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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000225:266061..274794+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00112911 ID=BlTCONS00112911|Name=BlTCONS00112911|organism=Branchiostoma lanceolatum|type=mRNA|length=8734bp|location=Sequence derived from alignment at Sc0000225:266061..274794+ (Branchiostoma lanceolatum)
GACCCGAAGGAGTATGTGAGGAGAGGATTTATCTATGAAAGATTCTGATG
GCTTTGGTTGGAGTTGTGCCTTACGGGAGTTTGTTTATTGGTAAGTTTCC
TTACTCTGAAATTCAGCACTAAGTACTATATCCGGGTGGGGAGGGGGGCA
TACTTGTTGTAACTTTTGCTTTCTTATGAATCTTTAGGGTAGTCCCTTCA
GTTTAATGAGTATTTGATTTCCAAGGGAGCCATTAAGAAATCATAACGAA
TGCTGGATAACGTCTTACGGGAACCAAGACATCGTCAGGCCTGTAGAATC
CCGGTCTATACTTGACATAACAGGTCACTTAGTAATAGGTGCCGAGTTGT
CCTGAGCTTGGTGCCGAGTCGTCCTGAATGGCTAGGGGCCGAGTTGTTCC
AGGGGCCGAGTTGTCTCGGAATCCATTTAATTGATGGTAAGTTTTTGTAG
TCTGGCGTTTTGACCCAGAATCCCTGGTAATTACATACACATGCACATGC
GGTCCCCCCCCCCACACCCTCACTGCAAAATGGACCATTCCACATATACA
AGACAGTTGAACAGCATGTAAATTGATTGACATGAAATGCTACCAGTTAA
TCCATAGAGCACATTGGGAAGCTCTGGTTCCCATTGCCCCCCCCCCCTTT
TTTGACGCCTTGTCTATAAATCCTAGGTAAAAGCCTGAACATTGCTGACA
ATATCTCCCTTAAACTCTATGTATTACTTACTCACTAAATTCACTTGTCC
TGTCCTTTGCACTCACAATTCAGTTGTTTACGTTCCTTAGCGCCTTTCCT
AATATTTTCCCTAAGTTTTATTTGTACCGGGCACTTGTGTTGTATCTAAC
CCATGCGCAACTGCTGATAATCTCAGATATGAGGCTAAGCAGTAAAGAAG
AAGAAGAACTCTTCCAGGAATGACCAGCAAAACATGCATGTAGTCTCCTC
TCACGGATGTCTTGACAATGATATATGAAGGGTACATCCCCATATAGCCA
GTCCTTTGTGGGATGCTCCCTCTAGGAGATGGATGTTCAAGGCAGCACCT
AACAACTTTTAGAAAAATATATCTCTCTGTATTACTGTATGAAGTAAGGA
AAAATACAGTGTACAACACATAGGGACATCGTGTGGTGTATTATCGGTAG
GGTGCTTTGCCCACAACCGAGAGGTTCCGGGTTCAAAACACTGATATGCC
CCGATGTTGTACCCTTGAGAAAGCCACTTTGCACGACTTTCCTCACTTCA
CTCAGGTGTAAAAGCGTACCTAGCTTTGGTTAGGGACGTCCCTCAGATAG
GACGTTATATGGACTAATTGAAAAGAGTAGGGTCCTTCCCGGTGTGAGTG
GTTCCAAAACCTGAAGTCCTTTGACCGCACATGGGTTCATCCTTAAAGTT
ATAGCCTACGGCTAGTTGGGCAACCCTGGCATGTACATGCTGAACTAATA
AATNTTAAAGTAATACCCTACGGCTAGTTGGGCAACCCTGGCATGTACAT
GCTGAACTAATAAATGAATAAATAGGTAAATAAATGTACAGCTTGTATCA
ATCTATAATGACAAATGCTTGGAATCAATATTTTAGATCTGTTTACTAGT
ATCTGGTTGCTCTGTCTAGATCTTAATCCCTGATTTCTTTAACCTAACAT
AGATGCCTCCTGGCGAGATATCCTGTCCGGCATCAGGGACTGTACTGTCT
CCTCACCAGACCGACAGCTGAACACACGCCGTCTCCAGAAGATATGGACG
ACCGCACAGAACCCAAACCACGTCCTGCCTTGCCTCTCCGTCCGCACCGG
ACTCGACCTGTTTCTTACGGTCAAGAAGTTTCTGCCGGGCTCAGAAATCA
TCATGTCCGCTATCAACATTCCCGACATGGCCCGCGTCGTCAGACATCAC
GGCATACGGGTCATTCCCATAGACGTCCACATAGAGACCCTCTCGCCGAA
AGTCGAACTTCTGGAAGGTCTTATCACAGAAAGAACTGTAGCTGTACTTG
TAGCGCACCTGTATGGGAAGTGGTTTGACATCGTTGAAGTGATTGACATA
GCGAGAAGGCACGGTCTATACGTACTTGAAGACTGCGCCGAGGGCTTCTG
CGGATTTGAGAACATCGGAGATCCACGTTCGGACATTGCGTTCTTTAGTT
TTGGTGTAATCAAGCCCTCAACTGCTTTTGGCGGATCGATTCTGAAAATC
AAAGACAGCAAGCTGTTTGCAGCGATGAACGAAGCTTATTCGGTGTACCC
CACCCAGTCATCGTTGGAGTATTTAAAAAAACTGCTCAAGTATTCGGTCG
CTACGGTTGGTCTGAACTGGCCTTTTCTGACAGGTTACGGCGTCTTTGTC
GTGCAGAATGTTCTAGGCATCGACCACCAGAAGATGTGGATTTCCCTGCT
GAGGGGTTTCCCGGACCAGTTTTTTCAGAAGATCCGTCAGCAGCCGAGTG
CTGGACTGCTGTCTTTGCTGGTCCATAGGTGGGTAGACTTAGTGCTGCAT
ACCTAAACCCTGGACTAGAATCAGACTGGACCTGACATTTAGGTTCAAGT
CCCAAAAAAACCTAAACGTCTGGAAACAAGTCCGGACTTGCAAAATGATA
TCTCTCACTTATATTCTCCTTTTTGTTCTGAACCATCTTAAACCTTCTTT
TGGTCGTGAAATTTCTGCTGGAAAAGACAGACCTGAAACAGAAACTCTGG
ACTTTAATCCGGACCTGAACCTGAAAAAGAATTTAGATATGCAGCACTAC
ATGTATAGACTGTTTAATTCACAACAAAAACAACTTTACTTACATGCCTT
CTGGTATGGGTGGGCTGTTTAATTGCAAGCCCGTTTACCATTTAAAGCAA
GTCGATAAAAGGATTTTTTTTAGGCCTCAGAAAAAATATGTTGTGTTTCT
GATTACGGTCCTGGAATAGATAGGGTTGGTGTGTGGTTTTTATTTTTATT
TCTTGATTTTGACCAAAGTAATTTAACACGTAGAGTTTAAAGGCATCCAG
AGCATTTTATGAGGCTTAAAACTTGAATGAAAAAACTCAAATTTCTAGTC
ATTCCTACAAATAGTAGGTTTCAATAACACTATATATACCATTACATATC
GACATTAAAGGAGCAAAGACACGATGTCGTTGTGTGTTGATAACTGACAA
GAACTGATAGAAAATCCAAGCCCTACAAAATGTAATAGACTGATCCTGAC
TGTCCATCACAATTAGCGGTTAAACCGATGTGAGAGTGACTGCATATCTG
TCAAATATTTGCATTTATATGTTTTAATTTTGCATTTCTACATTTTGGCG
GAGGTGGGCGGTGCTTATGTATGTGTTTATCTACACTACTAGTAGGCGCG
TGAAACTAAAAGATTACCATTTAGCTTATTTTCGTGCCGCTTTTGAATTT
GAGCACTTTTGATAAGAAATTTGCATGCAAATGTCGTTAACAATGGCATT
AAATATCAATTTCATAAAGATTACAGCATCTAGAATATTATCAGTTTTCA
AGCCTCATAAAATGCTCTGGGTGCCTTTAACAATATAAAACAAAAAGTAT
CAGGACAGAGTTATTTTGAACATCATATTGTAAGTAAACAGATACAAATG
GTGCAATGTTTACTGCACATTTGTACATTAGCTTATCAAAGCTCAAATTT
GTTACCAGAGTGTGGAATAAAGTAAATCTGTTTTCAATTTTATCAATCAG
AACTGATTTAAGGTCAGAAATTTTATGTCTCTTGGCAGCAGTCAACCCCA
AAAAAGTCGGGGGATTTAGGGAATGGGTTTTCTGCGCATGGAAATCTTCA
AATGCGTCAGAAAATGTGTAGTACAAAATCCTTAGGCAGATAAATGTGTC
CCTTATTTGTAACCCGTATTTACCTAAAAACACCTGATTTCTAGGCCCCT
TGGGAATAGGTCTCTTGGGAATAGTTGAATTTTTTTTCCCAAGTACATCG
GGTCACCCCTTCTCTTCTCAATAAGTGTGTTGGGTTCTTTTCAAAAAGTA
ATCCATCTGTGTGTTGGGATTTTCAAAACAGTACTGCTTATCATTGTGTT
ATCACCTATTGTAGCCTCATGGGTATTGAAAAGGCTATATTATGGTTCTG
AGCTAAGGGTTTGGTTAACAAATGATTTAAAACTTACATTGACACCTCTG
AATTTGTACACAGATGTATAGGATTCCGCCAGAAGTCGTTTCAAGTCGGA
GTGGATAAAGGACGCCATGCAGACATGCTGCTAAAGAACCCATCCATGAT
GAAAGTAGGCGACAAGGCAGACAACAGGAACTATTGGCTTTTCCCCATAC
TCGTGGTAGGTTGTAGTTCCATACGCTCTTTTTATTTATTCTGTATCTGT
ATAGCCGGTATAACCGCCCTTCCACCATTCCAGCTTCGCAGACACGCTGG
CGCGGTAGCAGCTGGTTATATTACACTGAACGACCTGTCACACCTAACTT
TTGCACATTTGACTGCAACCGTTCCTTAAACTTTTGAACATTAAGTTAAA
ATCCTCCCACACCATAATTGATGTATAGGGCGGTGCCCATCTCCGTTTCA
TAGCCCTGGGGCCACACTGTGGTGCAATCACTGCAGCAGGGGGCTAGTCC
ACTGGCAGTGGAGTGTGTTTAACTTCCATACTGTTTCATAAGTATGTACC
ATTTTTATAAAGTCTTTGGTATGACTCAATGCGCCTCTTGTCCAGAGGTG
CCCTACGTGGGGCTTGAACCCCAGTCCTTCTGGTCCAAGTAATTTGAACC
AGATGTGGCAGAGAAGCAAAGGCGCAGACCACTACACCACAGGGACACCC
CAAACTTTTGAACATGGTTGATGTCAATCACTACGTCAATACAAAACAAC
AACGAACTCTCAGACAAACCGCTAATAAAACCATGCATGCATCTACCCAA
GAATCTTGGTCACATGGTTAATTACCTAATGTAACGATTGTGTCACCACG
ATTTAAAAGTGCCCGAACATGGCAGTGCCACTGATTGGTGAGAGAGCGAA
AATTGCATGCACATCAAAGCTATACACACTGATGTAGCAGTGTAGGACTA
TGGGAGAAATTAGTTACGGGTGCACGTATATTCACCAACAGAAAATGGTG
AATTTAAATCTTTCCTACGCTTTCCATTAACCATTAATAATTTTAAAAAT
ATAAAATAAAATTTAAAAAAGATGTTTAAAAAGCATATCCACTTTGAAGC
CTGTACCATGTGCATCTATTTGTTTAACTTTGGTCAAATGCTACAGAATG
CCATGTGTTAACCACATATTACCACATATTTTGAAATAATAGATACTGTA
AAATGCAGAAATGTTCGCGGTGGTTTTATGTTCGTGGTTCACTCCGGTTA
ACATTTTACCACAAACTTGAAAACCACCGCAAAAAGCCTTTCCTTGTGAC
TGTAGCCCTACCATTTTTTTCAAACGTTAATACTCCATTTTCTCTCTACT
GCGAAATTCAATCCCTGCAAACATTTCTGCATTTACAGTAAAATGATATC
AGTATCATTATTAATGTTTTGCAGGAGAAGCCTGATGAAGTTATCGACTC
GCTCTGTAAGAAGGGAATCAACGCGTACCGCGGCGCCACGCAGCTCAACG
TCATCGAACCTCACACAGACACGTCGCACCAGCTCAGTGAACAACTCACA
CACTACCCAGAAGAAGCCAGGTTCATCATCGACCATGTTGTGTACTTGCC
TATCCACAAACGGGTTCCCTACTACTACATTGAAAGGGTTTGTAAAGGTT
TAGAGGAGGTGCTGCAAAAACATGGTACTGTCTTTCAGAAGCCCTGCTTT
GAACGTCCCCTTGTTGTGTTGAATGGGAAACCTGCACCAAAACTGCCTTC
CAAACTTTGAAACACTACATAGAAGTTTTTTAATATAACTCTTAGGCCAT
GTTGATTTGATTATATGGATGACATCTGTGCGCGCATCAATTTCTGTCCA
GTTTTAAAAAAAAAACAGTTTTTGGCCATACTGTTAATTATACAAAGCAG
CTGCAAAATGAAGAAATAAATGCCCTAAATTACCATGAAAAAATATTTTA
AAAACATGGATACTAATGTCATAGAATGCTAAAGTCAACTCCATAGTCAC
AGAAGAAGATGTGAAAGAACAAAAGTCACTCACTCACTCACTCATGACCC
ATGACCTCAGTGGTCGTAGGGGCGTCAAAAGTCAAAAATCTATTATTCAG
TATACAATTATACTGTCTGTTTTGTCATTTGTTCAACCTTCCTTTGATTT
TGTGATAAAAGCAAGCTTTTTCTGCGAAGCTTTTTTTATTTGTACGCTCA
CATCTGTTTTGAGGTCCACAGAAGATGTCATCCATGTAATCAAATCAACC
TGGTGTAACTTTGAGTTAATGATTATAGGTGCTGATTTCAGTCGTTTGAC
TTCTTTTAGACATTTTGTACTGATTAGACTTGACACAAGGCAACACTATT
ACTTGTCTTGATCTTATTTTATCACTACCATCTTCATTATTTTCTTTTTT
TAAGAAGTATTACAGCCAACATTACCAATCAAGAGTAAAGGTGTTTTTTT
TTTAATTTTTTAAAGGCCTTGGAAAATAAACAGCTGTGTTTACAGTTACC
CTATCAACCCCCAAACATGCCAACCCTTAAGCCTTTCTTTGGCTTGACTG
CAGGCAAGCAGCATAAAAGTTTTGATCTGAGTAACGAAAACTTCTAGAAT
CATTTTCCAACACCGGTCTTCTTACATGATTTGAGCACAGGAGCCCATGA
TAATTGTACAAATCATGGCATGGGGCCTCTGTGCTTTGTCATTACTGAAA
TTTTAATGTTGAAAATCACTGTGCCATGACTGATTTCGATTCTACATTGT
TAAATTGTAAAGAGAACCCCTACCTACCTACCAATTTTTTTTTCAGGACT
GTGATTGGAAACACAACATTTTTTTTCCTAGGCCAAAAAAACACATTCCT
CCTTAAAGTTTCAGCCCCGACCCCTTTGTTGAATAGTTGTAACCATCTCC
CTACTAAGCTAGCCTATTCGCACCACATTTGTTATATGGATATGAGGCAG
GCTATTAGCTAGAAGGGCATTGAGATGTTGATCCGATACACACTGGGAAA
ATTTTCCTTGTCTTTGTTGTCTTAGTTTAAGTCTTTGACGTACACCACCT
TTTTTCATGGGTGTAAATAAATAGGCTCTGCATGTCATATGACAGGCGTT
TTATGGCCCATACAAAGACCTACATTCACCCTGGATGTAACGTATGAAGA
ATATGTATGCGCCATAAAATGTCTGTTGTGCGGCCCGCGGGGCCTTTTCA
CACCCATGATAAAAGGCAATGTAGGTCAAAGACATACGTCGTCGTCGTAC
ATCCAGAAAATTTTCCTAGTGTGTCGTCTTCTGGACACCCTAGGAATCCA
TAAGCTCATTGGCAAAGTCTGCCCCCCCTCCCCATCTTAGGACTGTGCCC
TGTCTATAAATCTTAGCTTAAACCCTGTTATAAGGTGAAGCATCAGGGAA
AAGATTGACCTCCCCCCTCCTGCCTCACCACATAATCAATACAAATCTGG
TGCCTAACTGCTACCTTAGGATGCTGAAGGTTAAACAAGGTTTGGTGTTT
CAATATGCAGGTGGCATTCAATGCAATTGTATAACCACCAATCACTGTGC
GCCTGCAATGTCTGTGTTAACCAAAAGGCGGTTCTATTGACTGATTAAGG
CAGTGGCACCAACTGCAGCAGCATATACCAAAGGAATATTATAGTTCCAT
GTAACTTACAAATAAGATACAGTCAAACCTATACCAGTGACCACCTCTAC
ATAAGGACCACCTGGCCAATGTGACTTCTGCTCGATGGTCCTGTGAATAT
TTTTTTCTATTGACAGTCATTAAGGATCTTGTCTATAGTAACCACCTGTC
CATATAGACCAGATTCCATTGATCCCATGTGGTCTTCTTGGGCAGTTTTG
ACTGTAGCTGTGTCTTTTGAACCTTTTAAACTCTTTACGAATATGTTACG
TGTACATTTGCACATTAAATGTGTGGAATACTTGCCAAAGTGGTCACCAT
GCCACAGGTTTGACCGTATTATGTTTTGCTTGATCTTTCAATATGTAACT
TAAGTTACAAACCTTTAAATGTCACATATAAATTTGCATATACGTCTCCT
TGCCAAAGTGCTGCTGTTTTCTTGAGTGCAATGTAGGACATGAGAGATTT
CAACTTTTGTTTAGCTCACATAGCAATGTTTTTTGCTTGTCTGTATGTGT
TTTTCCATTCTCGCATGTTTGTAACATTTTACAAGTTTCCCAACATTTTT
TACTTGTACCATACATGTAAGTATTACTGGTATGTGAGTGGCTATTACTA
GGCATGCCTTCAAAATGAACAATAACAGTATTACCTATTACATGTAGCAG
AAGGCTTGAACAATTTGACTGGATACTATAGGTTTCATATAGGGCTGTGT
ACTTATGTAACATAAGGTACAGGCACCGGTACAAAGGTTTAGGTACAGGT
CCAGACCTGCACCTGTACAATTTGGCCACGGAATAACATATTCAACCATG
ACCAGAAAATGAATAAACAATTAACAGAATGTTTATTTAGACTTCAGGTA
TCTCATACAGAGAACACATGCTTTTCAGCGGATATCAAATGAAAGATGGT
GCGGATTTCAACTACCGCACAGTGTTTTCATCTTCTCCAACTTGGAAAAT
TTTCCTCTTTGTACAAGGAATAATTTGTTTTCAG Coding sequence (CDS) from alignment at Sc0000225:266061..274794+ >BlTCONS00112911 ID=BlTCONS00112911|Name=BlTCONS00112911|organism=Branchiostoma lanceolatum|type=CDS|length=417bp|location=Sequence derived from alignment at Sc0000225:266061..274794+ (Branchiostoma lanceolatum)
ATGCTGCTAAAGAACCCATCCATGATGAAAGTAGGCGACAAGGCAGACAA
CAGGAACTATTGGCTTTTCCCCATACTCGTGGAGAAGCCTGATGAAGTTA
TCGACTCGCTCTGTAAGAAGGGAATCAACGCGTACCGCGGCGCCACGCAG
CTCAACGTCATCGAACCTCACACAGACACGTCGCACCAGCTCAGTGAACA
ACTCACACACTACCCAGAAGAAGCCAGGTTCATCATCGACCATGTTGTGT
ACTTGCCTATCCACAAACGGGTTCCCTACTACTACATTGAAAGGGTTTGT
AAAGGTTTAGAGGAGGTGCTGCAAAAACATGGTACTGTCTTTCAGAAGCC
CTGCTTTGAACGTCCCCTTGTTGTGTTGAATGGGAAACCTGCACCAAAAC
TGCCTTCCAAACTTTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00112911-exon-Sc0000225-1564993656:266061..266150 | BlTCONS00112911-exon-Sc0000225-1564993656:266061..266150 | Branchiostoma lanceolatum | exon |
| BlTCONS00112911-exon-Sc0000225-1564993656:270224..270365 | BlTCONS00112911-exon-Sc0000225-1564993656:270224..270365 | Branchiostoma lanceolatum | exon |
| BlTCONS00112911-exon-Sc0000225-1564993656:271585..274794 | BlTCONS00112911-exon-Sc0000225-1564993656:271585..274794 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000225 | genome | Sc0000225:266061..274794 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055321 |
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