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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000228:108491..111849+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113293 ID=BlTCONS00113293|Name=BlTCONS00113293|organism=Branchiostoma lanceolatum|type=mRNA|length=3359bp|location=Sequence derived from alignment at Sc0000228:108491..111849+ (Branchiostoma lanceolatum)
CTGCAATTCTGCACAGCACCTCTGTCCGACCGGGAAGGCAACATCCGAGG
CCCTGCTGGCGGTGGGAGAGGCTATCGGCCGCACCACGGTGGAGTATGAC
GCCATAAGGCAGATCGTGGTGGAGATGAAGGGCGGGACCTGCCCCTCCAG
CGCTGATGACATGGAAGCGGGTGTGGACGGCAGTAAGTCTTCAGTCACTA
TCTGCATTGCACAATTTCCCTCGAAAACAGCGTTTGAAGGCCTAAATCCG
TAAATGACGGGGTTGAAGTATTCTCCAAGCAGAGGATTCGGTCGACAGGG
CTAGGAGTGGCCGCAATTTTTAACGAGGGGGAGAAACAACTCCTGCCCTC
TCCGAACCGAAACTTCTGCTTGGAGAAAAGATTTAAGCACAAAACACGCA
TTGGGGGCGCAAACCATTAGCTAAGTACTACATATCGTGCGGTGATAATG
TGATTTTTTTTGCGGCCTTTTTACGTCCACAAAGGAGGTTATGTTATGAC
TGGAGTTGATTTGTTTGCCTACAAGATTTTGACTAGAAGTGATTAGATGG
TTATGGTTTATTTTGAATGGGTCTATTGTACTAGCAGCAAAGCAACAATT
AAACAATAGTGGCCCATTCTCATTAGAAACTTAAGTACAATTTGAATGTT
CATTTGAACAGCCTAGCATTTACTAGCATGGAAGCTTATATATATTTCAA
CGATTATGCTCAGTGCAAGGCCAAAAGATCACTTCTGGGCACTGAACTGA
GTTGGTGGGAGATCGTGATGGGTTAAATATGCTAAGAGATGGCAGTGAAG
GCTGAAGTTCAGCTGTTATGCTTAGGTCACATTTGCACCGGTGCCCGCAG
GGGGTGAAGCCCCGGCCGGGCCCCGAAGCCACAGATTTGTCCCAATGGAC
TGCCGGATACCATGGGGGTACATCTCGGGGATCGCACGATTAGCTCACGG
CTCCAATTTGTTACCGGGTCCCGCGTTGATTTTAACTCCGTGTTAGAAAC
TATCAGGGCCCCGGCCGCGCCCCAAAATAGTCTGGTAGCCACAGGGTGCC
CCATAGGGCCACGTAGGGATAACGACCGATAGTGCAAAAAAGCCCGTGAA
CTGCGGCAGGGCCCCTTTTGCACAATCATTACAGTTGCTATGATCTTACA
TGTTCTTGTTCTGATTTGGAACAGAGGAAACTGCACAAGTTGTGCCGCCG
CTGGACTGCGGTGACTTGAAGAGGGTGGTGCAGCTGTACATAGACTCATT
CACCAGCCAGCTACCGGAGGTGGGCAAAACCGTGGAGGACAGCCTGCTGG
AAATGCTACCTGAGGAAGGTCAGTGTCATTATTACCTGGACTGTACGTAG
TGTCGTGACATGCTTAGAACTATTTTAATAATAGTATTGGTTGTAACCTC
CTTTAACATTAATCCACCGGTTACATAAATCCGCAACTTTGAAAAACAGT
GCTTTGAGAGATCTCTAGTGCAACACCCCCAGGTGTGCACAGTTTAGATA
ATGAATGAATGAAGACCTTTATTGTACATTCGTGCCCCGAGGGGCAAGAT
ACAGGTCGTCTTACATAAACCTAACTAACATATAAGTGACATAGTACAGT
GAAATATATACAGTACGTAGTTACAATATACAGGAGTTGCGCTCATGTCA
TCCATAAGATTTACTTGCTGTGGCCTAACTCGGCTTTGCATGTCCATGTA
TCTTTTCTCACAGAATGGTGCACCGGCTTGGAAATCGGTTCCACCTGCTA
CTTCCTCACGGGCGCTCAACTGCCGTTCAATCTTGGGTCAGCGAATTGCC
AGTCTCACGGCGGCGAAATGGTCATGCTGAAGGATCCCCAGAACTACGAT
GCCATCCGGGTAAGTAGTAGTCTTCAGCCTTCAGATGTATGGAACTAGTA
ACTATACCAGACTATTGATGTGGAGTGATAGGTCGTATTTCATTATGTTG
CGCTTTTTAGATTGTATTTATTGCTTTGTTTGTGACATGTAGTCTGTGCA
ATACATAGCTAATTGTCGCCTGTGTTGTTCCACGACTGTGACATTCTATA
CAGAAAGCGCCTTTTCTGAGAGTTGGATTTTGGTTTCGGAAGTCTGCTTG
TGTTTGTTCTGTTTGATCCTGTTTGGAAGTCGTGAATCTCAGGCTGGAAT
GTGGTTTTGTTGTACAGTTTTCCCGTTGTTATTTTTAGTGTAAAGAAAGC
AATATTCTGTGTTCTCCAGGCGTTCCTGTTGACCTTGTCAGTGGGTGACA
TCTGGATCGGGGCGACTGACAATGACGGGGACATGACCTTCACCTGGATC
GACGGTACAACCATGGTCAACGGGGATTTTGCATCTGGTGAGGATTGAGT
TTTTTTCTTTTTATCTTCCTCATCAACAGTGCGTCGTGTTCAGAGAAAAA
ATGACTGACCAGTGTCTAAAAAATTTCTATTTATGCTTTTGTATTTATGC
CTTTGTATTTATCTTTGTACCATGTTGTGGCGTCAAAACAAGTTCTGTAA
ACTTGAATGTGTCTTATACTTATGTCATGATCTCAATAAAATCTCAATAA
AACCTCCCAAAACAACGAAGTAGCGCTAAGAATCGCTTTACTTTACTTCT
ATTCAAGCCGATGATTTCTCTACTTTTAAGCCATCTTTGTTGGTAATAAA
GCTACTTTGTAAGGAGCAGAAACCCCTTCGTTTAATTCAGAATGCGTGAC
CAGTATTGACCGGTGAAATGCTCAAGTGAGTAGAGTGCTCTGTAGGTGGT
GAGTTTGATCCCCGACCGAGTCATACCAAAGACTTTAAGAATGATACATA
TTACTTTCCCTGCTTAGCACTCATCATTTGGGAAAGAAGGAGTATAGACT
AGTTGAACACACACCACTACCAGTGGACAAGCCCCCCTCTGTAGTGATTG
CACAAAGTTGTGTGGCCCAAGGGCTACTAGTGAAACGGAGATGGGCAACG
CCCTATGACCATCTGGAACGGGAAAGACTTTGAATATTGTAAACAAAATG
GGAACAGTGGTTCAAATAATAGCTGAAGAGTGCACATATATACATACTAA
GGTGGAAAACTTAAACGTTAGATTATTCCATATTAGGAATTTGTATCTAT
ATAGCCTGTATAACTATATAATGTCCTTGGTATAACCGCCCATCGGCGTA
ACACACCAGTTACGCAGGCGCGCGGCGAAGCACTGCCAGCTGGTTCTATT
ACGCTGAATGACCTGCCATACCTAACCTGTGCACATCTGGTGGTGCTTTT
TGCTAAATTACTTCTCTTTCGACAGGTGAACCCAACAATACTAACCAGAA
GTGCGCTCAGATGTGGAGGTACATGAACCTGAAGTGGGATGATGACTACT
GCTCGAACC Coding sequence (CDS) from alignment at Sc0000228:108491..111849+ >BlTCONS00113293 ID=BlTCONS00113293|Name=BlTCONS00113293|organism=Branchiostoma lanceolatum|type=CDS|length=672bp|location=Sequence derived from alignment at Sc0000228:108491..111849+ (Branchiostoma lanceolatum)
TGCAATTCTGCACAGCACCTCTGTCCGACCGGGAAGGCAACATCCGAGGC
CCTGCTGGCGGTGGGAGAGGCTATCGGCCGCACCACGGTGGAGTATGACG
CCATAAGGCAGATCGTGGTGGAGATGAAGGGCGGGACCTGCCCCTCCAGC
GCTGATGACATGGAAGCGGGTGTGGACGGCAAGGAAACTGCACAAGTTGT
GCCGCCGCTGGACTGCGGTGACTTGAAGAGGGTGGTGCAGCTGTACATAG
ACTCATTCACCAGCCAGCTACCGGAGGTGGGCAAAACCGTGGAGGACAGC
CTGCTGGAAATGCTACCTGAGGAAGAATGGTGCACCGGCTTGGAAATCGG
TTCCACCTGCTACTTCCTCACGGGCGCTCAACTGCCGTTCAATCTTGGGT
CAGCGAATTGCCAGTCTCACGGCGGCGAAATGGTCATGCTGAAGGATCCC
CAGAACTACGATGCCATCCGGGCGTTCCTGTTGACCTTGTCAGTGGGTGA
CATCTGGATCGGGGCGACTGACAATGACGGGGACATGACCTTCACCTGGA
TCGACGGTACAACCATGGTCAACGGGGATTTTGCATCTGGTGAACCCAAC
AATACTAACCAGAAGTGCGCTCAGATGTGGAGGTACATGAACCTGAAGTG
GGATGATGACTACTGCTCGAAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113293-exon-Sc0000228-1564993656:108491..108672 | BlTCONS00113293-exon-Sc0000228-1564993656:108491..108672 | Branchiostoma lanceolatum | exon |
| BlTCONS00113293-exon-Sc0000228-1564993656:109665..109808 | BlTCONS00113293-exon-Sc0000228-1564993656:109665..109808 | Branchiostoma lanceolatum | exon |
| BlTCONS00113293-exon-Sc0000228-1564993656:110204..110349 | BlTCONS00113293-exon-Sc0000228-1564993656:110204..110349 | Branchiostoma lanceolatum | exon |
| BlTCONS00113293-exon-Sc0000228-1564993656:110710..110827 | BlTCONS00113293-exon-Sc0000228-1564993656:110710..110827 | Branchiostoma lanceolatum | exon |
| BlTCONS00113293-exon-Sc0000228-1564993656:111766..111849 | BlTCONS00113293-exon-Sc0000228-1564993656:111766..111849 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000228 | genome | Sc0000228:108491..111849 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055607 |
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