BlTCONS00113239 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00113239
Unique NameBlTCONS00113239
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000227:182287..182828-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00113239 ID=BlTCONS00113239|Name=BlTCONS00113239|organism=Branchiostoma lanceolatum|type=mRNA|length=542bp|location=Sequence derived from alignment at Sc0000227:182287..182828- (Branchiostoma lanceolatum)
CAAAGTATTAAACCTGTCAGTCCGAGGATACTGACTGCCACATTCCATGG
CAACCCTGGACTCACAATTACAGTCGTCTACGCACCGACCGAGGCTGCCA
GCCCAGCAGACAAAGATGATTTCTACAGTATGCTTAAAGACCAGCTAGAT
AAGGTGAAGAAGCATAACAAGCACCTTGTTATTGGGGACTTTAATGCCAG
AATAGGACAGGACAGCCATGTATCCCACCCAATAGTCATAGGTCCACACT
GCTTTTACGGGGAGACCAACGACAACGGCGATCGCCTTGTGAACTTGTGC
CAAGAACACAAGCTTCGCCCAGCACAGACAAGATTCCCCCACCCAAGAGG
ACGCCTCTGGACCTGGATGCATCCTGGAGGATCCACCCATCAGCTTGACC
ACATTCTAATTAATGGCAAATGGGTGAACTCGTTAAGGAACTGTAGAGCC
TACAACACGGTAGAGATGGATTCAGACCATCGCATTCTAAGTATACTGCT
CATTACTAGCCTCTGTACATCCAAAGGGAAACCATGCCGAAG

Coding sequence (CDS) from alignment at Sc0000227:182287..182828-

>BlTCONS00113239 ID=BlTCONS00113239|Name=BlTCONS00113239|organism=Branchiostoma lanceolatum|type=CDS|length=540bp|location=Sequence derived from alignment at Sc0000227:182287..182828- (Branchiostoma lanceolatum)
CAAAGTATTAAACCTGTCAGTCCGAGGATACTGACTGCCACATTCCATGG
CAACCCTGGACTCACAATTACAGTCGTCTACGCACCGACCGAGGCTGCCA
GCCCAGCAGACAAAGATGATTTCTACAGTATGCTTAAAGACCAGCTAGAT
AAGGTGAAGAAGCATAACAAGCACCTTGTTATTGGGGACTTTAATGCCAG
AATAGGACAGGACAGCCATGTATCCCACCCAATAGTCATAGGTCCACACT
GCTTTTACGGGGAGACCAACGACAACGGCGATCGCCTTGTGAACTTGTGC
CAAGAACACAAGCTTCGCCCAGCACAGACAAGATTCCCCCACCCAAGAGG
ACGCCTCTGGACCTGGATGCATCCTGGAGGATCCACCCATCAGCTTGACC
ACATTCTAATTAATGGCAAATGGGTGAACTCGTTAAGGAACTGTAGAGCC
TACAACACGGTAGAGATGGATTCAGACCATCGCATTCTAAGTATACTGCT
CATTACTAGCCTCTGTACATCCAAAGGGAAACCATGCCGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113239-exon-Sc0000227-1564993656:182287..182828BlTCONS00113239-exon-Sc0000227-1564993656:182287..182828Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113239BlTCONS00113239-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000227genomeSc0000227:182287..182828 -
Properties
Property NameValue
GeneIDBlCUFF055561