BlTCONS00113275 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00113275
Unique NameBlTCONS00113275
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000227:439157..440267-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00113275 ID=BlTCONS00113275|Name=BlTCONS00113275|organism=Branchiostoma lanceolatum|type=mRNA|length=1111bp|location=Sequence derived from alignment at Sc0000227:439157..440267- (Branchiostoma lanceolatum)
GACAGATTTGTGCTCTTCCATCCAGTCTGCTTCAGATAGGGGTGATATAG GTACGATGCACAGTCTCATGAAAGTAGCTCTCGGGCCGAGGGTCTCCAAG ACGGCACCGTTGAAGTCAAAGGAGGGTGAAGTGTTAACTGACAGATCCAA GCAGCTTGAGAGATGGGTAGAACACTACTCAGAACTGTACTCAGAGGAAA TACCAGAAAAACCCGGACTGGATGAGGTCCTGACAACTCTTCCAGAACTG ACAGAGCTGGACGTGATGCCGGAAGAGAGCGAACTTCTCGAAGCGCTGCA TGCTCTAGCCAGCGGTAAGGCACCGGGAGAGGATGGCATACCTGCAGAAG TCCTGAAGGAGAACAAGGAGGTAATACTGCCACACCTGTACGATCTCCTT TGTCAGTGCTGGGAAGAAGGCAACATTCCTCATGAAATGCGTAATGCCAA GATTGTGACACTTTATAAGAACAAAGGGGACCGAGGAGACTGCAACAGCT TCAGGGGAATCTCATTGCTGAGCATAACTGGGAAGGCCATTGCAAGGATT GTACGCAAGCGCCTACAGACATTAGCAGAGCGTGTGCTCCCGGAGTCTCA GTGTGGGTTCAGAGCTGGACGGTCTACTACGGATATGATATTCACATTAC GACAACTACAGGAGAAGTGTAGAGAGCAGTGTATGCCGCTTTACATCGCC TTCGTAGATTTAACCAAGGCATTGTATACAGTCTGCAGATCTGCCCTCTA CAAAGTACTCATGAGTATTGGATGGCCACCTAAACTTCTGAAACTGGTTA TCTCCTTCCACGAGGACATGGAAGCACGTATACAGTTTGACGGCTCTACC TCTGACAGTTTTGCCATCAGGAACGGAGTCAAGCAGGGGTGCGTGTTGGC ACCAACCCTTTTCAGCATCTACTTTGCAGTTCTCCTTCGCTGTGCCTTCA ATGGAAACCAGGATGGTGTCTATATCCGGTCACGTACGGATGGCTCACTG TTTAACCTGGCTAGACTCAGAGCAAAAACCAAAACTGTTGAGTTGCTGTG TAGAGAACTCCTCTTCGCTGACGATGCAGCACTCACGGCACATGAGGAGG ATACGTTGCAG

Coding sequence (CDS) from alignment at Sc0000227:439157..440267-

>BlTCONS00113275 ID=BlTCONS00113275|Name=BlTCONS00113275|organism=Branchiostoma lanceolatum|type=CDS|length=1110bp|location=Sequence derived from alignment at Sc0000227:439157..440267- (Branchiostoma lanceolatum)
ACAGATTTGTGCTCTTCCATCCAGTCTGCTTCAGATAGGGGTGATATAGG
TACGATGCACAGTCTCATGAAAGTAGCTCTCGGGCCGAGGGTCTCCAAGA
CGGCACCGTTGAAGTCAAAGGAGGGTGAAGTGTTAACTGACAGATCCAAG
CAGCTTGAGAGATGGGTAGAACACTACTCAGAACTGTACTCAGAGGAAAT
ACCAGAAAAACCCGGACTGGATGAGGTCCTGACAACTCTTCCAGAACTGA
CAGAGCTGGACGTGATGCCGGAAGAGAGCGAACTTCTCGAAGCGCTGCAT
GCTCTAGCCAGCGGTAAGGCACCGGGAGAGGATGGCATACCTGCAGAAGT
CCTGAAGGAGAACAAGGAGGTAATACTGCCACACCTGTACGATCTCCTTT
GTCAGTGCTGGGAAGAAGGCAACATTCCTCATGAAATGCGTAATGCCAAG
ATTGTGACACTTTATAAGAACAAAGGGGACCGAGGAGACTGCAACAGCTT
CAGGGGAATCTCATTGCTGAGCATAACTGGGAAGGCCATTGCAAGGATTG
TACGCAAGCGCCTACAGACATTAGCAGAGCGTGTGCTCCCGGAGTCTCAG
TGTGGGTTCAGAGCTGGACGGTCTACTACGGATATGATATTCACATTACG
ACAACTACAGGAGAAGTGTAGAGAGCAGTGTATGCCGCTTTACATCGCCT
TCGTAGATTTAACCAAGGCATTGTATACAGTCTGCAGATCTGCCCTCTAC
AAAGTACTCATGAGTATTGGATGGCCACCTAAACTTCTGAAACTGGTTAT
CTCCTTCCACGAGGACATGGAAGCACGTATACAGTTTGACGGCTCTACCT
CTGACAGTTTTGCCATCAGGAACGGAGTCAAGCAGGGGTGCGTGTTGGCA
CCAACCCTTTTCAGCATCTACTTTGCAGTTCTCCTTCGCTGTGCCTTCAA
TGGAAACCAGGATGGTGTCTATATCCGGTCACGTACGGATGGCTCACTGT
TTAACCTGGCTAGACTCAGAGCAAAAACCAAAACTGTTGAGTTGCTGTGT
AGAGAACTCCTCTTCGCTGACGATGCAGCACTCACGGCACATGAGGAGGA
TACGTTGCAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113275-exon-Sc0000227-1564993656:439157..440267BlTCONS00113275-exon-Sc0000227-1564993656:439157..440267Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113275BlTCONS00113275-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000227genomeSc0000227:439157..440267 -
Properties
Property NameValue
GeneIDBlCUFF055595