BlTCONS00113214 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00113214
Unique NameBlTCONS00113214
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000227:29238..30241-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00113214 ID=BlTCONS00113214|Name=BlTCONS00113214|organism=Branchiostoma lanceolatum|type=mRNA|length=1004bp|location=Sequence derived from alignment at Sc0000227:29238..30241- (Branchiostoma lanceolatum)
CCGCAGGTTTCTGTAGCTCTGCAATGTTTGTCTTTTTATACTGTTTAAAT CGACTGTCTCTCTGCGAAAGAGCAGTTTTAGTACTTGGAACAGTCCCGTG AAATTTTTCACCGCGAAAAGGCAACCTCGCTGGTCGATGTGTGTGTCATT TCTGTGATTTATGTGGAGCTGAACTTGGGACTGTGACCAGTCGTACAGAA CAATGGCGGGGAGGGGTCTTCTGATGTACACGGCAAGCTTCTTCCACCGA ATCAAGTCGGCGGCACGTCCTGCGGGACCACAGCTGAAGACACACCTACG CGACCTGGGTTTACTACGTCCTCGGGGCCGGTACCGAGGTACCCGTGCTG GGAGGAACTTCCTTCGCAAAATTTCCACCATAGTTGGTCACAGGTATGAG ACGGGGGACATCTTTTCATCTTTGATATGCAAATCTGGGCATTCTCCGCA TGGTGATCGTCGCAACACAAACACTGCAAATCTCATTACCATAGCAACCC AGGAACATCGTCGTCCTAATGACAGTGTCTTGATCCATGTTCATTCCAAA CAACGGACGTGTGCAGCGATCATCCCTGATGTTCCGGATCTGCACCCTAA CAACAAGGACATACCTACGGCGAACTCAGCTGTCCACACATACCCCAGAC TGCGACAGGTAGTACCAGTCCCGACTACAAACTCTAGAACTCAGCTTACG CCACACCAGACTGTTGTACCAAATGTTTTATTGTGTAATGCTCGTTCTCT GGCTAACAAACTCGATGAATTTCACTCTGTACTGTTAAATGAACATGTAG ATGTAGCCGCCGTTTCAGAAACATGGTTTCGCAACGACATACCCCCTGAA TTCAGGTCAGTTGACGGTTACAATATCTTTGTTAAGTCGAGAGAAGGTAG ACGTGGTGGTGGAGTTGCGCTTTATGTAAGAGATAGTATTGCAGCACATC GTCTTATGACAGTTGATGTACCAGATGAACTGGAGTGTTTATGGACTATG ATAC

Coding sequence (CDS) from alignment at Sc0000227:29238..30241-

>BlTCONS00113214 ID=BlTCONS00113214|Name=BlTCONS00113214|organism=Branchiostoma lanceolatum|type=CDS|length=801bp|location=Sequence derived from alignment at Sc0000227:29238..30241- (Branchiostoma lanceolatum)
ATGGCGGGGAGGGGTCTTCTGATGTACACGGCAAGCTTCTTCCACCGAAT
CAAGTCGGCGGCACGTCCTGCGGGACCACAGCTGAAGACACACCTACGCG
ACCTGGGTTTACTACGTCCTCGGGGCCGGTACCGAGGTACCCGTGCTGGG
AGGAACTTCCTTCGCAAAATTTCCACCATAGTTGGTCACAGGTATGAGAC
GGGGGACATCTTTTCATCTTTGATATGCAAATCTGGGCATTCTCCGCATG
GTGATCGTCGCAACACAAACACTGCAAATCTCATTACCATAGCAACCCAG
GAACATCGTCGTCCTAATGACAGTGTCTTGATCCATGTTCATTCCAAACA
ACGGACGTGTGCAGCGATCATCCCTGATGTTCCGGATCTGCACCCTAACA
ACAAGGACATACCTACGGCGAACTCAGCTGTCCACACATACCCCAGACTG
CGACAGGTAGTACCAGTCCCGACTACAAACTCTAGAACTCAGCTTACGCC
ACACCAGACTGTTGTACCAAATGTTTTATTGTGTAATGCTCGTTCTCTGG
CTAACAAACTCGATGAATTTCACTCTGTACTGTTAAATGAACATGTAGAT
GTAGCCGCCGTTTCAGAAACATGGTTTCGCAACGACATACCCCCTGAATT
CAGGTCAGTTGACGGTTACAATATCTTTGTTAAGTCGAGAGAAGGTAGAC
GTGGTGGTGGAGTTGCGCTTTATGTAAGAGATAGTATTGCAGCACATCGT
CTTATGACAGTTGATGTACCAGATGAACTGGAGTGTTTATGGACTATGAT
A
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113214-exon-Sc0000227-1564993656:29238..30241BlTCONS00113214-exon-Sc0000227-1564993656:29238..30241Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113214BlTCONS00113214-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000227genomeSc0000227:29238..30241 -
Properties
Property NameValue
GeneIDBlCUFF055540