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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000228:147531..154139+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113300 ID=BlTCONS00113300|Name=BlTCONS00113300|organism=Branchiostoma lanceolatum|type=mRNA|length=6609bp|location=Sequence derived from alignment at Sc0000228:147531..154139+ (Branchiostoma lanceolatum)
CCAAACGTCGGTAATAGACCTAACCGCTGTGGTAGAGCAGATATGGCGAT
TCTATCGGTTCTACTTGTGTTCGTGCTTCACATCACGGTGGGACTTGTGG
AGGCACAACAGCCATGCTGCACACCGCTACAGTGGCAGGCAACACTGGGG
GTCACATATGGAATGGTACATAAAACCTTACGATCAATACGTGAGTGGGC
AGCACACTGGGAACAATATGTACTTTTCCTTCCATTAACTATTTTTTTTG
CAAGCATGCTCCACCAATGGNCAACCCATTCACACTGCCTACATCTGGGA
CCACGCGACGGTTAGTGAATATGGAGCCAAACCTGTACCAGTGATTACCT
TTGTAACAACCTCAGTTAAACCTGTACTAGTGACCATCTCTGTAATAGGC
ACAGTCAAACCTGTACTAGTGACCACCTCTGTAATAGGCACAGTCAAACC
TGTACTAGTGACCACCTCTGCAATAGGCAGTGTCAACCCTGTACTAGTGG
CGGTGACGTGGCCACTGGTACAGATTTGACTGTGCTTATTACAGAGGTGG
TCTGACCGCCTCTGTAATAAACACAGTCAAATCTGTACTAGTGGCCACCT
CTGCAATAAGCACAGTCAAATCTGTTATAGGGGCCACCTAACGTTAGATA
TGGAAAGAAACAACTATCGGAAAGTCTTCGCAAGATATGCGTTTTCTTTG
CCAGCAAAATGACATTTAACTAGGGTCAACAATTTATCGGCTTGTTCTCA
GGGAGTAATGTGGACCGTCGACCTGACGAGACAAAGCTGCCAGCACAGCG
AGCTGAGTAAAGGTCCTGTGTCCAAGCTGTGCGTTGCGGGTACGTCACAA
CAAATCGTTATTGAACTAAGGCCATATTGCGCCAAAAGTAGTTACTCCTT
TTGGCGTATCTAAATACATGGATGTCTAACCTCCATCGACGTATTTCAAT
ATTGCCTTAAAAGGCCATGTTGATTTGATTATATGGACGACATCCTCTGG
GAACGCCAAAACTGATGCGAGCGTGCGAATGAAAAAAAGCTTCGGCCCAA
ATAAAAAGTTGCCTTTATCATGAAAAACTACGTGGTCAGAAAGGTTGAGC
AAGTGACTAGAAACACAGAGCATGGTATAGCGCATAAAAGATTCTTCATT
TACATTTCTTCACCACATCTTCTTCTTGGAATTAATTTTGTCATATGCAT
TCTACGACATTACTACCGTTTTCCTTTTTTTTTGCAATTGACGGCATATA
TTTGATAATTTCCAGCATTTTACAGTATTGTCGAAAACTTGCTTTTTTGT
GGAAACGGACAAAAATTTATGCACGCGCGGATGTCATCCATATACTGAAA
TAATCCAGTCAACATGGCCCAACAGTTGATTATCACAGAGACGAAAGAAA
AGTTGATGGAGTAGATCGACAAATAATGTAGCCTGGTCCCAGTCTGCACG
GGTCGGCTTGGGTGTGTTTTACGGGCCAAGTCTGCTAAATTGACCCGTTT
CTGTCAGTCTGTCTAAGCTGCCATATAGAGTTTAGCAGCCGTCGTAGTTC
TGCCGCCACTGTAGAGACCAGGAAGGACCTAACTACCCCTCGGGCGGGCT
AATCTGTCTGGGCTGGTGGGCATTACTCCCAGCCCCGCAGAGAAACCGGG
GAGCTTCCGACGGTATGGTTGCCAGGTTACAAATAGTGAGAAAGTCTGGG
ACAAAAGTTTAAACGTTCTGATGTGCTCCTTCCAAGATGACGCCGTCCAT
GTCGCTACCGCACATCTTGGTCCAAGTCAGATGGTCTGCGACATTTTCAA
GTTCAAGTGGCCGGTGGGTGAGGGTACTGCAGCTGCTGTGGCTACTGTGG
CGAGGAAAGGTATGGCATGTCGTGAATTCAGTTAACAGTTTTCTGGAAAT
ATCTTTATTGTGATGATCATGGAAACAAACGTTAACCATTGACCTTACAC
TGTTTTAAAAGACCTTGACCTTGTTGACACATTATAGTTACTAATGTTAA
TGATAAGGATTTGCAGCGTTATTATGGCCGTAAGGAATGTGTAAAATAAC
ACTGTTATTGCAAAATTTCATACGAAATTCCAGATGATTCTGTCACAGTG
GAGTGTATTTCCAGGTTGTACACCGGTGAGGATGTCCATACTGGACGGTA
GCCCAACCAGCGGAGGTATCTTCTTTGACGCCCGGGTTTACAACATGAAG
GAAGGGATACACAACACCAGTCTACTGTCTCCCCCTGAGTACTGCGCCCA
CAGCAACAATGTAATGTCATAATGCCACAATCACTTTAGACGGTCATGGA
AAATAATCTATGTGGTAGTGGGCAGGTGAAAGTTCTCTTGAGTTCATACC
ACTGACTTTTATTTTTGAAGAATTGATCGTGAGATTGTGCTTTGCTATCC
TTGTTACGTTGAATGCCAGTCTTTGTGATTAGAAAATTGCAATTGTTTAC
ATCTAGCCACACTACACAGGCGTATCACATCTGATCCATCTTATAAATCA
AAGGTGTTCAACTTCTTATCAAATTATACCGTTTTATGACAGCAGTGATG
TGGTCGTCTACGAAAACGCTTATCATATATATTTCCTGTCTTACAGACTA
CAGCACACAAGCCACCTCCCTCCTTGGTGAAGCTTTTCTCAAGTCTGTGA
GAGACCATCGACGTCTAGCACGATCAGTCACGGTGAACAGGAATCTTGGT
GTTCTAGGAATGACAATCAGGCAAAGACATAACACAGTGTTTTAATAAAG
ATCAGACCGGAATCCTTTGTACCCATGTCATGTTTCCATTCTTGTTCTTT
TCTGGTCTTAATTGTTGTTTCTCAAATTAATGCTCGTTTCATGTGGATTC
ACGAGGACTTGAATGTTTTCAGATATGACATCACCTTGATAAATTGTTGT
CAGTCTGTTTTTCTTGAGAATTCTCAATTTGAAAGCTAAGACGTCTTTGT
AGGTAAGCGAGTGGTGCCTATCATTCTACAGACAGCCATAATGCTCACAC
TTTGTGATGAGTAACAGAATAATGTATCCATTCCATTTAGGTAACGTCTA
CTAATATAATCCCGACACGTCAGATAAAAACTGTATATCCCCTTCCTTGG
AAAAGTATACCCTGAGTACCAGCCTCCGTAGTGACCGCTGGCTCAAAACA
TTTGGTTAGCAAGCGAAATTTTTTGAGCCAGCGGTCACTACGGAGGCTGG
TACTCAGGCTAGGAAAAGTACGCCGAAAGAGATGCAATCGCCCCATTATA
ACAATGCACTCCTGCATAAGAGACCGTGTTTACGTACCCACACTACCCGA
TGACTTATAACCTTTGTACGGTCAACGAACCAGCTCAATAGGTTTAATCA
GGATATTATATTTATTTTACCGTCGGTGGTTCCAAACGTCGGTAATAGAC
CTAACCGCTGTGGTAGAGCAGATATGGCGATTCTATCGGTTCTACTTGTG
TTCGTGCTTCACATCACGGTGGGACTTGTGGAGGCACAACAGCCATGCTG
CACACCGCTACAGTGGCAGGCAACACTGGGGGTCACATATGGAATGGTAC
ATAAAACCTTACGATCAATACGTGAGTGGGCAGCACACTGGGAACAATAT
GTACTTTTCCTTCCATTAACTATTTTTTTTGCAAGCATGCTCCACCAATG
GTTTACATTCCGGATGTATAACCCTAGAGCTAACCTAACTGATAATAGGG
TATATAGTTTGCTATAACGAAACGGCTTTGGGATGCAGCTCGATATGTTT
CCTTATTTTTCATTCTCTTGTTAGACGCTTNCATGTAACTGATAATAGGG
TATATAGTTTGCTATAACGAAACGGCTTTGGGATGCAGCTCGATATGTTT
CCTTATTTTTCATTCTCTTGTTAGACGCTTTGTGCACGGCTTTGATTTGA
TTAGTAGAAGTTAGAACACATTGAGTTAATCAAGACCCTTCTGAAATTCC
CGGTACTAATAATATCTGTCTAGTAAACAATACGCCTCTTTTTAGATCTT
TAACGTTTTGTTTCCGTACTTTTGGACCTTGGGTTGTCCTCAAAGAGCAA
ACAAAACACTGGCTATAGTCACTGACGTTTTCCATGGCTGATGTGTGCCC
AGGGCTGGATTGACAGTAATACTGCCCAAGCTGTTAGGAACCTAACTGCA
GAGTTTGCCTTCGACTGGAATAAACGCACGGCAGCGATGTGGATGACGGG
AACTCAGTACAGCCCTCTCGTTCCCAAACCACAACCAGTCCACAATGCCT
ACATCTGGGACCACGCAACGGTCAGTGCATATGTTGATAAGTACAATCAA
ACCTGTACTAGGGACCACCTCTGTGGTAAAGCTCAGTCAAACCTGCACTA
GGGACCGCCTCTGTAATGCAGTCAAATCTGTACTAGTGACCATCTCTGCA
CAAGGACACTGTGGCTAGTTTTGCTGATTACTTTTTTCTCATTAATCTAA
GTACCAAGAGCCCCATTTATAATGGCTACTGCGATCATTTTCTCCAAGTA
CCATGGATGGTCGCTTTTTTGAGACAGGTTTGACTGTATGATGTAAGAGT
TTAATAGGTACATGAAGAAAATACTACCGGAAAAACAGTCTTCGTGAGGT
GCGTTTCCTTTGCCAGCAGGGGAAAAATGACATTCACATTTAACTTGGGT
CAACATTTTATCGGCTTGTTCCCAGGGAGTAATGTGGACCATCGACCTGA
CCAGTCAAAGCTGCCAGCACAGCGAGCTGAGTAAAGGTCCTGTGTCCAAG
CTGTGCGTTGCAGGTATGTCACAACAAATCGTCATCATGCTAACAGATTA
TTATCACAGATACGAAAGAAAAGTTGATGGAGCAAACCTGCTCTACAAAT
AGAGGTTGTTGGGAAAAATTGTGACCTTTTTGTGATATGCCCCGTTTTTG
CTCACCCTCGTCGTTGGGCGGAAAAAGGGGCATATACATGTAGTAAGGTC
ACCATTTCCCCCATCCTCTGCTTGGAGAGTAGAATAGATTTTCAAAAAGT
GAGAAAGACTGGGACAAAAGTGTAAACGTTCTAATGTACTCCTTCCACAG
ATGACGCCGTCCATGTCGNACAAAAGTTTAAACGTTCTAATGTACTCCTT
CCACAGATGACGCCGTCCATGTCGCCACCGCACAACTGGGTCCAAGTCAG
ATGGTCTGCGATATTTTCAAGTTCAAGTGGCCGGTAGGGGAGGGTACCCC
TGCAGCTGCCGCGGCTACTGTGGCGAGGAATGGTACGGCTAAGTCGTAAA
TTTATGCAGTTTTCGCGAGATATGTTTATTTTGATGATTATGGAAGCAAA
CAAGTGACCTTAAACTGTTTTGAAAGAAAATCTGCTTTCAGTGACCTGGA
CATATTATTGCAAGATCTCAAACGAACTTTTAGATGATTATATCACTGTA
CGCACTATTTCCAGGCTGCACGCCGGTAAGGATGTCTATAGTGGACGGTA
GCCCAACCAGCGGCGGTTTCTTCTTTGACGCCCGGGTTTACAACATGAAA
GAAGGCATACACAACACCAGTCTACTGTCTCCCCCTGAGTACTGCACACT
TGACAACAATAAGGTATGATNAGTACTGCACACATGACAACAATAAGGTA
TGATAGACGGTCATGAAAAACTCTATTTGGTAGTGGAGAGGTGAACATTC
TCCTGAGTTCATACCATTGACTTTCAACTTTTAAGAATTGATCGTGATAG
TATTCTTTGCTTATATATATAGATCGTGAGATTGTGCTTTGATTATAAAT
GTGTTAAGATCTACCCACATGAATAAGAGCCTGGTCACATTCATCATACG
ATCGTCGAAAGTGAAAGTGACCGCGAAATAAACAAACGTATCACATCGGA
TTCCATTGTTCAAATCATTGTTCATCTTCTGATCAAACCATACCATTTTA
TGACAGAAATGATATGAAAATTTTTGACAACACTTATCATATCTTTCCTG
TCTTACAGGTTACAGCTCACGAGCCACTTCCACCTTTGGCCAAGCTTTTT
TTTAGTCTTTAAGAGACCGTCGACGTCCAGTACGATCAGTATGGACAGAT
CGGTATCATCAATGGTGTCATATAAATGAAAATCAAGCCAAGTCTTTTTT
TTCGAAGAAGGTTCTGTGATTTGCTGGTAAGCCGGGACAACGTATAACTA
ATTACACAAACTCGAGAAGCTCGAGATGTTCTTTGAAATTTAGTAAGGTT
TACGTTTGGGGCAGTGTACATACAATAAACATTTATCAGCTGTTAGTTGG
AAGAAATACATTGTAATGCATACTGGAATGGCTATATTTCACACTCTTTA
GTTATAAATGATAATATTTGCCAAAGCCTGCTAATGCTGGTTAATATACA
TGTACTGTATCAAGGCGTTAGATGTCGTCCTCCCTACCACAAAATATTCA
TTGCATCACAAGGTCTATTGATAATTTTGTGTGCCTTTGTAGAGTTTGTG
TAGATAAGGCCATATTGATTTGATTAAATGGGTGACATCCTTTGGGCACT
GCAAAATTGATGCAAGCGTGCGAAAAAATAACAGTTGGGCCCAAACAAAA
GTTGCCTTTATTATTATCTACGTCGTCAGGAAGGTTTTACATGTCATTAA
ACTTTTTTG Coding sequence (CDS) from alignment at Sc0000228:147531..154139+ >BlTCONS00113300 ID=BlTCONS00113300|Name=BlTCONS00113300|organism=Branchiostoma lanceolatum|type=CDS|length=750bp|location=Sequence derived from alignment at Sc0000228:147531..154139+ (Branchiostoma lanceolatum)
CCAAACGTCGGTAATAGACCTAACCGCTGTGGTAGAGCAGATATGGCGAT
TCTATCGGTTCTACTTGTGTTCGTGCTTCACATCACGGTGGGACTTGTGG
AGGCACAACAGCCATGCTGCACACCGCTACAGTGGCAGGCAACACTGGGG
GTCACATATGGAATGGGCTGGATTGACAGTAATACTGCCCAAGCTGTTAG
GAACCTAACTGCAGAGTTTGCCTTCGACTGGAATAAACGCACGGCAGCGA
TGTGGATGACGGGAACTCAGTACAGCCCTCTCGTTCCCAAACCACAACCA
GTCCACAATGCCTACATCTGGGACCACGCAACGGGAGTAATGTGGACCAT
CGACCTGACCAGTCAAAGCTGCCAGCACAGCGAGCTGAGTAAAGGTCCTG
TGTCCAAGCTGTGCGTTGCAGATGACGCCGTCCATGTCGCCACCGCACAA
CTGGGTCCAAGTCAGATGGTCTGCGATATTTTCAAGTTCAAGTGGCCGGT
AGGGGAGGGTACCCCTGCAGCTGCCGCGGCTACTGTGGCGAGGAATGGCT
GCACGCCGGTAAGGATGTCTATAGTGGACGGTAGCCCAACCAGCGGCGGT
TTCTTCTTTGACGCCCGGGTTTACAACATGAAAGAAGGCATACACAACAC
CAGTCTACTGTCTCCCCCTGAGTACTGCACACTTGACAACAATAAGGTTA
CAGCTCACGAGCCACTTCCACCTTTGGCCAAGCTTTTTTTTAGTCTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113300-exon-Sc0000228-1564993656:147531..147695 | BlTCONS00113300-exon-Sc0000228-1564993656:147531..147695 | Branchiostoma lanceolatum | exon |
| BlTCONS00113300-exon-Sc0000228-1564993656:151633..151800 | BlTCONS00113300-exon-Sc0000228-1564993656:151633..151800 | Branchiostoma lanceolatum | exon |
| BlTCONS00113300-exon-Sc0000228-1564993656:152206..152293 | BlTCONS00113300-exon-Sc0000228-1564993656:152206..152293 | Branchiostoma lanceolatum | exon |
| BlTCONS00113300-exon-Sc0000228-1564993656:152637..152762 | BlTCONS00113300-exon-Sc0000228-1564993656:152637..152762 | Branchiostoma lanceolatum | exon |
| BlTCONS00113300-exon-Sc0000228-1564993656:152945..153093 | BlTCONS00113300-exon-Sc0000228-1564993656:152945..153093 | Branchiostoma lanceolatum | exon |
| BlTCONS00113300-exon-Sc0000228-1564993656:153489..154139 | BlTCONS00113300-exon-Sc0000228-1564993656:153489..154139 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000228 | genome | Sc0000228:147531..154139 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055611 |
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