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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000228:143417..150332+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113299 ID=BlTCONS00113299|Name=BlTCONS00113299|organism=Branchiostoma lanceolatum|type=mRNA|length=6916bp|location=Sequence derived from alignment at Sc0000228:143417..150332+ (Branchiostoma lanceolatum)
CAAACTACCTCTATATGCACACTCAGCATAGCCTATTTATTTTGCCGTCG
GTGGTTCCAAAAGTCGGTACCCCTAACCGCTGTGGTAGAACAGACATGGC
GATTCTATCGGTTCTACTTGTGTTCGTGCTTCACATTACGGTGGGACTTG
TGGAGGCACAACAGCCATGCTGCACACCGCTACAGTGGCAGGCAACACTG
GGGGTCACATACGGACAGGTGCACAGAACGTTACAGTCAATACGTGGGTG
GGCGGTACTGTGGGAACAATATGTACATTTCCATCCATTCACTACTAAGG
GTCTGGCAAGCCAATGGGTTAGACTCTGGGTGTACAACCCTATAGCTGAC
ACGTAATTGATAAAGGAATACGGTCTGTTATAACGAAACAGCTTTGGGCT
GTACTGCTGCAGTTTGATGTTTCCTTGTCTTCCATTCTCTTGTTAGACTT
TTTGTTCACGACTTTGATCTAATAAGTACTAGTAGAACGCGTACATTTAG
AAATTTCCGGGACTGGTACAATACTAGTAAAAATACGTCTCTTTTTAGGC
CATTTATCGTTTTGTTTCCGTACTTTTGAACTTTGAGTCATCCTCAACAT
GCAAACAAAACATTGGGGATACTCACTGACGTTTTTCATGGCATAGATCA
CGAACTTTGAGTGATTTGACTGGTAAAACATAGAGTCAATCAGGATCCAA
TTGAAATTTCCAAGGGTATGATGTACACCCCTCTTGAAGTTTAAAGTTGA
TAAATGTTTTGTTTCCCTACTTTGATTTTGGACTTTGATTCATCCTCAAC
AAGAAAACGAAAACTGGTGATAGTTAATAACTCACTGGAACAACAAATGT
TTTCCATGTATGTTGTTTACACAGGCCTTTATTGACAGTAATACTGCCCA
AGCAGTTATAAACGTAACTGCAGAGTTCGCCTTCGACTGGAACAAGCGCA
CGACAGCGATGTGGATGACAGGTACTCAGTACAGCCCTCTCGTTCCCAAA
CCTCAACCCATTCACACTGCCTACATCTGGGACCACGCGACGGTTAGTGA
ATATGGAGCCAAACCTGTACCAGTGATTACCTTTGTAACAACCTCAGTTA
AACCTGTACTAGTGACCATCTCTGTAATAGGCACAGTCAAACCTGTACTA
GTGACCACCTCTGTAATAGGCACAGTCAAACCTGTACTAGTGACCACCTC
TGCAATAGGCAGTGTCAACCCTGTACTAGTGGCGGTAACGTGGCCACTGG
TACAGATTTGACTGTGCTTATTACAGAGGTGGTCTGACCGCCTCTGTAAT
AAACACAGTCAAATCTGTACTAGTGACCACCTCTGCAATAAGCACAGTCA
AATCTGTTATAGGGGCCACCTAACGTTAGATATGGAAAGAAACAACTATC
GGAAAGTCTTCGCAAGATATGAGTTTTCTTTGCCAGCAAAATGACATTTA
ACTAGGGTCAACAATTTATCGGCTTGTTCTCAGGGAGTAATGTGGACCAT
CGACCTGACGAGACAAAGCTGCCAGCACAGCGAGCTGAGTAAAGGTCCTG
TGTCCAAGCTGTGCGTTGCGGGTATGTCACAACAAATCGTTATTAAACTA
AGGCCATATTGCGCCGAAAGTAGTTACTCCTTTTGGCGTATCTAAATACC
TGGATGTCTAACCTCCATCGACGTATTTTAATATTGCCTTAAAAGGCCAT
GTTGATTTGATTATATGGACGACATCCTCTGGGAACGCCAAAACTGATGC
GAGCGTGCGAATGAAAAAAAGCTTCGGCCCAAATAAAAAGTTGCCTTTAT
TATGAAAAACTACGTGGTCAGAAAGGTTGAGCAAGTGACTAGAAACACAG
AGCATGGTATAGCGCATAAAAGATTCTTCATTTACATTTCTTCACCACAT
CTTCTTCTTGGAATTAATTTTGTCATATGCATTCTACGACATTACTACCG
TTTTCCTTTTTTTTTGCAATTGACGGCATATATTTGATAATTTCCAGCAT
TTTACAGTATTGTCGAAAACTTGCTTTTTTGTGGAAACGGACAAAAATTT
AATGCACGCGCGGATGTCATCCATATACTGAAATAATCCAGTCAACATGG
CCCAACAGTTGATTATCACAGAGACGAAAGAAAAGTTGATGGAGTAGATC
GACAAATAATGTAGCTTGGTCCCAGTCTGCACGGGTCGGCTTGGGTGTGT
TTTACGGGCCAAGTCTGCTAAATTGACCCGTTTCTGTCAGTCTGTCTAAG
CTGCCATATAGAGTTTAGCAGCCGTCGTAGTTCTGCCGCCACTGTAGAGA
CCAGGAAGGACCTAACTACCCCTCGGGCGGGCTAATCTGTCTGGGCTGGT
GGGCATTACTCCCAGCCCCGCAGAGAAACCGGGGAGCTTCCGACGGTATG
GTTGCCAGGTTACAAATAGTGAGAAAGTCTGGGACAAAAGTTTAAACGTT
CTGATGTGCTCCTTCCAAGATGACGCCGTCCATGTCGCTACCGCACATCT
TGGTCCAAGTCAGATGGTCTGCGACATTTTCAAGTTCAAGTGGCCGGTGG
GTGAGGGTACTGCAGCTGCTGTGGCTACTGTGGCGAGGAAAGGTATGGCA
TGTCGTGAATTCAGTTAACAGTTTTCTGGAAATATCTTTATTGTGATGAT
CATGGAAACAAACGTTAACCATTGACCTTACACTGTTTTAAAAGACCTTG
ACCTTGTTGACACATTATAGTTACTAATGTTAATGATAAGGATTTGCAGC
GTTATTATGGCCGTAAGGAATGTGTAAAATAACACTGTTATTGCAAAATT
TCATACGAAATTCCAGATGATTCTGTCACAGTGGAGTGTATTTCCAGGTT
GTACACCGGTGAGGATGTCCATACTGGACGGTAGCCCAACCAGCGGAGGT
ATCTTCTTTGACGCCCGGGTTTACAACATGAAGGAAGGGATACACAACAC
CAGTCTACTGTCTCCCCCTGAGTACTGCGCCCACAGCAACAATGTAATGT
CATAATGCCACAATCACTTTAGATGGTCATGGAAAATAATCTATGTGGTA
GTGGGCAGGTGAAAGTTCTCTTGAGTTCATACCACTGACTTTTATTTTTG
AAGAATTGATCGTGAGATTGTGCTTTGCTATCCTTGTTACGTTGAATGCC
AGTCTTTGTGATTAGAAAATTGCAATTGTTTACATCTAGCCACACTACAC
AGGCGTATCACATCTGATCCATCTTATAAATCAAAGGTGTTCAACTTCTT
ATCAAATTATACCGTTTTATGACAGCAGTGATGTGGTCGTCTACGAAAAC
GCTTATCATATATATTTCCTGTCTTACAGACTACAGCACACAAGCCACCT
CCCTCCTTGGTGAAGCTTTTCTCAAGTCTGTGAGAGACCATCGACGTCTA
GCACGATCAGTCACGGTGAACAGGAATCTTGGTGTTCTAGGAATGACAAT
CAGGCAAAGACATAACACAGTGTTTTAATAAAGATCAGACCGGAATCCTT
TGTACCCATGTCATGTTTCCATTCTTGTTCTTTTCTGGTCTTAATTGTTG
TTTCTCAAATTAATGCTCGTTTCATGTGGATTCACGAGGACTTGAATGTT
TTCAGATATGACATCACCTTGATAAATTGTTGTCAGTCTGTTTTTCTTGA
GAATTCTCAATTTGAAAGCTAAGACGTCTTTGTAGGTAAGCGAGTGGTGC
CTATCATTCTACAGACAGCCATAATGCTCACACTTTGTGATGAGTAACAG
AATAATGTATCCATTCCATTTAGGTAACGTCTACTAATATAATCCCGACA
CGTCAGATAAAAACTGTATATCCCCTTCCTTGGAAAAGTATAGCCTGAGT
ACCAGCCTCCGTAGTGACCGCTGGCTCAAAACATTTGGTTAGCAAGCGAA
ATTTTTTGAGCCAGCGGTCACTACGGAGGCTGGTACTCAGGCTAGGAAAA
GTACGCCGAAAGAGATGCAATCGCCCCATTATAACAATGCACTCCTGCAT
AAGAGACCGTGTTTACGTACCCACACTACCCGATGACTTATAACCTTTGT
ACGGTCAACGAACCAGCTCAATAGGTTTAATCAGGATATTATATTTATTT
TACCGTCGGTGGTTCCAAACGTCGGTAATAGACCTAACCGCTGTGGTAGA
GCAGATATGGCGATTCTATCGGTTCTACTTGTGTTCGTGCTTCACATCAC
GGTGGGACTTGTGGAGGCACAACAGCCATGCTGCACACCGCTACAGTGGC
AGGCAACACTGGGGGTCACATATGGAATGGTACATAAAACCTTACGATCA
ATACGTGAGTGGGCAGCACACTGGGAACAATATGTACTTTTCCTTCCATT
AACTATTTTTTTTGCAAGCATGCTCCACCAATGGNCAACCCATTCACACT
GCCTACATCTGGGACCACGCGACGGTTAGTGAATATGGAGCCAAACCTGT
ACCAGTGATTACCTTTGTAACAACCTCAGTTAAACCTGTACTAGTGACCA
TCTCTGTAATAGGCACAGTCAAACCTGTACTAGTGACCACCTCTGTAATA
GGCACAGTCAAACCTGTACTAGTGACCACCTCTGCAATAGGCAGTGTCAA
CCCTGTACTAGTGGCGGTGACGTGGCCACTGGTACAGATTTGACTGTGCT
TATTACAGAGGTGGTCTGACCGCCTCTGTAATAAACACAGTCAAATCTGT
ACTAGTGGCCACCTCTGCAATAAGCACAGTCAAATCTGTTATAGGGGCCA
CCTAACGTTAGATATGGAAAGAAACAACTATCGGAAAGTCTTCGCAAGAT
ATGCGTTTTCTTTGCCAGCAAAATGACATTTAACTAGGGTCAACAATTTA
TCGGCTTGTTCTCAGGGAGTAATGTGGACCGTCGACCTGACGAGACAAAG
CTGCCAGCACAGCGAGCTGAGTAAAGGTCCTGTGTCCAAGCTGTGCGTTG
CGGGTACGTCACAACAAATCGTTATTGAACTAAGGCCATATTGCGCCAAA
AGTAGTTACTCCTTTTGGCGTATCTAAATACATGGATGTCTAACCTCCAT
CGACGTATTTCAATATTGCCTTAAAAGGCCATGTTGATTTGATTATATGG
ACGACATCCTCTGGGAACGCCAAAACTGATGCGAGCGTGCGAATGAAAAA
AAGCTTCGGCCCAAATAAAAAGTTGCCTTTATCATGAAAAACTACGTGGT
CAGAAAGGTTGAGCAAGTGACTAGAAACACAGAGCATGGTATAGCGCATA
AAAGATTCTTCATTTACATTTCTTCACCACATCTTCTTCTTGGAATTAAT
TTTGTCATATGCATTCTACGACATTACTACCGTTTTCCTTTTTTTTTGCA
ATTGACGGCATATATTTGATAATTTCCAGCATTTTACAGTATTGTCGAAA
ACTTGCTTTTTTGTGGAAACGGACAAAAATTTATGCACGCGCGGATGTCA
TCCATATACTGAAATAATCCAGTCAACATGGCCCAACAGTTGATTATCAC
AGAGACGAAAGAAAAGTTGATGGAGTAGATCGACAAATAATGTAGCCTGG
TCCCAGTCTGCACGGGTCGGCTTGGGTGTGTTTTACGGGCCAAGTCTGCT
AAATTGACCCGTTTCTGTCAGTCTGTCTAAGCTGCCATATAGAGTTTAGC
AGCCGTCGTAGTTCTGCCGCCACTGTAGAGACCAGGAAGGACCTAACTAC
CCCTCGGGCGGGCTAATCTGTCTGGGCTGGTGGGCATTACTCCCAGCCCC
GCAGAGAAACCGGGGAGCTTCCGACGGTATGGTTGCCAGGTTACAAATAG
TGAGAAAGTCTGGGACAAAAGTTTAAACGTTCTGATGTGCTCCTTCCAAG
ATGACGCCGTCCATGTCGCTACCGCACATCTTGGTCCAAGTCAGATGGTC
TGCGACATTTTCAAGTTCAAGTGGCCGGTGGGTGAGGGTACTGCAGCTGC
TGTGGCTACTGTGGCGAGGAAAGGTATGGCATGTCGTGAATTCAGTTAAC
AGTTTTCTGGAAATATCTTTATTGTGATGATCATGGAAACAAACGTTAAC
CATTGACCTTACACTGTTTTAAAAGACCTTGACCTTGTTGACACATTATA
GTTACTAATGTTAATGATAAGGATTTGCAGCGTTATTATGGCCGTAAGGA
ATGTGTAAAATAACACTGTTATTGCAAAATTTCATACGAAATTCCAGATG
ATTCTGTCACAGTGGAGTGTATTTCCAGGTTGTACACCGGTGAGGATGTC
CATACTGGACGGTAGCCCAACCAGCGGAGGTATCTTCTTTGACGCCCGGG
TTTACAACATGAAGGAAGGGATACACAACACCAGTCTACTGTCTCCCCCT
GAGTACTGCGCCCACAGCAACAATGTAATGTCATAATGCCACAATCACTT
TAGACGGTCATGGAAAATAATCTATGTGGTAGTGGGCAGGTGAAAGTTCT
CTTGAGTTCATACCACTGACTTTTATTTTTGAAGAATTGATCGTGAGATT
GTGCTTTGCTATCCTTGTTACGTTGAATGCCAGTCTTTGTGATTAGAAAA
TTGCAATTGTTTACATCTAGCCACACTACACAGGCGTATCACATCTGATC
CATCTTATAAATCAAAGGTGTTCAACTTCTTATCAAATTATACCGTTTTA
TGACAGCAGTGATGTGGTCGTCTACGAAAACGCTTATCATATATATTTCC
TGTCTTACAGACTACAGCACACAAGCCACCTCCCTCCTTGGTGAAGCTTT
TCTCAAGTCTGTGAGAGACCATCGACGTCTAGCACGATCAGTCACGGTGA
ACAGGAATCTTGGTGTTCTAGGAATGACAATCAGGCAAAGACATAACACA
GTGTTTTAATAAAGATCAGACCGGAATCCTTTGTACCCATGTCATGTTTC
CATTCTTGTTCTTTTC Coding sequence (CDS) from alignment at Sc0000228:143417..150332+ >BlTCONS00113299 ID=BlTCONS00113299|Name=BlTCONS00113299|organism=Branchiostoma lanceolatum|type=CDS|length=795bp|location=Sequence derived from alignment at Sc0000228:143417..150332+ (Branchiostoma lanceolatum)
AACTACCTCTATATGCACACTCAGCATAGCCTATTTATTTTGCCGTCGGT
GGTTCCAAAAGTCGGTACCCCTAACCGCTGTGGTAGAACAGACATGGCGA
TTCTATCGGTTCTACTTGTGTTCGTGCTTCACATTACGGTGGGACTTGTG
GAGGCACAACAGCCATGCTGCACACCGCTACAGTGGCAGGCAACACTGGG
GGTCACATACGGACAGGCCTTTATTGACAGTAATACTGCCCAAGCAGTTA
TAAACGTAACTGCAGAGTTCGCCTTCGACTGGAACAAGCGCACGACAGCG
ATGTGGATGACAGGTACTCAGTACAGCCCTCTCGTTCCCAAACCTCAACC
CATTCACACTGCCTACATCTGGGACCACGCGACGGGAGTAATGTGGACCA
TCGACCTGACGAGACAAAGCTGCCAGCACAGCGAGCTGAGTAAAGGTCCT
GTGTCCAAGCTGTGCGTTGCGGATGACGCCGTCCATGTCGCTACCGCACA
TCTTGGTCCAAGTCAGATGGTCTGCGACATTTTCAAGTTCAAGTGGCCGG
TGGGTGAGGGTACTGCAGCTGCTGTGGCTACTGTGGCGAGGAAAGGTTGT
ACACCGGTGAGGATGTCCATACTGGACGGTAGCCCAACCAGCGGAGGTAT
CTTCTTTGACGCCCGGGTTTACAACATGAAGGAAGGGATACACAACACCA
GTCTACTGTCTCCCCCTGAGTACTGCGCCCACAGCAACAATACTACAGCA
CACAAGCCACCTCCCTCCTTGGTGAAGCTTTTCTCAAGTCTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113299-exon-Sc0000228-1564993656:143417..143634 | BlTCONS00113299-exon-Sc0000228-1564993656:143417..143634 | Branchiostoma lanceolatum | exon |
| BlTCONS00113299-exon-Sc0000228-1564993656:144291..144458 | BlTCONS00113299-exon-Sc0000228-1564993656:144291..144458 | Branchiostoma lanceolatum | exon |
| BlTCONS00113299-exon-Sc0000228-1564993656:144900..144987 | BlTCONS00113299-exon-Sc0000228-1564993656:144900..144987 | Branchiostoma lanceolatum | exon |
| BlTCONS00113299-exon-Sc0000228-1564993656:149267..149389 | BlTCONS00113299-exon-Sc0000228-1564993656:149267..149389 | Branchiostoma lanceolatum | exon |
| BlTCONS00113299-exon-Sc0000228-1564993656:149645..149790 | BlTCONS00113299-exon-Sc0000228-1564993656:149645..149790 | Branchiostoma lanceolatum | exon |
| BlTCONS00113299-exon-Sc0000228-1564993656:150127..150332 | BlTCONS00113299-exon-Sc0000228-1564993656:150127..150332 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000228 | genome | Sc0000228:143417..150332 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055611 |
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