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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000119:282502..287906+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00090593 ID=BlTCONS00090593|Name=BlTCONS00090593|organism=Branchiostoma lanceolatum|type=mRNA|length=5405bp|location=Sequence derived from alignment at Sc0000119:282502..287906+ (Branchiostoma lanceolatum)
GTCGACCACTCTTCCAACAGGGTCCCCGTCGCTGTATGACTCCGAGCCTT
TGTGTTCTGATGGACCTGTGTATCAACTCCCGTTACACTGGTAATATCTA
AACCTCCTATTATTTGTAAATCAAACCCATAATCAACCTCGTAAAGTTAG
ACATCATTGTTAGAAATCATTGAGGACCCCATTGAGGTTTAAATTTTGAC
TAAAATTGTTACATTTTTTTCAGGAAAGCATATTCTCACAGTGGGAAGTT
TAGACTTTAAGTAATCTTGACCGGCAATTTTTGGTCAAACTTTTACAGAT
GAATACTGTAAATGTCTCTAACGTTAAAGTTTACTGTGAGTGTGAAGTTG
ATTTTGTGGGAGAAAATTCATGGTGTTCACGGTGGTTTTATGTTCGCGGG
CCGTAGAATCTTAACATTTTTGTTTAAACATTACAAAAGGTACAAACAGC
CAGATATGTGTACAGATGAAGATTATGAAAGGCTGGCCCAAGTATTGCAG
CAGGGAGAGGGGACGAACCAGAAACCAACAGAGACAGAGGGAAACAAACA
GGTTTCTCAGGTTTGGATATCCGGATAGATACTGTGACTACATTCAAGTT
TGCAAGGATTTAATTTCGCTATAGGGAGAGCATAATTTGCTATGGTTTTA
ATTTAAGTTTGTGGTTGAAAAAAGGGGTGGGCGGGTAGAAGATTTTTTGC
GGTGGTTTTTAGTTCTCGGTGAAGACTTTACCGCGAAAACTCCACTATTT
ACAGTATCAATGTTAAAGACTTTTTGACTTTTGTCACTTGTTAAATGTTG
GCACTGCAATTTTGAAAAATAGCTTCAGTTACAGGACAGACAAAAGTCAG
GAATGACTTATACCGACGGTAGTTCTATTAAAAGCAAATGCATCATTGAT
TTTCTTCAGACCTGCTGCTTTATTTATTTATTGTCAAATGCAACAATACA
TTACACCGACTCTCAAGGCAGCGTAGCTGATATTGGAGAGTCGACATGTA
TGGACAGACAGATCATGACATTATTAAAGCAATGGAAAGTTTACACAACA
TGGTTTGCATAGAAACTTACATACAATGACATCTTTTTATTTGACACAGT
CACTTATTTGCTTTACATTTTATACTGTTTTGTACCAATGATTCACAATA
GGCTGGTGAAGAAGAGGTACAGATCCTTGAAGTTCAAGACATTGAAGAGA
AGTCTCAACAGACTTGTACAGAACATGAGGAGGAAAATTGCAGCCAAGGA
GTCGTACCTCTGGACCAAACAGGCTGCTGTCTGGAATATCAGGACATGCA
GGTTCTTCAGTTTCCTCGTTTTGTTTCAAGTGTTACAGACACCAACAACA
GCAAAATCTAGTCTCCAAGCAGACCCAACGGTTGCAAAGACCGTAACCAA
CTGGCAGAAGGAGTTTTTATTGCAACGACGGTGCCTGACAACATCTCTGG
CTGACTGGAGCTTCTCTGGCTAGCTACGATTTTGGCACCGTGGAGATCTG
CTTGGAGATTAAGCAAAATCAAAAATTCCCTGAAATAACATTTAACCATT
ATAATGATATTGATTTATAACAGACATTTGCACAAAATATACACTGGTTC
TGACGTTATTAAGCTTCGAACCATAAAAAGATAATACCTCCAGCTCTTGA
TTCTTCCCACCACCAGGTATAACTAGATTAAACAATGACTATACATTATT
GTCATGTCATAAAACAATATACATCTAAAGTATAGACAGAAAGTATAGAC
AGTTTTCTGGCATTAATTCTATTCCTTTGTTTTACAGTTTTAAACATTAG
ATAGTGGTTTGTCGAACTGCAGGTCTGTGGATATGAGGATACGAACACGG
TGCAAAGTGGACTGACAAACACAGACAACTATTCCCAGGACTGCAGTGTG
GAGGATGAGCAGCTATTACCTGAAGCAGAGACCCTGAGGCAACTAGGTAA
GGACACTTGTGCTCGTTCTCATTTAAATGTACACATTTTGTAATCTCCGT
TACCGTTAAAAGTAAGACGTTCCTGACATTAAGATATGCCACATATAAGG
TACGCAACTGCCGTTTTTAAAAGCTAGAAAAGTTTTAAGTCTTCATAAAA
ACTACAGTTTAACATCTTATATGTGGCATATCCTAATGCCAGGAATGACT
TATTTCAATCGGTAACGGAGATTACCAAATGTGTTCGAGCGAGCGTTGAT
GTGTAGTGCTTTAAGCCATCACACCAAGTGTCAAGTTTCCATAGACTTTG
AATTGCTTCAAAAATCTTATGTGACATTCATACAAAATTTTGATAGGTGT
GCTAATTCAATTTGCCAAAGGAAGTTGACAAAAGTTGGGAGGCTTGGACA
TGTTAAACTCCGGTAACACAGCTGTTTCTAATTTGTGCTCCTCTTTGTAT
ACCTTAAGGCAACAAATTCCATGACTTGTGATTCATTTTTGTGTAACACT
CTGCAGATGGTGTGCTCAGAGAACAAATGAACGAAGAAATTGAACAGTTC
CGGTCCAACTTACATGGTCTTCTGACAGACCACTACCTTCGCCACCGCTA
CATTTTAAACAGTGGGAACATATCTTCAGAAGTAGGTACAAGTTAACCAT
TTTCTGTATTGTGTTGACAGCCACTCGAGGGAGTAGGGCGAATCTACATA
GTGTCATTTCAGTTCATCAGTTCTGTTGCAGCCGGGCTTTTTTAGCCCTC
CTCTTGGCCTCAGCGGCTTAGGCCACACCATTTTAATTTCTTGGTTAACG
GAATTTTTTAAAAAATGCTAGATTGGAAAATCAACATGAAAACAGCATCT
AAGAGGAAAGTTTGTACTTTGGTGCACACAGTTTCAGGGAGTGAACAGAG
TTAGGTACAAGTTTTCACCGCAGCCTTCTGTTTTAAGGATGTCCTTGTGC
TAACATTTAGAAAAGAATCTGTTAACCAAGAAATCAAATTGGTGTGGCCT
TAACCAGTGTTTGTATACTGTAACCCTTATGTCATGAGATCCACTTTTAA
GTACACTTGATAGGTTTATTCTTTGCCACTTCAAGACAACACAAGCATGA
CAAGGGTCTTGTGTCTTATCTACAAGTGGCATCTTGATCTTATCAGTAGA
TTACTCAAGAAGCTTGACGTCTTTTAATTACCTTGGTGTGAAAGGTATTG
TTTACCATTAAGACGTGATAGCTTTTGAGTGGATGTGCTTAAGGACTACA
AAAGAAGAGCTTGTCTATAGAGGTGGAAGTAAAACTTAGTAATCCTTTGG
CCCTGGTAGGTATTAATATAGACACAGTTTGCTGAAACAAGCCCAGGGGT
GCACCCGGGAGAGCCACGACTTCAAGTTTTACACCATCCACGCAAGAACC
AATACATATAAACACTCCTTCTTTCACCATACTATCCCACAGTGGAACAC
CCTGCCTGGCACGGTTGCGACGGCTCCCACAGTTGAGTCGTTCCCAGTGC
CAGGCTGGAGGCCTGCCCGCCTTAGCCCGGGACTTCAACTCCCCCCCCCT
ACTTTGCCCCTGAAGGGGCTATTTGGGGGTATAGAAATGTAGATGTAGAT
GTATCTTTATAATCCATACATCAGACCACAGTTCAAAGAGAAGTAAAGGT
GGTCAGGTGCCTAAGGCTATTCATGCCTCAAGTTGTATGTATTTACACTG
AAGAAAAGCTTATGAAGTGACACAGTGGATCCATGCTGTTAATGTTACCC
AGGTGCCGTGTGGACCACCCTCAGCAGTCCCTATGAATGACAGTCTGTGT
AGCTCAGGTGAGAAATTAATTAGACTCTCTACCTTTTGATACATATTTCT
TCTGTATACTTTAAGTGCCTAGGATTCTAAGCAATTCTCCCTATCTTTTA
CTGAGAATAAGGTAACGAATTGAATTGCAAACATTTTTGTGCTCACTCAT
TTGCATTTTAGGGTCAGAAGCATGTGCAACACCTGAATCACAGCCATCCG
ACAATGAGAATAGATACAGGTAAGGTCAATTCGGATCCAGCTGCAGGTTG
TTAAAGATTTAACTGTTGTTTTTTAAGATATTGATATCATCATTTGATAA
ATATATGCTGCTCATTATAATAGTTATATAATATTTATAATATTTTTTAT
AATTGTGATATTGTGTCAATTATATAATTTTTTAATCTATAACATATCTA
TTATATAATTGTAGTACATTGCATCAGTTCCTTGGATATTGATATCATCA
TTTGATGAATATATGCTGCTCATTATAATGATTATACAACATTTATAATA
TTTTCTTATAATTGTAATATTGTATCAATTATATAATTTTTAAATCTATA
ACATTTTAATAATTATATAATTGTAGTACATTGCATCAGTTCCTTGATTT
GAGGCAAAAGCTTGATTCTAAAGTTATAATGAATCTGATATATGTTTAGA
TATGTTCAAGGTAACATAAGGCCACACCATTTTAATTTCTTGGTTAACGG
AATTTAAAAGAAAATGCTAGATTGGAATATGAACAGGAAAACAGAATCTC
AGAGGAAAGTTTGTACTTTGGTGCACACAGTTTCAGGGAGTGAACAGGGT
CAGGTGCAAGTTTTCACCCCAGCCTTCTGTTTTCATGATTTTTTTGCTAA
AATTTAAAAAAGAAATCCGTTAACCAAGAAATTAAATTGGTGTGGCCTAA
GTGTGGCACCTGTCAAAAACTGTTGAATATAAAATGGCCCTGATCAGTGT
TGTGCCTATATATTTTTTTTGTAAGTTTTCTTCTTCCAATGTTATTTATT
TTCAGACACATGTATATGTCTACATATTAACCTAAATAGAAATGTTCAAA
GTTGTCATGTACTTTTTTCAAGGTAGGATGTAAACAAAGGAATCTAGCCT
ATTAATTTATGAAGATTGTTCCATGTTTTTCAATGTGTGTTTTCTTTATA
AGATTGAACCATGACATTTTTCATTCTGTGCTTGTACACTTAATAGCATG
GACATAGCAGCCACTGTACCAGACAGACGACAAGAGGAACATATGAAACA
ACAATATCTCATCTCTATGCTCACATCTGCCAGCATCATCACCAGTGCAC
TAAGGAAGAAGGAATTCTCTGTTTGATGAACAACCATACTGATGACATTC
ATATTTCTTTTAATTGTCATTAGACATTGAACATTTTACAGTTGATGTTA
GAATGTATTTATTAAAACTTCAAGTTTAACAGCTAACGTTAGCCTGAATG
GGGTTTAAAATAAAATGATGATGACATGGTAACTTTATGACACCCATGAT
GTGATAGCTGAACAATTACAGGTTTGCGTAGCAAAACCTTTCTTGGATCC
GTTGGCATGTGTGGTGGCCGCCATCTTGATTTTGTGACGTGGCAGGGTAG
CCATACCATTTCATTGGGAGGGGTGTTTTTTTAGGGTCGCTAGCGGTCTC
TCTTA Coding sequence (CDS) from alignment at Sc0000119:282502..287906+ >BlTCONS00090593 ID=BlTCONS00090593|Name=BlTCONS00090593|organism=Branchiostoma lanceolatum|type=CDS|length=852bp|location=Sequence derived from alignment at Sc0000119:282502..287906+ (Branchiostoma lanceolatum)
TCGACCACTCTTCCAACAGGGTCCCCGTCGCTGTATGACTCCGAGCCTTT
GTGTTCTGATGGACCTGTGTATCAACTCCCGTTACACTGGTACAAACAGC
CAGATATGTGTACAGATGAAGATTATGAAAGGCTGGCCCAAGTATTGCAG
CAGGGAGAGGGGACGAACCAGAAACCAACAGAGACAGAGGGAAACAAACA
GGTTTCTCAGGCTGGTGAAGAAGAGGTACAGATCCTTGAAGTTCAAGACA
TTGAAGAGAAGTCTCAACAGACTTGTACAGAACATGAGGAGGAAAATTGC
AGCCAAGGAGTCGTACCTCTGGACCAAACAGGCTGCTGTCTGGAATATCA
GGACATGCAGGTCTGTGGATATGAGGATACGAACACGGTGCAAAGTGGAC
TGACAAACACAGACAACTATTCCCAGGACTGCAGTGTGGAGGATGAGCAG
CTATTACCTGAAGCAGAGACCCTGAGGCAACTAGATGGTGTGCTCAGAGA
ACAAATGAACGAAGAAATTGAACAGTTCCGGTCCAACTTACATGGTCTTC
TGACAGACCACTACCTTCGCCACCGCTACATTTTAAACAGTGGGAACATA
TCTTCAGAAGTGCCGTGTGGACCACCCTCAGCAGTCCCTATGAATGACAG
TCTGTGTAGCTCAGGGTCAGAAGCATGTGCAACACCTGAATCACAGCCAT
CCGACAATGAGAATAGATACAGCATGGACATAGCAGCCACTGTACCAGAC
AGACGACAAGAGGAACATATGAAACAACAATATCTCATCTCTATGCTCAC
ATCTGCCAGCATCATCACCAGTGCACTAAGGAAGAAGGAATTCTCTGTTT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00090593-exon-Sc0000119-1564993656:282502..282591 | BlTCONS00090593-exon-Sc0000119-1564993656:282502..282591 | Branchiostoma lanceolatum | exon |
| BlTCONS00090593-exon-Sc0000119-1564993656:282941..283061 | BlTCONS00090593-exon-Sc0000119-1564993656:282941..283061 | Branchiostoma lanceolatum | exon |
| BlTCONS00090593-exon-Sc0000119-1564993656:283653..283802 | BlTCONS00090593-exon-Sc0000119-1564993656:283653..283802 | Branchiostoma lanceolatum | exon |
| BlTCONS00090593-exon-Sc0000119-1564993656:284324..284447 | BlTCONS00090593-exon-Sc0000119-1564993656:284324..284447 | Branchiostoma lanceolatum | exon |
| BlTCONS00090593-exon-Sc0000119-1564993656:284958..285082 | BlTCONS00090593-exon-Sc0000119-1564993656:284958..285082 | Branchiostoma lanceolatum | exon |
| BlTCONS00090593-exon-Sc0000119-1564993656:286204..286258 | BlTCONS00090593-exon-Sc0000119-1564993656:286204..286258 | Branchiostoma lanceolatum | exon |
| BlTCONS00090593-exon-Sc0000119-1564993656:286413..286470 | BlTCONS00090593-exon-Sc0000119-1564993656:286413..286470 | Branchiostoma lanceolatum | exon |
| BlTCONS00090593-exon-Sc0000119-1564993656:287448..287906 | BlTCONS00090593-exon-Sc0000119-1564993656:287448..287906 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000119 | genome | Sc0000119:282502..287906 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF043979 |
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