAATAAAACCATTCATATCAAGAATATACATAACTGATGCTCATGATTAT
TTTTTTGTGTTTTGATGTCTTTTAATAGTTTTATATCATACTTTTCGTTC
CCGCTAACTGCCCGGCTGGGCCCCGGGTTAGGAATTGTTATCTTAGCATT
AGTGAGCGTTAAAGTCTTGTACAATATCCCTATTCGGGGTCACTCAACTG
AAATACATGTATCTTAAAGAATACGAAAAAGGGTTTCGTTCGTTTTCTTT
TTAAACACACAACGATCACAGATCTCTAAGAAACTTAGCGTCAAGTTCAG
CGACAAGTTCGAGTCGACGCCGATGATGCTGGTCGCCCACATGGCGGGGC
ACGACTCCGTGGTGAAGATGTCGCTGCTGCTGGAACATGGTGCCGAGATC
ACGATGAGAGACCGCGATGGTAGAAACGTGCTACATCATGCCATGGAGCA
N Coding sequence (CDS) from alignment at Sc0000228:302760..308310+ >BlTCONS00113332 ID=BlTCONS00113332|Name=BlTCONS00113332|organism=Branchiostoma lanceolatum|type=CDS|length=540bp|location=Sequence derived from alignment at Sc0000228:302760..308310+ (Branchiostoma lanceolatum)
ATGGCGAACCTGACGTCATTTCGAATGTCGTCATTAACGGAGGCACACCC
GGCCAGCATGGCAATAGTAGAAGCTATCCGGAACCGGGATCGGACGGGTT
TGAGGGAGAAATTACGAGAGAACAACGTCCATCAGTTCCGTACAGGCACC
GGAGACACCTTGCTGCACCTGGCCGTCAGGACAGGTGACGTCGAGTTGGT
ACAGATTCTGCTTGACGTTGGACAAATGAACGTGAACGTCCCGGGACAGG
ACCACAGGACAGCCCTTCACATAGCCGTGAACAGTAACGACATAGACATG
GTCAGCGTACTCCTTGACCACAACGCTGATATCGACCTCAAGGATATCTA
CGCGATGTCACCACTGACCCTGGCGGCGTCTCGCCCCCAGTGCTCCGCAG
AACTCTTCAAGCACATGTTGAGGAAGAGTGGCCGTGGAACTTGCGATCGG
AGAAAAGGACCTTGTAAGCCTGGTTCCACCTCAGACGTGAGATGCCTTTT
GTTTGCTTGTTTGGTAGTCTGGCGGATCTTTCGTCCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113332-exon-Sc0000228-1564993656:302760..303208 | BlTCONS00113332-exon-Sc0000228-1564993656:302760..303208 | Branchiostoma lanceolatum | exon |
| BlTCONS00113332-exon-Sc0000228-1564993656:303954..304056 | BlTCONS00113332-exon-Sc0000228-1564993656:303954..304056 | Branchiostoma lanceolatum | exon |
| BlTCONS00113332-exon-Sc0000228-1564993656:305104..305295 | BlTCONS00113332-exon-Sc0000228-1564993656:305104..305295 | Branchiostoma lanceolatum | exon |
| BlTCONS00113332-exon-Sc0000228-1564993656:306786..306893 | BlTCONS00113332-exon-Sc0000228-1564993656:306786..306893 | Branchiostoma lanceolatum | exon |
| BlTCONS00113332-exon-Sc0000228-1564993656:307394..307524 | BlTCONS00113332-exon-Sc0000228-1564993656:307394..307524 | Branchiostoma lanceolatum | exon |
| BlTCONS00113332-exon-Sc0000228-1564993656:307659..308310 | BlTCONS00113332-exon-Sc0000228-1564993656:307659..308310 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000228 | genome | Sc0000228:302760..308310 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055631 |
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