BlTCONS00113213 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00113213
Unique NameBlTCONS00113213
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000227:27701..28918-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00113213 ID=BlTCONS00113213|Name=BlTCONS00113213|organism=Branchiostoma lanceolatum|type=mRNA|length=1218bp|location=Sequence derived from alignment at Sc0000227:27701..28918- (Branchiostoma lanceolatum)
TGACGCCAAAGTACCACCGGGTCGAGAACAAGGTCGCAAAACGGGAGATA CGGCCAATGAAAGACTCCGGTATTCGGTCATTCGGCCAATGGATCACCCA GCACCAGTGGAAGGAAGTAACAGAGGCACAGAAAACACAAGACAAAACAT CAGCCTTCTATACAACGTTGAACGAGGCAGTAGCAACACACTTTCCCACT AAAGTACTAAGAACACACCTGCAGGACAAGCCCTGGATTTCCCCAAGAAT AAAGGAAGCAATCAAAAGGCGACAGCGAGCATTCTGCGATCAAAAGTGGA AAACATGGAGGGCACTTTGCAATAAGATCCAGAGGATGATCAAAAGGGCC AGGAATCAATACTACACCAGCAGAGTCCAGAAACTGAAGAAAGACAACCC GAGCGCTTGGTACAAGGAGATAAAGGTTTTAACAGGCACACAGAAAAAAG CCATGACCGTCCAAGCCGAAGGGGTCGATCCAGACAATCATCACGACATG GCAAATTTCATCAACCAGAAATTTACCGACGTAACAACATCACTACCACC CCTCGACCTGTCTAACTTACCAACGTATCTCCCAAGCCGTCCCCCTCCAA CAGTGCAGCCTTGGGATGTGTACTGGAAACTGTGCAAGATCAAAACAACA AAATCTGCAGGCCCTGACGGAATTGACGGTAGGTTGCTCAAGGAATACGC AGTCGAACTGAGTGAACCTATTGCCAACATCTTAAACTCCTCTTTGCTTG AAGGTAGGGTGCCACACGAGTGGAAAGAGGCAGTGGTGGTACCGCTCCCG AAGACTAGTCCACCAGACATCAACCACCTACGACCCGTTTCGCTAACCTC CCTCATCTCAAAAGTATGTGAGGACTTCGTGGCAACTTGGATGCTGCAGG ATACGAAGAACAGTATCTCTCCAAACCAGTTTGGGGGGCTCAAGGGGCGA TCAACAACGCATTGTCTTATCACTTTGGCTAATCAACTCTATGAGGCAGC AGACAAACGAGGAACTTCCAGCACTTGGGTATTGACGGATTTTAGCAAAG CTTTCGACCTAGTGGATCATACAGTAGCAATGAAGCACCTGATCAACCTG GGAGTCAGGCCAGAAATTATCCCCTGGATTGTCAGTTTCCACTCACAACG CTCGCAGAGAACCAGATACCATGGTGCGCTTTCCAAGAAGAAGGAACTCA CGTGCGGGCTCGCTCAAG

Coding sequence (CDS) from alignment at Sc0000227:27701..28918-

>BlTCONS00113213 ID=BlTCONS00113213|Name=BlTCONS00113213|organism=Branchiostoma lanceolatum|type=CDS|length=1215bp|location=Sequence derived from alignment at Sc0000227:27701..28918- (Branchiostoma lanceolatum)
ACGCCAAAGTACCACCGGGTCGAGAACAAGGTCGCAAAACGGGAGATACG
GCCAATGAAAGACTCCGGTATTCGGTCATTCGGCCAATGGATCACCCAGC
ACCAGTGGAAGGAAGTAACAGAGGCACAGAAAACACAAGACAAAACATCA
GCCTTCTATACAACGTTGAACGAGGCAGTAGCAACACACTTTCCCACTAA
AGTACTAAGAACACACCTGCAGGACAAGCCCTGGATTTCCCCAAGAATAA
AGGAAGCAATCAAAAGGCGACAGCGAGCATTCTGCGATCAAAAGTGGAAA
ACATGGAGGGCACTTTGCAATAAGATCCAGAGGATGATCAAAAGGGCCAG
GAATCAATACTACACCAGCAGAGTCCAGAAACTGAAGAAAGACAACCCGA
GCGCTTGGTACAAGGAGATAAAGGTTTTAACAGGCACACAGAAAAAAGCC
ATGACCGTCCAAGCCGAAGGGGTCGATCCAGACAATCATCACGACATGGC
AAATTTCATCAACCAGAAATTTACCGACGTAACAACATCACTACCACCCC
TCGACCTGTCTAACTTACCAACGTATCTCCCAAGCCGTCCCCCTCCAACA
GTGCAGCCTTGGGATGTGTACTGGAAACTGTGCAAGATCAAAACAACAAA
ATCTGCAGGCCCTGACGGAATTGACGGTAGGTTGCTCAAGGAATACGCAG
TCGAACTGAGTGAACCTATTGCCAACATCTTAAACTCCTCTTTGCTTGAA
GGTAGGGTGCCACACGAGTGGAAAGAGGCAGTGGTGGTACCGCTCCCGAA
GACTAGTCCACCAGACATCAACCACCTACGACCCGTTTCGCTAACCTCCC
TCATCTCAAAAGTATGTGAGGACTTCGTGGCAACTTGGATGCTGCAGGAT
ACGAAGAACAGTATCTCTCCAAACCAGTTTGGGGGGCTCAAGGGGCGATC
AACAACGCATTGTCTTATCACTTTGGCTAATCAACTCTATGAGGCAGCAG
ACAAACGAGGAACTTCCAGCACTTGGGTATTGACGGATTTTAGCAAAGCT
TTCGACCTAGTGGATCATACAGTAGCAATGAAGCACCTGATCAACCTGGG
AGTCAGGCCAGAAATTATCCCCTGGATTGTCAGTTTCCACTCACAACGCT
CGCAGAGAACCAGATACCATGGTGCGCTTTCCAAGAAGAAGGAACTCACG
TGCGGGCTCGCTCAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113213-exon-Sc0000227-1564993656:27701..28918BlTCONS00113213-exon-Sc0000227-1564993656:27701..28918Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113213BlTCONS00113213-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000227genomeSc0000227:27701..28918 -
Properties
Property NameValue
GeneIDBlCUFF055539