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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000228:182978..188950+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113309 ID=BlTCONS00113309|Name=BlTCONS00113309|organism=Branchiostoma lanceolatum|type=mRNA|length=5973bp|location=Sequence derived from alignment at Sc0000228:182978..188950+ (Branchiostoma lanceolatum)
GCATAATGGTGATCAATGGTCCTATGGGCATAGAGTGAAGGACCGTCACA
GAATAGGGACGAAACGTCCACGTGAAGATGTTTGTTTAACTGTTGACTGA
CTGACCGACTGACTGACTGGACAGTGTACCTAGCTATCTTTAGTTGATTG
AAACATTTGGAGAGACTCAGCATTTTCCTTACCTTTCTCTTATATTGCTA
AGTTACCGTTGTCCCGTGAGTTATACCTTGTCGACCTTTGTAACTATGAC
CCTCTGTCGAACAGATTGAAAAGCAACTGTTTAACCTGTCTGTCATTACT
AACATAACATTCAACATGCCATACGCACTGGTCCGGGCGAACTTCGATGT
TCCAGACGAATTTGACCACAAGTTGTCCAAGTTCATGTCGGAGCAGTTTA
AGAAGCACGAAGGAGTGAGTAGCTCATGTAATGTTACAATCTGCGTTCAG
AAAGAAGTTGGTAAAATTGGACTCTGAGCTGCTCTTTGTTGACAAAATGC
TTATGTGATTTTCTATGTGGCTGCCTTAGAAATGTTTTTTTCTTAATTTT
GCACCCTCTTATTCATCGAGGGCTATACACTGTGCGGACAAACAGTTATA
ATTACTGTAACGTTAATGAACACATTTGGAATGGTGCGGGTGCCAAACGT
TTTAGGTATGCCGTCCCTTGGCAAGGTCAGAAACTGCAACACACCAACAA
GGAGTTGAAAAGGGAGTTCTTTAATCTGTAATGTTACTTCCTTATATTTA
ACTAGAAGTAAAACGGTCTCCAAGCAGGAAGGACGTTTTCTAAGTGTCGC
AACCTTGAGTTGAGAGGGCTGGCTTAGTGAAGACCCATGCGAAAGTTTGG
CTCTTAGAAAATTAGATTTATTTCATATTTCATTTTCTTTCTTCATAGTT
CTTGTGTGTAGACGTCCAGGTCAACAAGCGGAGCCTTCGAAGTGGAACGA
CTGACAAGTTCGTGTACTGTGACCTGCGCGTGGCTGACACAATGCTGACC
AATGAGAGCGACCGGACCAGATGGTTCAAGGCATTCAGCGACTTCTTCGT
TCAGGAGCTCGATGTGGAACCCCTGAGGTCAGTCTAGTCTCATCACAGAT
TCATAAGAAACGTCCCTGCAGCTCCAGAGCAAGCCGATAGAAGGCCCAAA
CACACAACGCTTCTTCCTTACACATCACAAGCTGTATCTGCCACCAAAAC
ATTAAGGCCATAGCACGTCCAGGTTCTGCTGCAGTGCCAAGGTCACATAC
CAGGGGGTCCAAAATCGACCATGAACTTTGTCTTTCCAACACCTACCCAC
ATATCAAATATCATTGTAATCCATCTAGAGCTTATTGAGTTAAGTTATGC
TGACTACAAAAATCCGGAAACACAAACACACACACAGACACACTCCAAGC
ATGGAGATAATGATGATGTACATGAAGATGAGAGTAGTAGGCATGCTACC
GTCTCGTAAAAGAAGTGAGGAGAGGGGAGTTCGTGGGTAGACTTTTTTCA
TGGTTCAGCTATGGGTCTGGTCACATTCGTCGTACAATCGTCGTGCGGGA
TTGCCAACTGAGGGCATTATTGGGTTAGACGTCGTGCACGTGTAAAACAA
GGGCTGTCTTGGATACTTGTACGTGGTTGATTCTGTCCCTGAAACTCATA
CGATAGGCCAATTTATATACAACTCTATGCAAAAAACGAGACATTGTTTT
ACATTCCTGACACAGAATACTATCATCGTCACCATTACATTGTATACAGT
TTTAGCCATTAAAATTCACATTATTAGATCAATTGTTATTCATGTTATAG
ATAAGTTATTTGAAACTGTTAAATATTAGAAATAGTCGATTGTTATGTAT
CTACAAATTGCCATACATTGTACCCGTTACAATTGTCGCGCAATAAAGTT
CTTCTTCGTCTTCATCAAAATCGCAATAAGACATACGACGAATGTGACCG
CACCACAAGAGACACAAAAGTTGCAAGTGAAATTTGCTGCAAAACGACAC
CTGATCACACGTACATTCTGTCCTTTTAACGTGAAAAAAATCTTGATATT
TCAGTCAGGCTTGGCGTACTTCAGAGTATAACGATGTCTACATATACCAC
ATAGGTCGCCTTATTATGATTAGTCTGATTTCTTCTTGTCTCAGATGCAT
AGTGATGTTTCAACCGACAACTGCAGACTGTGAGGCGATTGAGGGAAAGT
TGGTGACGCAGTGGACCCCTCCCGCCGACTGGTACGGCCTGTAGACCGTA
GTCACGGTGTCGTCTGACTGGTGAAATGTCAAAATGACTGATAGTACAGA
CATTGACATACCTAAATAAAAGATGTGATCTCAATGGCGCGAGAGTCTTA
ACATTGTCACTTAGTGCCATAGTTCTAAGGTTAGCTGACGGTGAAAAGAT
TACAACGAAGATGACCAATTTTTTGCACCATTAATTCGACAGGACACAAC
ACCACACAATACACATGTGATACTGATATTTTAGACTTCAAAACTCTGTC
CAAAACGACATAGTAGATCGTGTACAACAATGCTAGTAGTTTACACAAAG
GGTCCAATTGTTTAGATACTTTCGAGAAGTGCGGCAATGACATCACGGTG
ATCCCAGCCGTCGTTATATTATCTCCACTAAAAATGGAGGCATTTTTTTG
AGTGTGTCTGTGCGTATGTCTGTGTGTGTGTGTTTGTTATGTGTGCGTTT
GTGTTTTTGTATTAACAAAGTTATGGATTGATTGTGATCGGATATTTGGT
ATTCGGGTAGGTGTTGGGAAGACAAAGTTCAAGGTTTGGCCCCTTGGTAT
GCACCATGTGACATTGTTTTACTATAAGAGACGCATGATTTTACCATGAA
CTGGACTTTGTTCTGTCGACCTTTGTATCGTATCCTCAGCCCTCTGTTGA
ACAGCAGACACCCGGTACCCTTGCCCTCCCTCGCTCACTACCCTGGGTAC
AAGATCAGGACCTTGTCACCATGCCGCACGCACTTGTCAGGACCAACTTC
GAAGTTCAGGAAGATTTTGACGGCAAACTTTCCAAGCTCATGTCCGACTT
GTTTAAGGTAGACGAAGAGGTGAGCATGTAGGCTACGAAATGGGCTGGCA
AAAATCTGTTGTACATTTTGAATTCATACATGTGACAAAGGCACTAACAT
TATTTCATCGCTGCAGCTGGCTGCGTTATGTTAGAAAACAAGACCAGGGA
ATGATCCACTTTTGCGAGAAAATGTTTTTCTCCACGATGAGTTTGACTCA
CATAGAATTTGAAAAGCGTTCAACTTAATAGCCAACACCACAGCATCATC
TAGCATTTGTACGAAGTACTGCAGTCTACTTATTGCAAAAGAAAAGAAAC
ATTTTTGTTTAACAGTCACCAACTGCTGCATGGAGATAGAACTGTATTCT
ATCAAAAGAGATACATTACTTTGGATGTTATTCCATCATTGCCCGGTCAT
CAGGGTAAAAATGCTGATGATAAGATCTAGACGCACAGAGCAAACAAAAA
ACAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACA
AACAAACAAACAAACAAACAAACAAACAAACACAAAAGAGCATGTTTGCA
TTTGAATGGGGAAAAAGATAAACTATCCTTATCATTACAATATATACCAC
CACACAGGTGGTCTGTGTCGAAGTCCTGGTGAATAAGCGCATGCTCCGTA
ACGGCAGCCATGAGCGGTACGTGTACTGTGACCTGCGCAGACCGGCTAGC
GTGATGACCACGGACAACAAGGTCACGTGGGCCAAGGTCCTGAGCGATTT
CTTCATGGAGGAACTTCGCGTAGAGCCTTTAAGGTAAATAAGATGGTTTT
AATAATGATAATTATCTTTGTTGCATATTCATTCCAGAGTGCTAAATGCA
CATATGACCACACCGGCACACGGATATAAAATACAAAGCATGAAACACTA
GAATACTACATTCTAACGCTAAACTGTACACTTATCAAACACCGTTTATA
CTATTGTTAATCTATACAACTACATGTAATAGTTTCCAGGCCGGTTTCTT
CTCTTTTTTATATATACGGACACATATCAACTGCATGTTGTCTCCACTAT
ATGTTCATTCGTGCATGATATCAGGTAGTTGAATGTATCCAGCTTTGACA
ATTTCTGACACTTGTTATACCAAGACAGGTCCAAATGTACCGTAAAAAGA
CAACTATTTTCCACCACGAAATGCATATTGATCTAACATATCTTTCTACC
AGCTCTTTCTATTTGATTTCTTCAATTTGACTTTCCCATTAAATGCACTA
ATAAGCATACATACTTTGCTCCAGAGTTTTGCCAATGCCATGTTGATTAA
ATGGATGACATCGAAAGACTTGCAAGGTCCGCATTCTTATAAGCAATGTA
CGTAATGCTATAACTTGCTTTGTGCTTCTTCGAAACCCCGAAAGAGGGCT
CTTTTAAATAATGATTTGGAGACCATTTGATTTTCGGGATATCGCTTTTA
CGTAGTGTAGACAGAGCCATTGTAGCAGAGAGGGAGGGGGAAATTTCTGT
TTCTTACTTCTTTATTTCTTCTTCTCAGGTGCACGCTGTCTTTCCAGCTG
GAACCCCCGAAGACCATATAGCCATCCGGGGAGTTTGGAACAGGAAGATA
GCCATCAACTCTTTCCCCCTTCCACAAACGAATCCGCCTGAACCAATGTT
TATTGTTAAGTTTCCAACTTCCTTAGCACAAATCCAATCGGTAATGTATT
AAAATAACGAAGATTACAAACTCTCTGACTAATAATGATTAGTATGCATG
TTTGTTCAAGTCGGAATTATCTTTAAGTTATCACTTTGTAAAGCCAATGT
ACGTACAGCGAATGGCTTTAACAAAAAATACAAATGACACATTGTTCACC
TTTACTGTTATTCAGTTGGATGATTAACCGAATCTACATAATATCATAAG
TCTTACTGTCACAGCATAAAAAGGAGTTTCGAACTCTTTCACGCAATTAC
TAACAAGGCGATGTCAACGTGTTTCCCAACGAAAGATATATAATAAACCA
AAACCGTATATCTAAAAGTGGCTGCACTTCTTGAGTATAGCCAACGTTCC
AAGACGCTTAAGCCATCCCTCCTTGAGTAGAGTGCTTATCGATCTTAAAC
AGCACTCTAAGATAGCAAATCTCCGCCAAGACAATCAAGTAATGAACGTT
AGTACTTTTCTTCTGTGCACCTGTGAGTCGGAGAGAAACTTATTGGCCAT
TCGAATGAGGAATGCTCTTATTGTGAAAAAGACCATCTGGGAAGAGCTTG
CTTTGAAGCACTTAACCTTAATATCGAATGAATGTGGATTTTCTTATCTG
TGCAGGGAAGTTACCGATATTGAGTGAAGAATGCCACCATAAATCCTGTC
TCCCGTTGTCTATCTTAGGCCATGTTGATTTGATTCTATGGATGACATCC
TCTGGGGATCCAAAACTGATGCGAGTGTGCGAATGTAAAAATAGTTTGAT
TAAAAAAAGGTTGCCTTTATCATGAAATCTACGTGGTCAGGAAGGATGAA
TTGAACTTAACACACAGAGTGCGGTATACCGAAATATAGATTCTTTATTT
TTCTTCGTTCAAAACTTCTTCTTTGACTATGGAATTTACTTTGGCGTTTC
ATGACATTAGTATCCATTTTCTGAAACTTTTTTTGTGCAATTTAAAGGAA
GTATCTTTTTTTACTTTGCAGCTGCTTTTAAAAATTTACTTTATCATCGG
CCATAAACCGCTAAAAACGGCCGAAAATGGATGTACGCGCGGATGTCATT
CATATAATCAAATCGACATGGCCTAACGTGAGACTCAGCGTCCAGCCAAT
TGCAGGGTAGTATACTGATAATCAGATTTAGTTTGTTTTTGAGGAACTCG
TGTGTAACTTATAGCTATCCGACAACTTATCACCTGCCATCAAGTAACCC
GATTAAAGCCCATCCTAGCACTG Coding sequence (CDS) from alignment at Sc0000228:182978..188950+ >BlTCONS00113309 ID=BlTCONS00113309|Name=BlTCONS00113309|organism=Branchiostoma lanceolatum|type=CDS|length=378bp|location=Sequence derived from alignment at Sc0000228:182978..188950+ (Branchiostoma lanceolatum)
ATGCCATACGCACTGGTCCGGGCGAACTTCGATGTTCCAGACGAATTTGA
CCACAAGTTGTCCAAGTTCATGTCGGAGCAGTTTAAGAAGCACGAAGGAT
TCTTGTGTGTAGACGTCCAGGTCAACAAGCGGAGCCTTCGAAGTGGAACG
ACTGACAAGTTCGTGTACTGTGACCTGCGCGTGGCTGACACAATGCTGAC
CAATGAGAGCGACCGGACCAGATGGTTCAAGGCATTCAGCGACTTCTTCG
TTCAGGAGCTCGATGTGGAACCCCTGAGATGCATAGTGATGTTTCAACCG
ACAACTGCAGACTGTGAGGCGATTGAGGGAAAGTTGGTGACGCAGTGGAC
CCCTCCCGCCGACTGGTACGGCCTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113309-exon-Sc0000228-1564993656:182978..183391 | BlTCONS00113309-exon-Sc0000228-1564993656:182978..183391 | Branchiostoma lanceolatum | exon |
| BlTCONS00113309-exon-Sc0000228-1564993656:183876..184054 | BlTCONS00113309-exon-Sc0000228-1564993656:183876..184054 | Branchiostoma lanceolatum | exon |
| BlTCONS00113309-exon-Sc0000228-1564993656:185122..186046 | BlTCONS00113309-exon-Sc0000228-1564993656:185122..186046 | Branchiostoma lanceolatum | exon |
| BlTCONS00113309-exon-Sc0000228-1564993656:186635..186810 | BlTCONS00113309-exon-Sc0000228-1564993656:186635..186810 | Branchiostoma lanceolatum | exon |
| BlTCONS00113309-exon-Sc0000228-1564993656:187556..188950 | BlTCONS00113309-exon-Sc0000228-1564993656:187556..188950 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000228 | genome | Sc0000228:182978..188950 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055614 |
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