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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000228:182816..188950+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113308 ID=BlTCONS00113308|Name=BlTCONS00113308|organism=Branchiostoma lanceolatum|type=mRNA|length=6135bp|location=Sequence derived from alignment at Sc0000228:182816..188950+ (Branchiostoma lanceolatum)
TTGTTCTGTATGACAATCATAGCTCCTGCTCAAAGACCAGGCGCATACCA
ACGTCTACTTTAGACGGACGGAGGCCCACGATGACGGTAGTAGAATTGTC
ACTGCAATGTTCACTTCAACAGCTAGGGGTCCCCACTGTCATGTCAGTTT
GACTGATTTTATGCATAATGGTGATCAATGGTCCTATGGGCATAGAGTGA
AGGACCGTCACAGAATAGGGACGAAACGTCCACGTGAAGATGTTTGTTTA
ACTGTTGACTGACTGACCGACTGACTGACTGGACAGTGTACCTAGCTATC
TTTAGTTGATTGAAACATTTGGAGAGACTCAGCATTTTCCTTACCTTTCT
CTTATATTGCTAAGTTACCGTTGTCCCGTGAGTTATACCTTGTCGACCTT
TGTAACTATGACCCTCTGTCGAACAGATTGAAAAGCAACTGTTTAACCTG
TCTGTCATTACTAACATAACATTCAACATGCCATACGCACTGGTCCGGGC
GAACTTCGATGTTCCAGACGAATTTGACCACAAGTTGTCCAAGTTCATGT
CGGAGCAGTTTAAGAAGCACGAAGGAGTGAGTAGCTCATGTAATGTTACA
ATCTGCGTTCAGAAAGAAGTTGGTAAAATTGGACTCTGAGCTGCTCTTTG
TTGACAAAATGCTTATGTGATTTTCTATGTGGCTGCCTTAGAAATGTTTT
TTTCTTAATTTTGCACCCTCTTATTCATCGAGGGCTATACACTGTGCGGA
CAAACAGTTATAATTACTGTAACGTTAATGAACACATTTGGAATGGTGCG
GGTGCCAAACGTTTTAGGTATGCCGTCCCTTGGCAAGGTCAGAAACTGCA
ACACACCAACAAGGAGTTGAAAAGGGAGTTCTTTAATCTGTAATGTTACT
TCCTTATATTTAACTAGAAGTAAAACGGTCTCCAAGCAGGAAGGACGTTT
TCTAAGTGTCGCAACCTTGAGTTGAGAGGGCTGGCTTAGTGAAGACCCAT
GCGAAAGTTTGGCTCTTAGAAAATTAGATTTATTTCATATTTCATTTTCT
TTCTTCATAGTTCTTGTGTGTAGACGTCCAGGTCAACAAGCGGAGCCTTC
GAAGTGGAACGACTGACAAGTTCGTGTACTGTGACCTGCGCGTGGCTGAC
ACAATGCTGACCAATGAGAGCGACCGGACCAGATGGTTCAAGGCATTCAG
CGACTTCTTCGTTCAGGAGCTCGATGTGGAACCCCTGAGGTCAGTCTAGT
CTCATCACAGATTCATAAGAAACGTCCCTGCAGCTCCAGAGCAAGCCGAT
AGAAGGCCCAAACACACAACGCTTCTTCCTTACACATCACAAGCTGTATC
TGCCACCAAAACATTAAGGCCATAGCACGTCCAGGTTCTGCTGCAGTGCC
AAGGTCACATACCAGGGGGTCCAAAATCGACCATGAACTTTGTCTTTCCA
ACACCTACCCACATATCAAATATCATTGTAATCCATCTAGAGCTTATTGA
GTTAAGTTATGCTGACTACAAAAATCCGGAAACACAAACACACACACAGA
CACACTCCAAGCATGGAGATAATGATGATGTACATGAAGATGAGAGTAGT
AGGCATGCTACCGTCTCGTAAAAGAAGTGAGGAGAGGGGAGTTCGTGGGT
AGACTTTTTTCATGGTTCAGCTATGGGTCTGGTCACATTCGTCGTACAAT
CGTCGTGCGGGATTGCCAACTGAGGGCATTATTGGGTTAGACGTCGTGCA
CGTGTAAAACAAGGGCTGTCTTGGATACTTGTACGTGGTTGATTCTGTCC
CTGAAACTCATACGATAGGCCAATTTATATACAACTCTATGCAAAAAACG
AGACATTGTTTTACATTCCTGACACAGAATACTATCATCGTCACCATTAC
ATTGTATACAGTTTTAGCCATTAAAATTCACATTATTAGATCAATTGTTA
TTCATGTTATAGATAAGTTATTTGAAACTGTTAAATATTAGAAATAGTCG
ATTGTTATGTATCTACAAATTGCCATACATTGTACCCGTTACAATTGTCG
CGCAATAAAGTTCTTCTTCGTCTTCATCAAAATCGCAATAAGACATACGA
CGAATGTGACCGCACCACAAGAGACACAAAAGTTGCAAGTGAAATTTGCT
GCAAAACGACACCTGATCACACGTACATTCTGTCCTTTTAACGTGAAAAA
AATCTTGATATTTCAGTCAGGCTTGGCGTACTTCAGAGTATAACGATGTC
TACATATACCACATAGGTCGCCTTATTATGATTAGTCTGATTTCTTCTTG
TCTCAGATGCATAGTGATGTTTCAACCGACAACTGCAGACTGTGAGGCGA
TTGAGGGAAAGTTGGTGACGCAGTGGACCCCTCCCGCCGACTGGTACGGC
CTGTAGACCGTAGTCACGGTGTCGTCTGACTGGTGAAATGTCAAAATGAC
TGATAGTACAGACATTGACATACCTAAATAAAAGATGTGATCTCAATGGC
GCGAGAGTCTTAACATTGTCACTTAGTGCCATAGTTCTAAGGTTAGCTGA
CGGTGAAAAGATTACAACGAAGATGACCAATTTTTTGCACCATTAATTCG
ACAGGACACAACACCACACAATACACATGTGATACTGATATTTTAGACTT
CAAAACTCTGTCCAAAACGACATAGTAGATCGTGTACAACAATGCTAGTA
GTTTACACAAAGGGTCCAATTGTTTAGATACTTTCGAGAAGTGCGGCAAT
GACATCACGGTGATCCCAGCCGTCGTTATATTATCTCCACTAAAAATGGA
GGCATTTTTTTGAGTGTGTCTGTGCGTATGTCTGTGTGTGTGTGTTTGTT
ATGTGTGCGTTTGTGTTTTTGTATTAACAAAGTTATGGATTGATTGTGAT
CGGATATTTGGTATTCGGGTAGGTGTTGGGAAGACAAAGTTCAAGGTTTG
GCCCCTTGGTATGCACCATGTGACATTGTTTTACTATAAGAGACGCATGA
TTTTACCATGAACTGGACTTTGTTCTGTCGACCTTTGTATCGTATCCTCA
GCCCTCTGTTGAACAGCAGACACCCGGTACCCTTGCCCTCCCTCGCTCAC
TACCCTGGGTACAAGATCAGGACCTTGTCACCATGCCGCACGCACTTGTC
AGGACCAACTTCGAAGTTCAGGAAGATTTTGACGGCAAACTTTCCAAGCT
CATGTCCGACTTGTTTAAGGTAGACGAAGAGGTGAGCATGTAGGCTACGA
AATGGGCTGGCAAAAATCTGTTGTACATTTTGAATTCATACATGTGACAA
AGGCACTAACATTATTTCATCGCTGCAGCTGGCTGCGTTATGTTAGAAAA
CAAGACCAGGGAATGATCCACTTTTGCGAGAAAATGTTTTTCTCCACGAT
GAGTTTGACTCACATAGAATTTGAAAAGCGTTCAACTTAATAGCCAACAC
CACAGCATCATCTAGCATTTGTACGAAGTACTGCAGTCTACTTATTGCAA
AAGAAAAGAAACATTTTTGTTTAACAGTCACCAACTGCTGCATGGAGATA
GAACTGTATTCTATCAAAAGAGATACATTACTTTGGATGTTATTCCATCA
TTGCCCGGTCATCAGGGTAAAAATGCTGATGATAAGATCTAGACGCACAG
AGCAAACAAAAAACAACAAACAAACAAACAAACAAACAAACAAACAAACA
AACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACACAAAAG
AGCATGTTTGCATTTGAATGGGGAAAAAGATAAACTATCCTTATCATTAC
AATATATACCACCACACAGGTGGTCTGTGTCGAAGTCCTGGTGAATAAGC
GCATGCTCCGTAACGGCAGCCATGAGCGGTACGTGTACTGTGACCTGCGC
AGACCGGCTAGCGTGATGACCACGGACAACAAGGTCACGTGGGCCAAGGT
CCTGAGCGATTTCTTCATGGAGGAACTTCGCGTAGAGCCTTTAAGGTAAA
TAAGATGGTTTTAATAATGATAATTATCTTTGTTGCATATTCATTCCAGA
GTGCTAAATGCACATATGACCACACCGGCACACGGATATAAAATACAAAG
CATGAAACACTAGAATACTACATTCTAACGCTAAACTGTACACTTATCAA
ACACCGTTTATACTATTGTTAATCTATACAACTACATGTAATAGTTTCCA
GGCCGGTTTCTTCTCTTTTTTATATATACGGACACATATCAACTGCATGT
TGTCTCCACTATATGTTCATTCGTGCATGATATCAGGTAGTTGAATGTAT
CCAGCTTTGACAATTTCTGACACTTGTTATACCAAGACAGGTCCAAATGT
ACCGTAAAAAGACAACTATTTTCCACCACGAAATGCATATTGATCTAACA
TATCTTTCTACCAGCTCTTTCTATTTGATTTCTTCAATTTGACTTTCCCA
TTAAATGCACTAATAAGCATACATACTTTGCTCCAGAGTTTTGCCAATGC
CATGTTGATTAAATGGATGACATCGAAAGACTTGCAAGGTCCGCATTCTT
ATAAGCAATGTACGTAATGCTATAACTTGCTTTGTGCTTCTTCGAAACCC
CGAAAGAGGGCTCTTTTAAATAATGATTTGGAGACCATTTGATTTTCGGG
ATATCGCTTTTACGTAGTGTAGACAGAGCCATTGTAGCAGAGAGGGAGGG
GGAAATTTCTGTTTCTTACTTCTTTATTTCTTCTTCTCAGGTGCACGCTG
TCTTTCCAGCTGGAACCCCCGAAGACCATATAGCCATCCGGGGAGTTTGG
AACAGGAAGATAGCCATCAACTCTTTCCCCCTTCCACAAACGAATCCGCC
TGAACCAATGTTTATTGTTAAGTTTCCAACTTCCTTAGCACAAATCCAAT
CGGTAATGTATTAAAATAACGAAGATTACAAACTCTCTGACTAATAATGA
TTAGTATGCATGTTTGTTCAAGTCGGAATTATCTTTAAGTTATCACTTTG
TAAAGCCAATGTACGTACAGCGAATGGCTTTAACAAAAAATACAAATGAC
ACATTGTTCACCTTTACTGTTATTCAGTTGGATGATTAACCGAATCTACA
TAATATCATAAGTCTTACTGTCACAGCATAAAAAGGAGTTTCGAACTCTT
TCACGCAATTACTAACAAGGCGATGTCAACGTGTTTCCCAACGAAAGATA
TATAATAAACCAAAACCGTATATCTAAAAGTGGCTGCACTTCTTGAGTAT
AGCCAACGTTCCAAGACGCTTAAGCCATCCCTCCTTGAGTAGAGTGCTTA
TCGATCTTAAACAGCACTCTAAGATAGCAAATCTCCGCCAAGACAATCAA
GTAATGAACGTTAGTACTTTTCTTCTGTGCACCTGTGAGTCGGAGAGAAA
CTTATTGGCCATTCGAATGAGGAATGCTCTTATTGTGAAAAAGACCATCT
GGGAAGAGCTTGCTTTGAAGCACTTAACCTTAATATCGAATGAATGTGGA
TTTTCTTATCTGTGCAGGGAAGTTACCGATATTGAGTGAAGAATGCCACC
ATAAATCCTGTCTCCCGTTGTCTATCTTAGGCCATGTTGATTTGATTCTA
TGGATGACATCCTCTGGGGATCCAAAACTGATGCGAGTGTGCGAATGTAA
AAATAGTTTGATTAAAAAAAGGTTGCCTTTATCATGAAATCTACGTGGTC
AGGAAGGATGAATTGAACTTAACACACAGAGTGCGGTATACCGAAATATA
GATTCTTTATTTTTCTTCGTTCAAAACTTCTTCTTTGACTATGGAATTTA
CTTTGGCGTTTCATGACATTAGTATCCATTTTCTGAAACTTTTTTTGTGC
AATTTAAAGGAAGTATCTTTTTTTACTTTGCAGCTGCTTTTAAAAATTTA
CTTTATCATCGGCCATAAACCGCTAAAAACGGCCGAAAATGGATGTACGC
GCGGATGTCATTCATATAATCAAATCGACATGGCCTAACGTGAGACTCAG
CGTCCAGCCAATTGCAGGGTAGTATACTGATAATCAGATTTAGTTTGTTT
TTGAGGAACTCGTGTGTAACTTATAGCTATCCGACAACTTATCACCTGCC
ATCAAGTAACCCGATTAAAGCCCATCCTAGCACTG Coding sequence (CDS) from alignment at Sc0000228:182816..188950+ >BlTCONS00113308 ID=BlTCONS00113308|Name=BlTCONS00113308|organism=Branchiostoma lanceolatum|type=CDS|length=318bp|location=Sequence derived from alignment at Sc0000228:182816..188950+ (Branchiostoma lanceolatum)
ATGCCGCACGCACTTGTCAGGACCAACTTCGAAGTTCAGGAAGATTTTGA
CGGCAAACTTTCCAAGCTCATGTCCGACTTGTTTAAGGTAGACGAAGAGG
TGGTCTGTGTCGAAGTCCTGGTGAATAAGCGCATGCTCCGTAACGGCAGC
CATGAGCGGTACGTGTACTGTGACCTGCGCAGACCGGCTAGCGTGATGAC
CACGGACAACAAGGTCACGTGGGCCAAGGTCCTGAGCGATTTCTTCATGG
AGGAACTTCGCGTAGAGCCTTTAAGGTGCACGCTGTCTTTCCAGCTGGAA
CCCCCGAAGACCATATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113308-exon-Sc0000228-1564993656:182816..182901 | BlTCONS00113308-exon-Sc0000228-1564993656:182816..182901 | Branchiostoma lanceolatum | exon |
| BlTCONS00113308-exon-Sc0000228-1564993656:183333..183391 | BlTCONS00113308-exon-Sc0000228-1564993656:183333..183391 | Branchiostoma lanceolatum | exon |
| BlTCONS00113308-exon-Sc0000228-1564993656:183876..184054 | BlTCONS00113308-exon-Sc0000228-1564993656:183876..184054 | Branchiostoma lanceolatum | exon |
| BlTCONS00113308-exon-Sc0000228-1564993656:185122..186046 | BlTCONS00113308-exon-Sc0000228-1564993656:185122..186046 | Branchiostoma lanceolatum | exon |
| BlTCONS00113308-exon-Sc0000228-1564993656:186635..186810 | BlTCONS00113308-exon-Sc0000228-1564993656:186635..186810 | Branchiostoma lanceolatum | exon |
| BlTCONS00113308-exon-Sc0000228-1564993656:187556..188950 | BlTCONS00113308-exon-Sc0000228-1564993656:187556..188950 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000228 | genome | Sc0000228:182816..188950 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055614 |
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