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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000228:104317..107917+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113292 ID=BlTCONS00113292|Name=BlTCONS00113292|organism=Branchiostoma lanceolatum|type=mRNA|length=3601bp|location=Sequence derived from alignment at Sc0000228:104317..107917+ (Branchiostoma lanceolatum)
TGAGATTGGGAGAGGAAGGTTGGTAGGTTAAGTACGACGACGCGCTGACG
ATGAAGAGGGTCTGCACTTGGGTGTTCCTGGTGGCCGCTGTTTTCATCAG
CTCGGCCCTGGCGGCTCCTCTAGCTCTGAAAAGTGTGCAGGAAAAACCGG
CACCGAAGAACGAAAAAGTAGGGCTATGTCTCTTTTATTGTACAGAAAAT
AGAAACGAAGATTGTTCCTACAATGTAAAGAGAAGTGCAGTTGAGAGGTT
ACCGATTGTGTGTAATAAAGTGTAGATTTGAAGTGCCGTAGATAGACGGT
TGTATACTGTGCACACTTTTACCACATTTGAACTGCTTGGATTCGAAAAA
ATTGTTGGTTAAAAAGATGGCTCCATCTTGTCCTGGCATCCCAAAAACGT
TTTCTAAAAGGGTCCTTGGTTTTTCCTGTGTGTATGTTTGATGACATTCG
AACTGTTTGAATTTGAATTTCTGCTTAAAAAGACGACTCCTACTTCCACA
AAGTCCTGGCACTCCAAAAACGTTTTCTAAAACGGTCCCTGCCTTTTCCT
GTGTGTATCTTTGATGACGTTTCAATTCGAATTTTTGCTTAAAAAGACGA
CTCCATCTTCCACAAAAGTCCCGGCATTCCAAAAACGTTTTCTAAAAGGG
TCCTTGGTTTTTTCTGTATGTTTCTTTGATGACATTCGAACTGTTTGAAT
TCGAATAGACGACTCCTACGAAGTCCAGGCATTCCAAAAACGATTTCTAA
AAGGGTTCTTGCTTTTTCATGAGCGTATCTTTACTACATCGTCCTCGTTT
TTCCCCAGGCTACAGCTCCGTCGTGTAAGGACGGCGACGTCGCCGCGGTT
ACCCTGTTCAAAGCTGCTGACATGCAGTCGGAGACTGACAGGCGGCTGAA
GACTCTGCGTGCGGAGAAGGAAGTCCTTCACGCTCAAATCTGCGGCGACT
CGAACGACGTCCATGCCAGTCGCGTGGAAGCTGCCATACGCGAGCACGCC
ACTCTTCTCGGTTTGTAAATGGTTTTCACCGCAGTTTGCTCCTGTTGTAC
CTTTACATGATTTTTAACCTTAACTAATTGAAGTTCAAATATAAGTATCA
AGTATAAGTTTGGATACTACGATCTCGAGTTAGCTGTTGGGTGGTCTGTA
TAGAGCGTTCAGAATACTGGAAACCATTGAAAAAACGCAAACACATGAGG
AAAAAAAAGACATTTTAGCAATTTCGTATCTAACAGTTGTTGCGGTGCCA
CAAACCAGCAAAGTTTATCGTATATTCTTTCACTGACATTTTACAAAACC
GTGGACAAATTAACAAATAAAAAAACGTTTGAATAATGAAAATGAAAAGA
GGACAGACCGAAGGGAATACATTCAAACAGGTGATCTGATAGCGACAACC
CTTCAGTATATAATAAACTGTCAACTAGTCTACGTTCCGTCAAGCAAGTT
CGTTTTATATAAAGGAATGTACTTGTAAACTACAGGCATTACAAGTGTCA
GTGTGTTTTCTCGCATGTTCCTCTCTGGTGGCTGAAAACTACACGGTGGT
CCATGTAGTTGCTATGTGTGTTGAAACAATAATAAACACCCCACAGGCCG
TTGCTCTGTTTGTAAGACGATATGTGACTTTTCAAACTGAACTACTTTGA
TTTGTCATATCTGCCTGATCAGTTGTGCTTCTATGAATGGCACTTTGCTA
CCTCCAGGTTGGTTACTTTTTGTTGTGTGCCTAATTTTCTCACGCCTTTG
CGTTCTAACGCGGTGGGTAATGAGGAAAGGTTAGCTGAGACTCTTGTTTA
CAGTGTCAAAATTACCAGATGCCTAATTGTTAACATTTCTCGTTAGGAAG
AACTTAACGAAGTTACTGGTCATCAGTCGTGTTACTTAAGTTTAGTCATG
CATGACCTAGAAAAACACAAAGTGAATACTATACTCGTGTGCGTATGCAC
GTGTTTCGGATACAGGTACGTATTGTTAGGCTTTCTTTTAGTGGAAATGA
CATTAGGAACTAGTGTATGGGGGAGTTTTACGCAATCCCTACACGGAAAA
GCACCATTCGTATCGGGAAGAGTAGGGATGAGCTGGTGTTCTTGGCTGAA
AACGCGAGCAGCGGCGAGGCCCGACTGTAGCCATGCTTCGTCCTCAGTCT
GAGGTCTGCCGCTCTACCGTTTAGCTCATGTTGATTTGATTATCTAGATG
ACGTACTCTAGGGACCCTAAAACTGATACGAGTGCGTAAACAAAAAAAAG
TTTGGCAAAAAAAAGTTGCCTTCTTTATGAAATCAACGTGGTCAGGGAGG
ACGAACAAAACTGAACTCACAGAGTATTGTATACCGAAGTAAAGGGTTTT
CATTTTTGTTCTTTCCTGAAATGTTCTTTTACAATTTGCAGCATGTATCT
TCTCATCTTGAAGCTGCTTTTTATGATTTACAGTGTGACTGAAACCTTCT
TTTTTTTCGGAAACGGACGAAACTTGATGCGCGCGCGGATGTCATCCATA
TAATCAATCAACACGGCCTTATCAGGAATAACAACAAGATTGGCAACATA
AAAAGATGTTGCCATGGCGACGGTGGTCTCTGTTAACGGTTTCGTTTTTA
GCTCACATGCAAATAAGGGCCTCGCATAAATCATATCAGTCGATCACCTT
CTCTACCAAAATAACACAAGTTGTCCAATGTATGAAAATCTTGTTTTCAC
AAAAAAAGATATCGTACCATTTCCTCATAGATAATGTAAATGAGGCCCTC
TATGCAAGATTTGTGTCTAATAGTGGCCACATTTACTTAACTTCCAAATG
GTGCAAAATGAAATCCCCATCATTTAACACTATGGATTTATAGTATTTTG
TCATTAATTATGCAAATTAAGTATTTATTTGCATAATTGATATCTATCGA
TATTTATCTCTTTCTCAGTTACATACGTCATGTGTTTGAGTGTCCTATAA
TAAAATGCAGCTGATTTATTAATTGTCCTCACTTAAGCTATCTACACAAG
AAAAATTATGATGATCCGTCATCCCATTCTTGCGTTATTCTCTTTCAAAG
TTTGAGTCAAAATCAGCTCCTGCAGTTCCAAAAAAGGCCGCTAGAGGGTC
CAAATCTACAAGACATATTTTCCTAACAAAGAGCTATCCACCACTTAAAA
ATCATGACTATAGTATGTTCAGAAGACGAGATTTGAAAAGTGAAAGTTCC
CCTGCATTACCATAGAAAGTCGCCAGGGGGCCCAAAATCCAATCATTATA
AGGTCTCCCACAGACCTACCCACATACAAAATATGAAGACAATACATCCA
GGCATTCTTGAGTTATCGTCCCATGGACTTTCACATTCCTGTACAATTCC
TAGAATTCTTGCAATCTGCACACAATATAGTAAAAATTTGGCTCGCCCCT
GAGGCGTCGCTAAAAAGTAAATGCTAGCTGACTTCGACGGTTTTGCATGT
AGAAGCCAACAGGAGGCGCTGCGAGCAGGAGCTGACCAGCATCATTCCAT
CCATGACTAAGAGGGTCATCAACGTCAACTTGTTGGAAGCCATCCGCGAG
GCCATGCGCTCAGTCGTCGACGCCCATTTCAGCCCTTCAGAGGATGANTC
G Coding sequence (CDS) from alignment at Sc0000228:104317..107917+ >BlTCONS00113292 ID=BlTCONS00113292|Name=BlTCONS00113292|organism=Branchiostoma lanceolatum|type=CDS|length=468bp|location=Sequence derived from alignment at Sc0000228:104317..107917+ (Branchiostoma lanceolatum)
ATGAAGAGGGTCTGCACTTGGGTGTTCCTGGTGGCCGCTGTTTTCATCAG
CTCGGCCCTGGCGGCTCCTCTAGCTCTGAAAAGTGTGCAGGAAAAACCGG
CACCGAAGAACGAAAAAGCTACAGCTCCGTCGTGTAAGGACGGCGACGTC
GCCGCGGTTACCCTGTTCAAAGCTGCTGACATGCAGTCGGAGACTGACAG
GCGGCTGAAGACTCTGCGTGCGGAGAAGGAAGTCCTTCACGCTCAAATCT
GCGGCGACTCGAACGACGTCCATGCCAGTCGCGTGGAAGCTGCCATACGC
GAGCACGCCACTCTTCTCGAAGCCAACAGGAGGCGCTGCGAGCAGGAGCT
GACCAGCATCATTCCATCCATGACTAAGAGGGTCATCAACGTCAACTTGT
TGGAAGCCATCCGCGAGGCCATGCGCTCAGTCGTCGACGCCCATTTCAGC
CCTTCAGAGGATGANTCG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113292-exon-Sc0000228-1564993656:104317..104483 | BlTCONS00113292-exon-Sc0000228-1564993656:104317..104483 | Branchiostoma lanceolatum | exon |
| BlTCONS00113292-exon-Sc0000228-1564993656:105125..105326 | BlTCONS00113292-exon-Sc0000228-1564993656:105125..105326 | Branchiostoma lanceolatum | exon |
| BlTCONS00113292-exon-Sc0000228-1564993656:107769..107917 | BlTCONS00113292-exon-Sc0000228-1564993656:107769..107917 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000228 | genome | Sc0000228:104317..107917 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055606 |
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