BlTCONS00112892 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00112892
Unique NameBlTCONS00112892
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000225:16835..17568+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00112892 ID=BlTCONS00112892|Name=BlTCONS00112892|organism=Branchiostoma lanceolatum|type=mRNA|length=734bp|location=Sequence derived from alignment at Sc0000225:16835..17568+ (Branchiostoma lanceolatum)
CCTAGCCCTTGCAGACGACATATACCTATTGGCAGGAACAAGGAGAGGTT TACAAGGCATGATTAATACAATAGCTGACTATGGAAGAAGATGGAGATTT CAATTCGCTCCCAACAAAAGCCAATGCATCGTGTTCACACAAGGGAACCA CAGGATGCATAGAATCAACACAGATCCTGAATGGGTGATGGGTGCATCAG AAATCCCAGAAGCACGCACGGTAACACAAGTGGGAATACAGCATTCGTCC AACACAACTTCAGCGGCAGCCATAGAGAGTGCCTGTAGAAAGGGGAAAGG GCGTATCAGTGCCATCTTGTCTACCGGTCTAGAAGGACACACCCCCAACC CACTGGTCACAAAAATACTTTACCACACAATCGTCATACCCAGTATGTTG CACTGTTGTGAATTATGGTACCCTACTCAGACAGACCTGATGAAGTTGGA GAGAGTTCACAGAGGAGGGGTGAAGCGTATGCAGAATATGCACCCACAGG CAGGAACTAGAGAGAGCCTTGGTGCCCTGGGGATGCATACTCTGAAAGCC ATCATGGACAAACACAAGCTGTGTTTCTTCGGTAGGCTTGCCAATCTCCC CTGTACTACACTAGCCAAGAAAGTCTTCCTCTTCAGATTGTATTCGCACA TACTGGCAAGGCCATGCTACACAACATGAGGTTTCATTAGCGACAGCTTC AGAGCAGCCGAAGATTACGGCCTAACAGAGTACC

Coding sequence (CDS) from alignment at Sc0000225:16835..17568+

>BlTCONS00112892 ID=BlTCONS00112892|Name=BlTCONS00112892|organism=Branchiostoma lanceolatum|type=CDS|length=678bp|location=Sequence derived from alignment at Sc0000225:16835..17568+ (Branchiostoma lanceolatum)
CTAGCCCTTGCAGACGACATATACCTATTGGCAGGAACAAGGAGAGGTTT
ACAAGGCATGATTAATACAATAGCTGACTATGGAAGAAGATGGAGATTTC
AATTCGCTCCCAACAAAAGCCAATGCATCGTGTTCACACAAGGGAACCAC
AGGATGCATAGAATCAACACAGATCCTGAATGGGTGATGGGTGCATCAGA
AATCCCAGAAGCACGCACGGTAACACAAGTGGGAATACAGCATTCGTCCA
ACACAACTTCAGCGGCAGCCATAGAGAGTGCCTGTAGAAAGGGGAAAGGG
CGTATCAGTGCCATCTTGTCTACCGGTCTAGAAGGACACACCCCCAACCC
ACTGGTCACAAAAATACTTTACCACACAATCGTCATACCCAGTATGTTGC
ACTGTTGTGAATTATGGTACCCTACTCAGACAGACCTGATGAAGTTGGAG
AGAGTTCACAGAGGAGGGGTGAAGCGTATGCAGAATATGCACCCACAGGC
AGGAACTAGAGAGAGCCTTGGTGCCCTGGGGATGCATACTCTGAAAGCCA
TCATGGACAAACACAAGCTGTGTTTCTTCGGTAGGCTTGCCAATCTCCCC
TGTACTACACTAGCCAAGAAAGTCTTCCTCTTCAGATTGTATTCGCACAT
ACTGGCAAGGCCATGCTACACAACATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00112892-exon-Sc0000225-1564993656:16835..17568BlTCONS00112892-exon-Sc0000225-1564993656:16835..17568Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00112892BlTCONS00112892-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000225genomeSc0000225:16835..17568 +
Properties
Property NameValue
GeneIDBlCUFF055305