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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000226:197894..204819+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113014 ID=BlTCONS00113014|Name=BlTCONS00113014|organism=Branchiostoma lanceolatum|type=mRNA|length=6926bp|location=Sequence derived from alignment at Sc0000226:197894..204819+ (Branchiostoma lanceolatum)
AATTCTGAGGAAAATTCAGAAGTTCCCACGTGTCTATTTTTAACACTCGT
TTTATGTTAATGTGTAGTTTGAAAAGCCCTAGTGAGAAGATGCTTTTTTG
ATCAGTCAGCCTAGCGTCCAAAATTTCAACTCTCATCTTCTTGTATTCTC
TCCGTTTCCTTTGTAGACATATATCCGTCATATTTTTACTGTATCCATAC
CCGGTCTTTGTGGATAAAAGAGCAGCAGCTGCTTCGCTTGTGTTGTCATT
GTTACCTCTTCGCTAGATGGTCGCGCTTTACATTTCTCTCAAGTGTGATG
TCGAAGAAAAAGGTTGTTTAGCTCTAATTCAACCAATGAGCGCTAAGCTA
GTAGTATAAAGCAAGACAGTCCTCCTCTCCGGATAGAATGCGTCTTCAGT
TGGTTATCAGACCTAGGAAGAGTGCAGGACAACCGTCTATATCCAGTACT
TCGTCGCCGAAGAGCCGACAGACGTCCAAGATGCGCCCGCTGGTTTCTGT
GCTTGCCTTCTGCCTGGCGTTCCTCGTGGCTGCCGTGATGTGTGCGCCAG
CAGCAGAGGATGATGACGGTAAAGAAGTTCTTCCATTTTTCTTACACAAC
TTTCTTAAGTTTCCTAAGTTATAGAAAGCATAATTGTGCGTGAAACTCTT
CGTCAAGGCAGCACCTTCTGTTTTACTTGCCGAATATTCAAGTAGGAAAC
AGAACGGACTAGGAAAAGCTGTCAAAGAGTCGCAGCAAGTTCCGTCAGAT
GCATGATTATCAACAATTTCCGTTATGGCAGTGAACATCATGTTTTCTTT
TCTTTTCTTATGAAAATATTCAAAAGTTCATTTGGCGAACCAGAACACAT
GTAGCTAGCGTTCTTGCATGGTATTGGCTAACTGTAGGGAGGCGGGCGTA
TTTTTTGGCGAAGCCTCAGGAGCAAACCTAATAGTGTAGTATATGTTTAC
TTTCTGCAGAGCCAGAAGTTCTTCTGGGAGATCCCAGATCCATGGAAACC
CCGGAATTGCCGGACGAGGTGGAAGAAATCATAGTTAGTGAGCGGATCAA
TGAACTGGAGTCCGGAGACATCGACGAGTCTGATCTAGGAGGTCCATGGT
CTGATGCCGAGGATCTCGAGCTCACAAAGAGAGAGGAAACGACTAACGAT
CGTTGAGTCTGGCCTTATGTCTAACTGCTAATGCAGAANCCATGGTCTGA
TGCCGAGAATCTCGAGCTCACAAAGAGAGAGGTAACGACTAACGATCGTT
GAGTCTGGCCTTATGTCTAACTGCTAATGCAGAAGTCTACAGAATTTAGA
GGTCCAGTAAGTATAACGTCTAAAGATGACAGTGTGTTTGCATGTTCATG
CCAGAATGCTTATGGGAAGGATATGGCATAGGAGACATACATGTGATTTA
TGCTGTTGTACCTAGAGCCTGCTCAAGCGCTAGCATTCGCTATGTCTAGA
TAGCTTGGATTTGACTTCTTTTTTTTAAAAGTAGAGACAGACTAAAGGTC
CCAATTTGTAGTCCTTGTGTACAGGTGGTAGCTAAACCTAGTACAGGTTT
GAATGTACATCAATGGCCAGGCAGTCCTTGAGCCCCTATCTCAAGGGACC
CGCGGCACGTTGGCGGCGTCGCTGCGTCCTAGACTGGATTTGTGTTACCA
TTGACTTAGATATTAGAGTATAATGCAAAACGTACAAGTATGACTTAAAA
GACAACAAAGAGTAAAAAGGCTCGTTTTTTATCGATGAAATTCGTTGAGG
GCGCTGTCAAATCGCTGCATGGGTCGCATCGATGTCGCCCGTGTGCCGCG
GGTCAATTGAGAGAGGGGCTTAATATGTAGGATGGCCACTTTTGACAACA
CTGTTAGCCAACCAACACTTAGCAGCGTCCAGGTTTTTTAAAATCTTTTT
TTTTCTTCAAATAACCCAGACCCGGGCTGCAGTCTGTAGGGACAGCTGGA
ACGAGTGCCACTGCCGCCTGTGGGCTGGTATGAACTACTGCGACAGCAGA
AGATACCGCCTGTTCATGACCCACTACTGTGCGGAATCATGTGGCCTATG
TACCGGAGGTAAGTTTACACCAGCACACTCGTGTGTGTGTCCGTGGTGTA
CGTGTGCGTGCACGTGCAAGGTCCTTGGCGACAAGTCAGGGCCGGAGCCG
TTAGTGTAGTAGTACGATTGAGTTGCAAATATTCTAAAACTCGCATTAAT
TCTCCAAATGCAAAAACGTGCCACAAACTCAACTAGTGCTGCTGACTGGT
TTTGTTCCTTACAATTGTAGAGAATACTTGCGAGGACATCCACCCTTCGA
AACGCTTCTGCCCCTACATCAAAAAAAGAGGTGTGACAGGGATGCTAGCT
GAGACTTGCTGCGCCAAGACCTATGGATTCTGCTCCGGTAAGTCACATCT
TCTTGCACTGCAAGAAACCTGATCTTTACGCAAACTTAAAGTAGTCGTAA
GGCATACATTGAGCATACTCTCATTAGAAAATATAACCTTTATGCGTGAT
TTAAGGGGTGCTTGAACATTAGATTTCATGCAGTGGTATCTTTCTGAAGT
TGCAATGAATACATCTATTTTGTGTGCATACTGCCGCTGTGTTGATTACA
TGCTGCTCTGATTTTTGTCGGGAAGCAAATTTCATATTTTTTGTGTGTCT
GTAGAAATTGTAAATAAAGACATATTTTCTTACCAGCTATGCATAACGTA
GACACATCTTCATACCTCAGTGACATCGATCAGGACATGAAATAATAAAT
TTTGTTTCTTTTTTTTTCAGTGGAAGAAGAAGAATCGATTGAAGATGGCG
AACTGACTGGTGAGATAAAATTTCAATTTTTTTCAATCGAAGTAGACACA
ACCATAATAGAAAATCGTATTTTCTATTGTTTCAATAGTTCTTTTTGTCG
TCGCTGTTTCTGTCAGACGGAAACTCATGTTGGCGCAATGTGTGTGTAAA
TATGTAAACATTGTTGTTGTCGTTTACATCTCGTTGGTATTGTTTGCCAC
AGAATTCGAACAAAACTGTTTGGATAACCACAACAAGAAGCGTGAAGCTG
ATGGCGCACCTGAAATGTACTGGTGTAAGGTAAGCACAGAGTGTGTGTGC
GGGGGGGGGGGGGATATATGATCATAAGCGATAGATTGTAATGATATTTG
GTATGTAGGTAGGTCTTGGGAAGACGAAGGTTAGGGTCAATTTTGGACTC
CCTGGCGGCTTTCCTAAATGCTGGAGCAGAACTTTCGGTTTTTGTATATT
TTGTCGTGAACCTGCTACCATCTCTATCTTTCAGTGGCAGATAACATTTG
ATGTCTGAAAGAAATGGTGCAAGTTTGGGCCTCCTAGTTGAATTTGCTAG
TGCAACAATGGCCAACAATACTTTCTACTGAACTGATCAAATATATTAGT
CGAAGGGCCAAGCATAAATATTCGGTTCTACAACTTTCTAAAATGTTACT
CAACTATGACCGATAATTTGACCATTGTTAGCTAAAGCTAAGCCTTGTTC
TTTAGACATACTGAATTGAATGGACCTGACCTTGAAGTCAACAGCCTCTT
CGCTGTATGAAGGTAAAGGGTATTTTCACGGGGAAGCGCCCTGCGTCACG
TTTAAGCTGTTTTACAAAAAAAGGTGTTATTGGCCCATCAACTGTACCAA
AGTGGTGATCAGTACTGGCCATTTCCATACCTGGATTTTACAGGCGGATT
GTTGTATGATAACGTGGATACCTTTCTTTTGTCTAAGGCGTGTGGAGAAG
AAGCCACGAAGTACGCCAAGAAACTGAAGGCCAACTACGACGCGAACCCG
AGAAGTTACCCGCTCAAACACTCTACACAGGCGGAGCGCACCTGGTCCGT
GAACGGGAAGAACGTCGTGTAAGTCTGTTTGTTTTTTCGGCTGGGTTTAC
ACAAGTATTTCCATGCACACTCGGAGTGTGCTCCGAGTGTACGCCAAAAA
TAGTTATTTAAGCAACTGGATAAAAATTTTGAAACAGTCAGACGTTTCAG
ACAGCATCTGCTATCTTTCGTCAATGACTAAGGGAAGATCTGGCAGAACC
AGGTTTTATACCAGAACTGGTTACTCGAACCCAGAACCAGGATTTATGCT
CCGAGTGTACTTGGAAAAGCGTGTGGAAACCGGACCTTTGTTTCGCATAA
CGCTTAAATTTTGGCATGTTATTGAGGTGCTGTTGAAACGTGGCGATTTT
GGGCACCGTAGCAGTATTTCCAGCGTCTGGAGAATTATAGATCGACACCC
CCCATCTTGAGGGTAGTGTAGTACGTACATCCCATAAATATCAAATCAGC
TGACAGTCTTAACCTAATTGAATGGCGGCCTTTGAAAAAAGCTGGGGTCA
ATTTAGCTACGTTCAGCCTTGCTACACTTACTTACTAACTGTCTAATGTT
ACGATAGACAACTACCTGGACATAAATGGAAACAGGTTTTTACGTAAGTT
CTGACTGTAAGGTTTGATCCAAAAACTCCGAGATGGACCCTTACTCTTTT
CGTTAAGTGTGGTGGGTTTCTTTAAACTGCTCGGAATATGGCTCTCCTCA
AACATGAGACCTCCGGCTTCGTAAGTACGTCCACGTCCCTAACCGAAGCT
AGGTACTCATTTCAACATGAGTCAAGTGGGCGGAAATATGTGTTACGTGC
CTTTCCCAACACAGGGGCCTGCCAGATTCGAACCGAGGACCTTCAGATTC
TAAGTCAACAAACAACCTTAATCACAAGACCTTATTGATAACACTATTGT
CGGTGTGTTTTTTCCAGGCACGGAGAGAACCTGTACTGGACCTGGTCATC
TGCGCCGAGCTGTAGTGGGAGCAGCAAGTTCCAAAACGCCATCGAGGCCT
GGTATGACGAGAAGAAGTACTACAAGGCTCTCAGGAGGAGAGGACGCCCC
GTGACCCCTTACGGCGTCCGGTTGTACGGCCACTATACTCAGGTTAGCAA
GGAGTCGTTCTCCACTGTTTCATATTCTTGTCATGCGGGGTCGTGTGGCG
TAACGGCAGGGTGCTTGGCCAAGAACGCAGTGGTCCTGGGTTCGAATTCC
CTGACGCCACCGATGTTGCGCCCTTTGGACAAGCCCTCACTCCACCCAGC
TGTAAAAATGGGTACCTGACTTAAGTTGGGGAGATAAAAGGCGGTGGAAA
GATAACACCCATATAGCCTCAGCTCAAAAAGGCTATGGGACTATCTTTAC
CTTGCCAAGCTTATTTTTCTCACTGCATGTGGCGCTGTTGAAATAAGTTA
TAAAAACTGGAATGCAATGCCACATTGTCCCTGTCTGTCCTAAATAAAAA
TAATGATAATATTCTTGTCATTACATTATTTCAATATTTACTTTGTTTAA
ATTCTGCCACAGAACAGCTGAATTAACGTTGGGTAACATAAATTCGGGAT
TTTTCCGATAATGGTTGACTGAAATCAATCTAGCAGAACAATAAACCATC
CTTTTTTTCTATAATTCTGTCAGTATCATGTACTATCTTTGCACTAATCA
TATATATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGCGGATGTGAC
ATTTTTCTTATAAACCAGCCGACAACCATGTTGTGTAATTCTCCCACGAA
GCCCTCAGACTGTTCCAATAAGGGACGGAGAGTTTTTGACCTCGTCGCCT
TATAATCCATGCTTATCGAAGCTTTTCAGACAGTGTTCTGAATACGTAAG
TCTGTCAGGTTTGCATTTCTAGCGGTATTACTTATGTTGCATCTAGCACA
TATCCCTAAATACCCCGTTTTCGAAAAATCCCGAATTTAAGTACCCCGCG
AATTTATGTTACCCAACGTTACATACTATACGCCAACGTTTGTCATAGGA
ATTCCCGATTGCCCGTCGTTAACAGTCTGCGTTGTCTTCACTGGCGGAGA
AAACCACACTAAAATCACAAGACAGCTGCGACAGTGGGCGACAGAACGTC
CCGTTTTACCGTTATAAGCGCATTCGCGGTTCCGACTACGCATGTGCAGT
GTCAAAGGTGAACGCCCCTGGCTTGATTTGCATAACAACGCCCAGACGGG
TTTTGTTAACGTCTCAGGGGCCTTTACCTTTGACACTGCACATGCGTAGT
CGGAACCGTGAATGGGCTTATTCAGACTTCAGTTTGCGTCTGTTTTGACT
TGTCATCGAAAACGTTTCTTCTTGTTCTTGCATCAGATGGTGTGGAAGGG
ATCTGTGGGCGTCGGCTGCGGAAGGTCGGGCGATGCAGGAAACCACATTC
TCGTCTGCATGTACGAGACAGCCGGCAACAAGCTCTCAACAGTCCTCTTC
AACAAAAATGTGCCGACGTAGACGACACGTCACATCCGACCTGGCGTCAC
ATTCGACCTGACGTCACATCCGGCCCAACGACCTCGACGATATGATGATC
TATGACAAGCAATACGAGTAAAAATGATAGAAATTATATGCGGAAGTAAC
CCTTCGTTATATAGCTCTTTCCCCAATGCTAAGAATTTCCAGGTCACCTA
AATAAGCCTTACTTTTTCTATAAGTTTCAACATACATATTCTAGCACATT
TGCTACAAATTCCCTAGCTGTCGTACTGTATTGCAGTACACATGTGCAAA
AAATTGTCCAATCGCAGTTTGCAATGAGATTTAATCTCCTGACCATTTAA
ACACTTCTCCCGACCATTTAAACTGTTTCTAATGTTATCTCGCTTTTTTT
TCTTTTATCTTCGGGTAATACGCATGCCCAGAGAATTGTGCTGGAAGTGA
CTTTCTTCAAATCTACTACATGTTTATTGTATAATGACTATCGTATCCAA
GACATGAAATAAAATGTGAAATTGCC Coding sequence (CDS) from alignment at Sc0000226:197894..204819+ >BlTCONS00113014 ID=BlTCONS00113014|Name=BlTCONS00113014|organism=Branchiostoma lanceolatum|type=CDS|length=864bp|location=Sequence derived from alignment at Sc0000226:197894..204819+ (Branchiostoma lanceolatum)
ATGCAGAANCCATGGTCTGATGCCGAGAATCTCGAGCTCACAAAGAGAGA
GACCCGGGCTGCAGTCTGTAGGGACAGCTGGAACGAGTGCCACTGCCGCC
TGTGGGCTGGTATGAACTACTGCGACAGCAGAAGATACCGCCTGTTCATG
ACCCACTACTGTGCGGAATCATGTGGCCTATGTACCGGAGAGAATACTTG
CGAGGACATCCACCCTTCGAAACGCTTCTGCCCCTACATCAAAAAAAGAG
GTGTGACAGGGATGCTAGCTGAGACTTGCTGCGCCAAGACCTATGGATTC
TGCTCCGTGGAAGAAGAAGAATCGATTGAAGATGGCGAACTGACTGAATT
CGAACAAAACTGTTTGGATAACCACAACAAGAAGCGTGAAGCTGATGGCG
CACCTGAAATGTACTGGTGTAAGGCGTGTGGAGAAGAAGCCACGAAGTAC
GCCAAGAAACTGAAGGCCAACTACGACGCGAACCCGAGAAGTTACCCGCT
CAAACACTCTACACAGGCGGAGCGCACCTGGTCCGTGAACGGGAAGAACG
TCGTGCACGGAGAGAACCTGTACTGGACCTGGTCATCTGCGCCGAGCTGT
AGTGGGAGCAGCAAGTTCCAAAACGCCATCGAGGCCTGGTATGACGAGAA
GAAGTACTACAAGGCTCTCAGGAGGAGAGGACGCCCCGTGACCCCTTACG
GCGTCCGGTTGTACGGCCACTATACTCAGATGGTGTGGAAGGGATCTGTG
GGCGTCGGCTGCGGAAGGTCGGGCGATGCAGGAAACCACATTCTCGTCTG
CATGTACGAGACAGCCGGCAACAAGCTCTCAACAGTCCTCTTCAACAAAA
ATGTGCCGACGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113014-exon-Sc0000226-1564993656:197894..198461 | BlTCONS00113014-exon-Sc0000226-1564993656:197894..198461 | Branchiostoma lanceolatum | exon |
| BlTCONS00113014-exon-Sc0000226-1564993656:198853..199124 | BlTCONS00113014-exon-Sc0000226-1564993656:198853..199124 | Branchiostoma lanceolatum | exon |
| BlTCONS00113014-exon-Sc0000226-1564993656:199813..199951 | BlTCONS00113014-exon-Sc0000226-1564993656:199813..199951 | Branchiostoma lanceolatum | exon |
| BlTCONS00113014-exon-Sc0000226-1564993656:200164..200280 | BlTCONS00113014-exon-Sc0000226-1564993656:200164..200280 | Branchiostoma lanceolatum | exon |
| BlTCONS00113014-exon-Sc0000226-1564993656:200664..200702 | BlTCONS00113014-exon-Sc0000226-1564993656:200664..200702 | Branchiostoma lanceolatum | exon |
| BlTCONS00113014-exon-Sc0000226-1564993656:200896..200972 | BlTCONS00113014-exon-Sc0000226-1564993656:200896..200972 | Branchiostoma lanceolatum | exon |
| BlTCONS00113014-exon-Sc0000226-1564993656:201631..201761 | BlTCONS00113014-exon-Sc0000226-1564993656:201631..201761 | Branchiostoma lanceolatum | exon |
| BlTCONS00113014-exon-Sc0000226-1564993656:202661..202835 | BlTCONS00113014-exon-Sc0000226-1564993656:202661..202835 | Branchiostoma lanceolatum | exon |
| BlTCONS00113014-exon-Sc0000226-1564993656:204180..204819 | BlTCONS00113014-exon-Sc0000226-1564993656:204180..204819 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000226 | genome | Sc0000226:197894..204819 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055400 |
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